RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PLIN4Q96Q06 1357 aa12.72□□□□□ -0.37
CCDC90B-218ENST00000533761 MYH8P13535 1937 aa12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 GDF11O95390 407 aa12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 GH2P01242 217 aa12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 RRP1BQ14684 758 aaKnown RBP12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 TRIM22Q8IYM9 498 aa12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 ZNF654Q8IZM8 581 aa12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 NEDD1Q8NHV4 660 aa12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 WASF1Q92558 559 aa12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 HHIPL1Q96JK4 782 aa12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 ZKSCAN3Q9BRR0 538 aa12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 ZBTB21Q9ULJ3 1066 aa12.71□□□□□ -0.37
CCDC90B-218ENST00000533761 GOLGA6L22H0YM25 854 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 AKR1B1P15121 316 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 CCT2P78371 535 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 COL9A3Q14050 684 aaPredicted RBP12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 RAB3GAP1Q15042 981 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 SEC23AQ15436 765 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 RTN1Q16799 776 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 FAM47AQ5JRC9 791 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 LARP1BQ659C4 914 aaKnown RBP12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 ERO1BQ86YB8 467 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 RGS22Q8NE09 1264 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 CLMNQ96JQ2 1002 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 MAP3K14Q99558 947 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 KANSL2Q9H9L4 492 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 BRPF3Q9ULD4 1205 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 STX8Q9UNK0 236 aa12.7□□□□□ -0.38
CCDC90B-218ENST00000533761 PTPDC1A2A3K4 754 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 USP17L5A8MUK1 530 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 H3BQV1 296 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 STX6O43752 255 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 PTPRAP18433 802 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 PTMSP20962 102 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 GNAQP50148 359 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 AKAP17AQ02040 695 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 PPATQ06203 517 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 C6orf132Q5T0Z8 1188 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 RGMBQ6NW40 437 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 TREML4Q6UXN2 200 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 HS6ST3Q8IZP7 471 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 ELP3Q9H9T3 547 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 AS3MTQ9HBK9 375 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 RBM27Q9P2N5 1060 aaKnown RBP12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 TACC3Q9Y6A5 838 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 SNCAIPQ9Y6H5 919 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 ZHX2Q9Y6X8 837 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 SPDYE5A6NIY4 337 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 ZNF157P51786 506 aaPredicted RBP12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 SEPT2Q15019 361 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 FANCBQ8NB91 859 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 SMARCC2Q8TAQ2 1214 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
CCDC90B-218ENST00000533761 TTLL1O95922 423 aa12.68□□□□□ -0.38
CCDC90B-218ENST00000533761 TOP1P11387 765 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-218ENST00000533761 XBP1P17861 261 aa12.68□□□□□ -0.38
CCDC90B-218ENST00000533761 JAG1P78504 1218 aa12.68□□□□□ -0.38
CCDC90B-218ENST00000533761 TRIM29Q14134 588 aa12.68□□□□□ -0.38
CCDC90B-218ENST00000533761 DEFB115Q30KQ5 88 aa12.68□□□□□ -0.38
CCDC90B-218ENST00000533761 PNMA1Q8ND90 353 aa12.68□□□□□ -0.38
CCDC90B-218ENST00000533761 NSUN7Q8NE18 718 aaKnown RBP12.68□□□□□ -0.38
CCDC90B-218ENST00000533761 OPTNQ96CV9 577 aa12.68□□□□□ -0.38
CCDC90B-218ENST00000533761 LZTS2Q9BRK4 669 aa12.68□□□□□ -0.38
CCDC90B-218ENST00000533761 STK36Q9NRP7 1315 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 DOCK1Q14185 1865 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 ZBTB48P10074 688 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 HSPA6P17066 643 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 IFNAR1P17181 557 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 SYT1P21579 422 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 ICA1Q05084 483 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 SHROOM1Q2M3G4 852 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 PAXIP1Q6ZW49 1069 aaPredicted RBP12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 ZNF280CQ8ND82 737 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 CEP95Q96GE4 821 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 WDR18Q9BV38 432 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 SH2D4AQ9H788 454 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 NCOA5Q9HCD5 579 aaKnown RBP12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 ARHGEF10LQ9HCE6 1279 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 MTMR4Q9NYA4 1195 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 SYNPO2Q9UMS6 1093 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 OTOFQ9HC10 1997 aa12.67□□□□□ -0.38
CCDC90B-218ENST00000533761 ATAD5Q96QE3 1844 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 IGKV6D-41A0A0C4DH26 115 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 VPS37CA5D8V6 355 aaPredicted RBP12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 DDX11L8A8MPP1 907 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 BRD1O95696 1058 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 GUCY1A2P33402 732 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 ECE1P42892 770 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 SSRP1Q08945 709 aaKnown RBP12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 ST3GAL1Q11201 340 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 TROAPQ12815 778 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 SPP2Q13103 211 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 PPIL2Q13356 520 aa12.66□□□□□ -0.38
CCDC90B-218ENST00000533761 LCE2AQ5TA79 106 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms