RNA–Protein interactions for RNA: ENST00000534171.5

ALKBH3-212, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 5

Gene ALKBH3, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-212ENST00000534171 SNX17Q15036 470 aa17.79■□□□□ 0.44
ALKBH3-212ENST00000534171 FAM47AQ5JRC9 791 aa17.79■□□□□ 0.44
ALKBH3-212ENST00000534171 SNRNP48Q6IEG0 339 aaKnown RBP17.79■□□□□ 0.44
ALKBH3-212ENST00000534171 GMCL1P1Q8NEA9 526 aa17.79■□□□□ 0.44
ALKBH3-212ENST00000534171 NEDD1Q8NHV4 660 aa17.79■□□□□ 0.44
ALKBH3-212ENST00000534171 FEM1BQ9UK73 627 aa17.79■□□□□ 0.44
ALKBH3-212ENST00000534171 CUL9Q8IWT3 2517 aa17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 SALL3Q9BXA9 1300 aa17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 ADCYAP1R1P41586 468 aa17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 C1orf53Q5VUE5 145 aa17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 NAPBQ9H115 298 aa17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 SLC38A10Q9HBR0 1119 aa17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 XPNPEP3Q9NQH7 507 aa17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 PRKAG2Q9UGJ0 569 aa17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 ATP11BQ9Y2G3 1177 aa17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 RIPK3Q9Y572 518 aa17.78■□□□□ 0.44
ALKBH3-212ENST00000534171 DNAJC25-GNG10A0A024R161 153 aa17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 MYCNP04198 464 aaPredicted RBP17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 ZNF865P0CJ78 1059 aaPredicted RBP17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 TSPY3P0CV98 308 aa17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 TSPY8P0CW00 308 aa17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 TAL1P17542 331 aaPredicted RBP17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 PPARAQ07869 468 aa17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 KIFC2Q96AC6 838 aa17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 PHF24Q9UPV7 400 aa17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 CNPY2Q9Y2B0 182 aa17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 CTDP1Q9Y5B0 961 aaPredicted RBP17.77■□□□□ 0.44
ALKBH3-212ENST00000534171 SYNGAP1Q96PV0 1343 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 FDX1P10109 184 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 OAZ1P54368 228 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 TFAP4Q01664 338 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 PPP4R3BQ5MIZ7 849 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 SLFN13Q68D06 897 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 MAMDC4Q6UXC1 1216 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 ZNF467Q7Z7K2 595 aaPredicted RBP17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 RNF180Q86T96 592 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 CPXCR1Q8N123 301 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 LRRC47Q8N1G4 583 aaKnown RBP17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 DEFB123Q8N688 67 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 DDX11Q96FC9 970 aa17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
ALKBH3-212ENST00000534171 FOXP2O15409 715 aa17.75■□□□□ 0.43
ALKBH3-212ENST00000534171 BMP3P12645 472 aa17.75■□□□□ 0.43
ALKBH3-212ENST00000534171 AKR1A1P14550 325 aa17.75■□□□□ 0.43
ALKBH3-212ENST00000534171 TRIM60Q495X7 471 aa17.75■□□□□ 0.43
ALKBH3-212ENST00000534171 ANKRD45Q5TZF3 282 aa17.75■□□□□ 0.43
ALKBH3-212ENST00000534171 CHST13Q8NET6 341 aa17.75■□□□□ 0.43
ALKBH3-212ENST00000534171 FERMT2Q96AC1 680 aa17.75■□□□□ 0.43
ALKBH3-212ENST00000534171 RAVER2Q9HCJ3 691 aaKnown RBP17.75■□□□□ 0.43
ALKBH3-212ENST00000534171 FBXO40Q9UH90 709 aa17.75■□□□□ 0.43
ALKBH3-212ENST00000534171 SNAI1O95863 264 aaPredicted RBP17.74■□□□□ 0.43
ALKBH3-212ENST00000534171 PGK1P00558 417 aa17.74■□□□□ 0.43
ALKBH3-212ENST00000534171 HDAC1Q13547 482 aaPredicted RBP17.74■□□□□ 0.43
ALKBH3-212ENST00000534171 EVI5LQ96CN4 794 aa17.74■□□□□ 0.43
ALKBH3-212ENST00000534171 GMCL1Q96IK5 515 aa17.74■□□□□ 0.43
ALKBH3-212ENST00000534171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.74■□□□□ 0.43
ALKBH3-212ENST00000534171 LTBP2Q14767 1821 aa17.74■□□□□ 0.43
ALKBH3-212ENST00000534171 MCM3APO60318 1980 aa17.73■□□□□ 0.43
ALKBH3-212ENST00000534171 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
ALKBH3-212ENST00000534171 CCDC129Q6ZRS4 1044 aa17.73■□□□□ 0.43
ALKBH3-212ENST00000534171 TICAM2Q86XR7 235 aa17.73■□□□□ 0.43
ALKBH3-212ENST00000534171 CHURC1Q8WUH1 139 aa17.73■□□□□ 0.43
ALKBH3-212ENST00000534171 CRBNQ96SW2 442 aa17.73■□□□□ 0.43
ALKBH3-212ENST00000534171 TSEN34Q9BSV6 310 aaKnown RBP17.73■□□□□ 0.43
ALKBH3-212ENST00000534171 PDLIM7Q9NR12 457 aa17.73■□□□□ 0.43
ALKBH3-212ENST00000534171 ANAPC4Q9UJX5 808 aa17.73■□□□□ 0.43
ALKBH3-212ENST00000534171 FAM184BQ9ULE4 1060 aa17.73■□□□□ 0.43
ALKBH3-212ENST00000534171 TMEM232C9JQI7 657 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 PLA2G6O60733 806 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 ADAMTS4O75173 837 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 STAT2P52630 851 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 PDE1AP54750 535 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 TLE2Q04725 743 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 ALX1Q15699 326 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 Q7L0L9 218 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 FAM160B2Q86V87 743 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 ANKRD35Q8N283 1001 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 STAG1Q8WVM7 1258 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 PRDM5Q9NQX1 630 aaPredicted RBP17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 MTMR10Q9NXD2 777 aa17.72■□□□□ 0.43
ALKBH3-212ENST00000534171 UNC80Q8N2C7 3258 aa17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 TSPY2A6NKD2 308 aa17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 DLL1O00548 723 aa17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 SLC1A4P43007 532 aa17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 FAM109BQ6ICB4 259 aaPredicted RBP17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 LENG1Q96BZ8 264 aaPredicted RBP17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 FGD4Q96M96 766 aa17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 IL17RBQ9NRM6 502 aa17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 HELLSQ9NRZ9 838 aa17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 TACC3Q9Y6A5 838 aa17.71■□□□□ 0.43
ALKBH3-212ENST00000534171 SYNRGQ9UMZ2 1314 aa17.71■□□□□ 0.42
ALKBH3-212ENST00000534171 A0A1W2PQ45 241 aaPredicted RBP17.7■□□□□ 0.42
ALKBH3-212ENST00000534171 A0A1W2PQY0 241 aa17.7■□□□□ 0.42
ALKBH3-212ENST00000534171 TRIM43BA6NCK2 446 aa17.7■□□□□ 0.42
ALKBH3-212ENST00000534171 ORC4O43929 436 aa17.7■□□□□ 0.42
ALKBH3-212ENST00000534171 DUSP11O75319 330 aaKnown RBP17.7■□□□□ 0.42
ALKBH3-212ENST00000534171 MCCP23508 829 aa17.7■□□□□ 0.42
ALKBH3-212ENST00000534171 NOVP48745 357 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms