RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 IGDCC4Q8TDY8 1250 aa16.44■□□□□ 0.22
VPS11-205ENST00000534551 GTF3C2Q8WUA4 911 aaPredicted RBP16.44■□□□□ 0.22
VPS11-205ENST00000534551 KCNB2Q92953 911 aa16.44■□□□□ 0.22
VPS11-205ENST00000534551 NEK1Q96PY6 1258 aa16.44■□□□□ 0.22
VPS11-205ENST00000534551 SPATC1LQ9H0A9 340 aa16.44■□□□□ 0.22
VPS11-205ENST00000534551 FEM1BQ9UK73 627 aa16.44■□□□□ 0.22
VPS11-205ENST00000534551 ZNF214Q9UL59 606 aaPredicted RBP16.44■□□□□ 0.22
VPS11-205ENST00000534551 MCM3APO60318 1980 aa16.44■□□□□ 0.22
VPS11-205ENST00000534551 RXRAP19793 462 aa16.43■□□□□ 0.22
VPS11-205ENST00000534551 MCM5P33992 734 aa16.43■□□□□ 0.22
VPS11-205ENST00000534551 NT5C2P49902 561 aa16.43■□□□□ 0.22
VPS11-205ENST00000534551 CPXCR1Q8N123 301 aa16.43■□□□□ 0.22
VPS11-205ENST00000534551 RAVER2Q9HCJ3 691 aaKnown RBP16.43■□□□□ 0.22
VPS11-205ENST00000534551 HOXC10Q9NYD6 342 aa16.43■□□□□ 0.22
VPS11-205ENST00000534551 PRR12Q9ULL5 1215 aa16.43■□□□□ 0.22
VPS11-205ENST00000534551 PTPN22Q9Y2R2 807 aa16.43■□□□□ 0.22
VPS11-205ENST00000534551 RIPK3Q9Y572 518 aa16.43■□□□□ 0.22
VPS11-205ENST00000534551 ZKSCAN1P17029 563 aaPredicted RBP16.42■□□□□ 0.22
VPS11-205ENST00000534551 SLC4A3P48751 1232 aa16.42■□□□□ 0.22
VPS11-205ENST00000534551 TSGA10IPQ3SY00 556 aa16.42■□□□□ 0.22
VPS11-205ENST00000534551 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
VPS11-205ENST00000534551 SYDE2Q5VT97 1194 aa16.42■□□□□ 0.22
VPS11-205ENST00000534551 CCDC174Q6PII3 467 aa16.42■□□□□ 0.22
VPS11-205ENST00000534551 GPR142Q7Z601 462 aa16.42■□□□□ 0.22
VPS11-205ENST00000534551 STAG2Q8N3U4 1231 aa16.42■□□□□ 0.22
VPS11-205ENST00000534551 UBA5Q9GZZ9 404 aa16.42■□□□□ 0.22
VPS11-205ENST00000534551 SLC38A10Q9HBR0 1119 aa16.42■□□□□ 0.22
VPS11-205ENST00000534551 SRRDQ9UH36 339 aa16.42■□□□□ 0.22
VPS11-205ENST00000534551 FRMPD3Q5JV73 1810 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 ERICH2A1L162 156 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 ERCC3P19447 782 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 FLT3LGP49771 235 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 SART3Q15020 963 aaKnown RBP16.41■□□□□ 0.22
VPS11-205ENST00000534551 SLC35G1Q2M3R5 365 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
VPS11-205ENST00000534551 FBXO46Q6PJ61 603 aaPredicted RBP16.41■□□□□ 0.22
VPS11-205ENST00000534551 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 NCAPG2Q86XI2 1143 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 ZNF654Q8IZM8 581 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 MB21D1Q8N884 522 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 PRPF38AQ8NAV1 312 aaKnown RBP16.41■□□□□ 0.22
VPS11-205ENST00000534551 HPS5Q9UPZ3 1129 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 ZNF536O15090 1300 aa16.41■□□□□ 0.22
VPS11-205ENST00000534551 LRRC37A2A6NM11 1700 aa16.4■□□□□ 0.22
VPS11-205ENST00000534551 CASTP20810 708 aaKnown RBP16.4■□□□□ 0.22
VPS11-205ENST00000534551 KRT32Q14532 448 aa16.4■□□□□ 0.22
VPS11-205ENST00000534551 GRM4Q14833 912 aa16.4■□□□□ 0.22
VPS11-205ENST00000534551 CCDC144CPQ8IYA2 1237 aa16.4■□□□□ 0.22
VPS11-205ENST00000534551 SH3TC2Q8TF17 1288 aa16.4■□□□□ 0.22
VPS11-205ENST00000534551 NUP133Q8WUM0 1156 aa16.4■□□□□ 0.22
VPS11-205ENST00000534551 HOMER2Q9NSB8 354 aa16.4■□□□□ 0.22
VPS11-205ENST00000534551 MYCP01106 439 aaPredicted RBP16.39■□□□□ 0.21
VPS11-205ENST00000534551 PARP1P09874 1014 aaKnown RBP16.39■□□□□ 0.21
VPS11-205ENST00000534551 ELNP15502 786 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 MAPK4P31152 587 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 CCNA1P78396 465 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 EXOSC10Q01780 885 aaKnown RBP16.39■□□□□ 0.21
VPS11-205ENST00000534551 ASPRV1Q53RT3 343 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 BTNL9Q6UXG8 535 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 NFXL1Q6ZNB6 911 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 DHX32Q7L7V1 743 aaKnown RBP16.39■□□□□ 0.21
VPS11-205ENST00000534551 PLEKHH3Q7Z736 793 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 RIOX2Q8IUF8 465 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 CCAR1Q8IX12 1150 aaKnown RBP16.39■□□□□ 0.21
VPS11-205ENST00000534551 CHURC1Q8WUH1 139 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 COA7Q96BR5 231 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 ABHD8Q96I13 439 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 TMEM87BQ96K49 555 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 AGBL1Q96MI9 1066 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 UPF3BQ9BZI7 483 aaKnown RBP16.39■□□□□ 0.21
VPS11-205ENST00000534551 RANBP17Q9H2T7 1088 aaKnown RBP16.39■□□□□ 0.21
VPS11-205ENST00000534551 CWC22Q9HCG8 908 aaKnown RBP16.39■□□□□ 0.21
VPS11-205ENST00000534551 MAD2L2Q9UI95 211 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 GJD2Q9UKL4 321 aa16.39■□□□□ 0.21
VPS11-205ENST00000534551 PLA2G6O60733 806 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 ZBED4O75132 1171 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 CYP2B6P20813 491 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 RPS6KB1P23443 525 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 STAT3P40763 770 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 TROAPQ12815 778 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 MORN1Q5T089 497 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 NBPF11Q86T75 865 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 MICU3Q86XE3 530 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 RAET1EQ8TD07 263 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 TEX13BQ9BXU2 312 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 BRPF3Q9ULD4 1205 aa16.38■□□□□ 0.21
VPS11-205ENST00000534551 EPB41L2O43491 1005 aaKnown RBP16.37■□□□□ 0.21
VPS11-205ENST00000534551 PTPREP23469 700 aa16.37■□□□□ 0.21
VPS11-205ENST00000534551 GRB14Q14449 540 aa16.37■□□□□ 0.21
VPS11-205ENST00000534551 CCL14Q16627 93 aa16.37■□□□□ 0.21
VPS11-205ENST00000534551 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
VPS11-205ENST00000534551 Q6ZUG5 572 aa16.37■□□□□ 0.21
VPS11-205ENST00000534551 CATIPQ7Z7H3 387 aa16.37■□□□□ 0.21
VPS11-205ENST00000534551 SHCBP1Q8NEM2 672 aa16.37■□□□□ 0.21
VPS11-205ENST00000534551 SOCS4Q8WXH5 440 aa16.37■□□□□ 0.21
VPS11-205ENST00000534551 CTDP1Q9Y5B0 961 aaPredicted RBP16.37■□□□□ 0.21
VPS11-205ENST00000534551 WDR19Q8NEZ3 1342 aa16.37■□□□□ 0.21
VPS11-205ENST00000534551 PALM3A6NDB9 673 aaPredicted RBP16.36■□□□□ 0.21
VPS11-205ENST00000534551 CCDC69A6NI79 296 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms