RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 LZTS2Q9BRK4 669 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 GPCPD1Q9NPB8 672 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 PRDM10Q9NQV6 1147 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 GPHNQ9NQX3 736 aaPredicted RBP13.75□□□□□ -0.21
CTSC-209ENST00000534131 FRMPD2Q68DX3 1309 aaPredicted RBP13.74□□□□□ -0.21
CTSC-209ENST00000534131 MYPNQ86TC9 1320 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 GOLGA8AA7E2F4 631 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 GOLGA8BA8MQT2 603 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
CTSC-209ENST00000534131 PLA2G6O60733 806 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 ZBED4O75132 1171 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 SNHG28P0DPA3 235 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 ZNF543Q08ER8 600 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 TROAPQ12815 778 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 DGKZQ13574 1117 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 TOB2Q14106 344 aaPredicted RBP13.74□□□□□ -0.21
CTSC-209ENST00000534131 GRM4Q14833 912 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 RTN1Q16799 776 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 GPAT2Q6NUI2 795 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 FANCBQ8NB91 859 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 KIF2CQ99661 725 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 SLF1Q9BQI6 1058 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 SLKQ9H2G2 1235 aaPredicted RBP13.74□□□□□ -0.21
CTSC-209ENST00000534131 SENP2Q9HC62 589 aa13.74□□□□□ -0.21
CTSC-209ENST00000534131 KLRF2D3W0D1 207 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 IGF2BP3O00425 579 aaKnown RBP eCLIP13.73□□□□□ -0.21
CTSC-209ENST00000534131 GCLCP48506 637 aaPredicted RBP13.73□□□□□ -0.21
CTSC-209ENST00000534131 MOGSQ13724 837 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 KIAA1755Q5JYT7 1200 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 CHRDL2Q6WN34 429 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 NOL8Q76FK4 1167 aaKnown RBP13.73□□□□□ -0.21
CTSC-209ENST00000534131 FAM43AQ8N2R8 423 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 MB21D1Q8N884 522 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 KIFC2Q96AC6 838 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 ZIC5Q96T25 663 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 NUP88Q99567 741 aaPredicted RBP13.73□□□□□ -0.21
CTSC-209ENST00000534131 PTPN18Q99952 460 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 ASCC2Q9H1I8 757 aaPredicted RBP13.73□□□□□ -0.21
CTSC-209ENST00000534131 BRPF3Q9ULD4 1205 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 LIMCH1Q9UPQ0 1083 aa13.73□□□□□ -0.21
CTSC-209ENST00000534131 RLFQ13129 1914 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 PALM3A6NDB9 673 aaPredicted RBP13.72□□□□□ -0.21
CTSC-209ENST00000534131 CPLX1O14810 134 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 CA12O43570 354 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 GOLGA8HP0CJ92 632 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 SMARCA1P28370 1054 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 EVCP57679 992 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 TRAF1Q13077 416 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 COL9A3Q14050 684 aaPredicted RBP13.72□□□□□ -0.21
CTSC-209ENST00000534131 SYDE2Q5VT97 1194 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 CCDC144CPQ8IYA2 1237 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 P2RX7Q99572 595 aaKnown RBP13.72□□□□□ -0.21
CTSC-209ENST00000534131 MYL10Q9BUA6 226 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 SH2B1Q9NRF2 756 aaPredicted RBP13.72□□□□□ -0.21
CTSC-209ENST00000534131 MAD2L2Q9UI95 211 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 TSKSQ9UJT2 592 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 PNMA2Q9UL42 364 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 PPP1R9AQ9ULJ8 1098 aa13.72□□□□□ -0.21
CTSC-209ENST00000534131 BAZ2BQ9UIF8 2168 aaKnown RBP13.72□□□□□ -0.21
CTSC-209ENST00000534131 CDKL5O76039 1030 aa13.71□□□□□ -0.21
CTSC-209ENST00000534131 RXRAP19793 462 aa13.71□□□□□ -0.21
CTSC-209ENST00000534131 PDIA3P30101 505 aaKnown RBP13.71□□□□□ -0.21
CTSC-209ENST00000534131 HERVK_113P62684 666 aa13.71□□□□□ -0.21
CTSC-209ENST00000534131 AKAP17AQ02040 695 aaKnown RBP13.71□□□□□ -0.21
CTSC-209ENST00000534131 STK3Q13188 491 aa13.71□□□□□ -0.21
CTSC-209ENST00000534131 BTNL9Q6UXG8 535 aa13.71□□□□□ -0.21
CTSC-209ENST00000534131 RAB11FIP4Q86YS3 637 aa13.71□□□□□ -0.21
CTSC-209ENST00000534131 UBA5Q9GZZ9 404 aa13.71□□□□□ -0.21
CTSC-209ENST00000534131 SAGE1Q9NXZ1 904 aa13.71□□□□□ -0.21
CTSC-209ENST00000534131 MGAMO43451 1857 aa13.71□□□□□ -0.21
CTSC-209ENST00000534131 TLR2O60603 784 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 TRPA1O75762 1119 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 CYP2C8P10632 490 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 CCT2P78371 535 aaKnown RBP13.7□□□□□ -0.22
CTSC-209ENST00000534131 CCNA1P78396 465 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 TTBK2Q6IQ55 1244 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 LBX2Q6XYB7 198 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 CCAR1Q8IX12 1150 aaKnown RBP13.7□□□□□ -0.22
CTSC-209ENST00000534131 STAG2Q8N3U4 1231 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 LARP6Q9BRS8 491 aaKnown RBP13.7□□□□□ -0.22
CTSC-209ENST00000534131 CWC22Q9HCG8 908 aaKnown RBP13.7□□□□□ -0.22
CTSC-209ENST00000534131 VAT1LQ9HCJ6 419 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 RNF186Q9NXI6 227 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
CTSC-209ENST00000534131 SEC63Q9UGP8 760 aaKnown RBP13.7□□□□□ -0.22
CTSC-209ENST00000534131 PRR12Q9ULL5 1215 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 RABGAP1Q9Y3P9 1069 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 CASP8AP2Q9UKL3 1982 aa13.7□□□□□ -0.22
CTSC-209ENST00000534131 ZNFX1Q9P2E3 1918 aaKnown RBP13.7□□□□□ -0.22
CTSC-209ENST00000534131 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
CTSC-209ENST00000534131 PFKFB2O60825 505 aa13.69□□□□□ -0.22
CTSC-209ENST00000534131 COPB2P35606 906 aa13.69□□□□□ -0.22
CTSC-209ENST00000534131 SLC16A2P36021 539 aa13.69□□□□□ -0.22
CTSC-209ENST00000534131 PLS1Q14651 629 aa13.69□□□□□ -0.22
CTSC-209ENST00000534131 TRIM22Q8IYM9 498 aa13.69□□□□□ -0.22
CTSC-209ENST00000534131 ADGRF4Q8IZF3 695 aa13.69□□□□□ -0.22
CTSC-209ENST00000534131 ATG4CQ96DT6 458 aa13.69□□□□□ -0.22
CTSC-209ENST00000534131 RRP36Q96EU6 259 aaKnown RBP13.69□□□□□ -0.22
CTSC-209ENST00000534131 PAGR1Q9BTK6 254 aa13.69□□□□□ -0.22
CTSC-209ENST00000534131 SPZ1Q9BXG8 430 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms