RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 RHOBTB3O94955 611 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 PPP4R3BQ5MIZ7 849 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 GIMAP8Q8ND71 665 aaPredicted RBP8.14□□□□□ -1.11
RNPC3-209ENST00000533834 P2RX7Q99572 595 aaKnown RBP8.14□□□□□ -1.11
RNPC3-209ENST00000533834 TMEM47Q9BQJ4 181 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 DNAJC18Q9H819 358 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 ADGRG1Q9Y653 693 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 ESYT2A0FGR8 921 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 USP17L3A6NCW0 530 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 USP17L4A6NCW7 530 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 TRIM75PA6NK02 468 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 ARHGAP6O43182 974 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 MFAP3LO75121 409 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 GTF2E1P29083 439 aaPredicted RBP8.14□□□□□ -1.11
RNPC3-209ENST00000533834 NFXL1Q6ZNB6 911 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 USP17L1Q7RTZ2 530 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 SMYD4Q8IYR2 804 aaPredicted RBP8.14□□□□□ -1.11
RNPC3-209ENST00000533834 SLC44A5Q8NCS7 719 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 CCDC112Q8NEF3 446 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 DNAJC7Q99615 494 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 FEZ1Q99689 392 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 PCDHA2Q9Y5H9 948 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.14□□□□□ -1.11
RNPC3-209ENST00000533834 MYO3BQ8WXR4 1341 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 SASH3O75995 380 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 LONP1P36776 959 aaKnown RBP8.14□□□□□ -1.11
RNPC3-209ENST00000533834 PTPN14Q15678 1187 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 FOXR2Q6PJQ5 311 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 SIAH1Q8IUQ4 282 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 NEDD1Q8NHV4 660 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 MBOAT7Q96N66 472 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 RAI14Q9P0K7 980 aa8.14□□□□□ -1.11
RNPC3-209ENST00000533834 PLA2G4AP47712 749 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 RBL2Q08999 1139 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 DIXDC1Q155Q3 683 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 CAVIN4Q5BKX8 364 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 ZNF658Q5TYW1 1059 aaPredicted RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 KANK3Q6NY19 840 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 DISC1Q9NRI5 854 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 BLOC1S4Q9NUP1 217 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 ATF5Q9Y2D1 282 aaPredicted RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 DOCK5Q9H7D0 1870 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 MINDY4BA8MYZ0 360 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 GTPBP6O43824 516 aaPredicted RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 ZBTB48P10074 688 aaPredicted RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 DHX8Q14562 1220 aaKnown RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 KRT31Q15323 416 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 TPD52L1Q16890 204 aaPredicted RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 GPR101Q96P66 508 aaPredicted RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 PNMA5Q96PV4 448 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 CD209Q9NNX6 404 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 DDX4Q9NQI0 724 aaKnown RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 TRMT1Q9NXH9 659 aaKnown RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 SYNRGQ9UMZ2 1314 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 SOWAHDA6NJG2 315 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 PP2D1A8MPX8 630 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 LCA5LO95447 670 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 PRCPP42785 496 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 HYIQ5T013 277 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 CATIPQ7Z7H3 387 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 NUTM2AQ8IVF1 878 aaPredicted RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 BLIDQ8IZY5 108 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 UBAC1Q9BSL1 405 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 NAP1L2Q9ULW6 460 aaPredicted RBP8.13□□□□□ -1.11
RNPC3-209ENST00000533834 CEP131Q9UPN4 1083 aa8.13□□□□□ -1.11
RNPC3-209ENST00000533834 BMP15O95972 392 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 SART3Q15020 963 aaKnown RBP8.12□□□□□ -1.11
RNPC3-209ENST00000533834 ZNF174Q15697 407 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 ELF2Q15723 593 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 ZCWPW2Q504Y3 356 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 TCP11X2Q5H9J9 407 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 SYT10Q6XYQ8 523 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 CCDC24Q8N4L8 307 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 KIAA0895Q8NCT3 520 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 SMARCE1Q969G3 411 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 ANKZF1Q9H8Y5 726 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 ABCF2Q9UG63 623 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 ATRNL1Q5VV63 1379 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 BECN2A8MW95 431 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 KIF2AO00139 706 aaPredicted RBP8.12□□□□□ -1.11
RNPC3-209ENST00000533834 GNPATO15228 680 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 SLU7O95391 586 aaKnown RBP8.12□□□□□ -1.11
RNPC3-209ENST00000533834 USP5P45974 858 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 ADKP55263 362 aaKnown RBP8.12□□□□□ -1.11
RNPC3-209ENST00000533834 PLCB2Q00722 1185 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 RRP12Q5JTH9 1297 aaKnown RBP8.12□□□□□ -1.11
RNPC3-209ENST00000533834 CPLX2Q6PUV4 134 aaKnown RBP8.12□□□□□ -1.11
RNPC3-209ENST00000533834 CCDC82Q8N4S0 544 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 PNMA1Q8ND90 353 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 TBC1D16Q8TBP0 767 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 FBXW7Q969H0 707 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 NLRP3Q96P20 1036 aa8.12□□□□□ -1.11
RNPC3-209ENST00000533834 CRNKL1Q9BZJ0 848 aaKnown RBP8.12□□□□□ -1.11
RNPC3-209ENST00000533834 GNL3LQ9NVN8 582 aaKnown RBP8.12□□□□□ -1.11
RNPC3-209ENST00000533834 HNRNPH3P31942 346 aaKnown RBP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 MCCD1P59942 119 aaPredicted RBP8.11□□□□□ -1.11
RNPC3-209ENST00000533834 TMEM119Q4V9L6 283 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 GALNT17Q6IS24 598 aa8.11□□□□□ -1.11
RNPC3-209ENST00000533834 ZNF572Q7Z3I7 529 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms