RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CAPN2P17655 700 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 RFX7Q2KHR2 1363 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 DGKHQ86XP1 1220 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 PHKBQ93100 1093 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 VPS54Q9P1Q0 977 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 SSX2IPQ9Y2D8 614 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 ARHGAP23Q9P227 1491 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 ADCY9O60503 1353 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 ATF7P17544 494 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 TGFB2P61812 414 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 DYNLL1P63167 89 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 ISM2Q6H9L7 571 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 USP17L2Q6R6M4 530 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 CCDC91Q7Z6B0 441 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 ZNF34Q8IZ26 560 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 GTF3C2Q8WUA4 911 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 PALD1Q9ULE6 856 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 PCDHA12Q9UN75 941 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 MROH7-TTC4A0A0A0MT08 1334 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 GDF11O95390 407 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 ZNF354CQ86Y25 554 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 MAP4K1Q92918 833 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 FAM193BQ96PV7 902 aaPredicted RBP12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 SRRTQ9BXP5 876 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 CPA1P15085 419 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 YARSP54577 528 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 GPSM2P81274 684 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 MTA3Q9BTC8 594 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 ZSWIM4Q9H7M6 989 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 MAGEF1Q9HAY2 307 aa12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 BCCIPQ9P287 314 aaKnown RBP eCLIP12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 LARSQ9P2J5 1176 aaKnown RBP12.53□□□□□ -0.4
AMBRA1-211ENST00000533727 ARHGEF37A1IGU5 675 aa12.52□□□□□ -0.4
AMBRA1-211ENST00000533727 MCM6Q14566 821 aa12.52□□□□□ -0.4
AMBRA1-211ENST00000533727 DIXDC1Q155Q3 683 aa12.52□□□□□ -0.4
AMBRA1-211ENST00000533727 PRR16Q569H4 304 aa12.52□□□□□ -0.4
AMBRA1-211ENST00000533727 SELENOOQ9BVL4 669 aa12.52□□□□□ -0.4
AMBRA1-211ENST00000533727 HAUS2Q9NVX0 235 aa12.52□□□□□ -0.4
AMBRA1-211ENST00000533727 OR52Z1P0C646 297 aa12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 TPH2Q8IWU9 490 aa12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 WRNIP1Q96S55 665 aa12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 TMX1Q9H3N1 280 aa12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 ZSWIM6Q9HCJ5 1215 aa12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 ZBTB24O43167 697 aaPredicted RBP12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 MYZAPP0CAP1 466 aa12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 TRIM14Q14142 442 aa12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 ELMSAN1Q6PJG2 1045 aa12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 MICALL1Q8N3F8 863 aa12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
AMBRA1-211ENST00000533727 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 MIS18BP1Q6P0N0 1132 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 IQCDQ96DY2 449 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 PLIN2Q99541 437 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 GNA14O95837 355 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 HOXA7P31268 230 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 CDK8P49336 464 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 XKR9Q5GH70 373 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 DCAF17Q5H9S7 520 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 NOSTRINQ8IVI9 506 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 C10orf67Q8IYJ2 551 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 METTL13Q8N6R0 699 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 MLKLQ8NB16 471 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 DDX25Q9UHL0 483 aaKnown RBP12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 DNAI1Q9UI46 699 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 FEM1BQ9UK73 627 aa12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 CCDC97Q96F63 343 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 HLTFQ14527 1009 aaKnown RBP eCLIP12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 FNBP4Q8N3X1 1017 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 GIMAP8Q8ND71 665 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 RBM46Q8TBY0 533 aaKnown RBP12.51□□□□□ -0.41
AMBRA1-211ENST00000533727 ANO6Q4KMQ2 910 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 SEC62Q99442 399 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 NBPF26B4DH59 902 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 EBAG9O00559 213 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 EXOC3O60645 756 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 MYL5Q02045 173 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 NBPF10Q6P3W6 841 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 NBPF15Q8N660 670 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 TSNARE1Q96NA8 513 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 LRRC7Q96NW7 1537 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 TMEM131LA2VDJ0 1609 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 A0A0G2JLW4 131 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 USP17L10C9JJH3 530 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 TACC1O75410 805 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 TERF1P54274 439 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 DPH6Q7L8W6 267 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 CCDC42Q96M95 316 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 MRPL44Q9H9J2 332 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 COMMD10Q9Y6G5 202 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 CHRNA5P30532 468 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 CKAP4Q07065 602 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 PRPF4BQ13523 1007 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
AMBRA1-211ENST00000533727 LIN9Q5TKA1 542 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms