RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 FRMPD2Q68DX3 1309 aaPredicted RBP16.4■□□□□ 0.22
CMTM1-217ENST00000533666 PALM3A6NDB9 673 aaPredicted RBP16.39■□□□□ 0.21
CMTM1-217ENST00000533666 GOLGA8AA7E2F4 631 aa16.39■□□□□ 0.21
CMTM1-217ENST00000533666 KLRF2D3W0D1 207 aa16.39■□□□□ 0.21
CMTM1-217ENST00000533666 DHX16O60231 1041 aaKnown RBP16.39■□□□□ 0.21
CMTM1-217ENST00000533666 MCM2P49736 904 aa16.39■□□□□ 0.21
CMTM1-217ENST00000533666 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
CMTM1-217ENST00000533666 TOB2Q14106 344 aaPredicted RBP16.39■□□□□ 0.21
CMTM1-217ENST00000533666 SYDE2Q5VT97 1194 aa16.39■□□□□ 0.21
CMTM1-217ENST00000533666 CPLX2Q6PUV4 134 aaKnown RBP16.39■□□□□ 0.21
CMTM1-217ENST00000533666 KIF2CQ99661 725 aa16.39■□□□□ 0.21
CMTM1-217ENST00000533666 BRPF3Q9ULD4 1205 aa16.39■□□□□ 0.21
CMTM1-217ENST00000533666 RABGAP1Q9Y3P9 1069 aa16.39■□□□□ 0.21
CMTM1-217ENST00000533666 PCNTO95613 3336 aa16.39■□□□□ 0.21
CMTM1-217ENST00000533666 SPDYE16A6NNV3 312 aaPredicted RBP16.38■□□□□ 0.21
CMTM1-217ENST00000533666 GOLGA8HP0CJ92 632 aa16.38■□□□□ 0.21
CMTM1-217ENST00000533666 SMARCA1P28370 1054 aa16.38■□□□□ 0.21
CMTM1-217ENST00000533666 AK2P54819 239 aa16.38■□□□□ 0.21
CMTM1-217ENST00000533666 CCNA1P78396 465 aa16.38■□□□□ 0.21
CMTM1-217ENST00000533666 TRAF1Q13077 416 aa16.38■□□□□ 0.21
CMTM1-217ENST00000533666 CCAR1Q8IX12 1150 aaKnown RBP16.38■□□□□ 0.21
CMTM1-217ENST00000533666 GPRC5AQ8NFJ5 357 aa16.38■□□□□ 0.21
CMTM1-217ENST00000533666 MYL10Q9BUA6 226 aa16.38■□□□□ 0.21
CMTM1-217ENST00000533666 FBXO28Q9NVF7 368 aa16.38■□□□□ 0.21
CMTM1-217ENST00000533666 MAD2L2Q9UI95 211 aa16.38■□□□□ 0.21
CMTM1-217ENST00000533666 VWA5AO00534 786 aa16.37■□□□□ 0.21
CMTM1-217ENST00000533666 COPB2P35606 906 aa16.37■□□□□ 0.21
CMTM1-217ENST00000533666 ARHGEF6Q15052 776 aa16.37■□□□□ 0.21
CMTM1-217ENST00000533666 FAM110CQ1W6H9 321 aa16.37■□□□□ 0.21
CMTM1-217ENST00000533666 NOM1Q5C9Z4 860 aaKnown RBP16.37■□□□□ 0.21
CMTM1-217ENST00000533666 ZSCAN31Q96LW9 406 aaPredicted RBP16.37■□□□□ 0.21
CMTM1-217ENST00000533666 SLKQ9H2G2 1235 aaPredicted RBP16.37■□□□□ 0.21
CMTM1-217ENST00000533666 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
CMTM1-217ENST00000533666 LIMCH1Q9UPQ0 1083 aa16.37■□□□□ 0.21
CMTM1-217ENST00000533666 CPLX1O14810 134 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 TBC1D8O95759 1140 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 PDIA3P30101 505 aaKnown RBP16.36■□□□□ 0.21
CMTM1-217ENST00000533666 SLC16A2P36021 539 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 OAZ1P54368 228 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 KIF22Q14807 665 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 TTBK2Q6IQ55 1244 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 CCDC144CPQ8IYA2 1237 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 ANKRD13CQ8N6S4 541 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 PAGR1Q9BTK6 254 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 SLC38A10Q9HBR0 1119 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 ADAMTS5Q9UNA0 930 aa16.36■□□□□ 0.21
CMTM1-217ENST00000533666 CDKL5O76039 1030 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 RXRAP19793 462 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 PLS1Q14651 629 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 C17orf99Q6UX52 265 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 TMTC3Q6ZXV5 915 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 ADGRF4Q8IZF3 695 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 STAG2Q8N3U4 1231 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 RRP36Q96EU6 259 aaKnown RBP16.35■□□□□ 0.21
CMTM1-217ENST00000533666 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 TEX13BQ9BXU2 312 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 UBA5Q9GZZ9 404 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 CWC22Q9HCG8 908 aaKnown RBP16.35■□□□□ 0.21
CMTM1-217ENST00000533666 SH2B1Q9NRF2 756 aaPredicted RBP16.35■□□□□ 0.21
CMTM1-217ENST00000533666 RBM27Q9P2N5 1060 aaKnown RBP16.35■□□□□ 0.21
CMTM1-217ENST00000533666 MORF4L1Q9UBU8 362 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 SEC63Q9UGP8 760 aaKnown RBP16.35■□□□□ 0.21
CMTM1-217ENST00000533666 CPA4Q9UI42 421 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 NID2Q14112 1375 aa16.35■□□□□ 0.21
CMTM1-217ENST00000533666 PARP14Q460N5 1801 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 ATP2A1O14983 1001 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 SLC25A27O95847 323 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 BCRP11274 1271 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 ERVK-9P63128 1117 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 ERVK-24P63145 666 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 AKAP17AQ02040 695 aaKnown RBP16.34■□□□□ 0.21
CMTM1-217ENST00000533666 SP3Q02447 781 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 RASGRP2Q7LDG7 609 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 RAB11FIP4Q86YS3 637 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 RANBP17Q9H2T7 1088 aaKnown RBP16.34■□□□□ 0.21
CMTM1-217ENST00000533666 VAT1LQ9HCJ6 419 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 RBPJLQ9UBG7 517 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 TPCN1Q9ULQ1 816 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 RLFQ13129 1914 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 ADGRA2Q96PE1 1338 aa16.34■□□□□ 0.21
CMTM1-217ENST00000533666 BAZ2BQ9UIF8 2168 aaKnown RBP16.34■□□□□ 0.21
CMTM1-217ENST00000533666 GPR25O00155 361 aa16.33■□□□□ 0.2
CMTM1-217ENST00000533666 PFKFB2O60825 505 aa16.33■□□□□ 0.2
CMTM1-217ENST00000533666 STAT3P40763 770 aa16.33■□□□□ 0.2
CMTM1-217ENST00000533666 CTCFP49711 727 aaPredicted RBP16.33■□□□□ 0.2
CMTM1-217ENST00000533666 STK3Q13188 491 aa16.33■□□□□ 0.2
CMTM1-217ENST00000533666 TKFCQ3LXA3 575 aa16.33■□□□□ 0.2
CMTM1-217ENST00000533666 NOL8Q76FK4 1167 aaKnown RBP16.33■□□□□ 0.2
CMTM1-217ENST00000533666 TRIM22Q8IYM9 498 aa16.33■□□□□ 0.2
CMTM1-217ENST00000533666 SPATC1LQ9H0A9 340 aa16.33■□□□□ 0.2
CMTM1-217ENST00000533666 RIOX1Q9H6W3 641 aa16.33■□□□□ 0.2
CMTM1-217ENST00000533666 HPS5Q9UPZ3 1129 aa16.33■□□□□ 0.2
CMTM1-217ENST00000533666 ZBTB5O15062 677 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 FKTNO75072 461 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 ICAM1P05362 532 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 HSPA1AP0DMV8 641 aaKnown RBP16.32■□□□□ 0.2
CMTM1-217ENST00000533666 HSPA1BP0DMV9 641 aaKnown RBP16.32■□□□□ 0.2
CMTM1-217ENST00000533666 MYH6P13533 1939 aa16.32■□□□□ 0.2
CMTM1-217ENST00000533666 MAPK4P31152 587 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms