RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.51
CAPRIN1-215ENST00000533657 KIF3AQ9Y496 699 aa11.9□□□□□ -0.51
CAPRIN1-215ENST00000533657 ZNF500O60304 480 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 BMP3P12645 472 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 FEM1BQ9UK73 627 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 ZHX2Q9Y6X8 837 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 MYH15Q9Y2K3 1946 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 TESPA1A2RU30 521 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 CBX1P83916 185 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 NECAB1Q8N987 351 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 MYL10Q9BUA6 226 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 MAF1Q9H063 256 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 ZCCHC17Q9NP64 241 aaKnown RBP11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 CHMP5Q9NZZ3 219 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 PNMA2Q9UL42 364 aa11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 CIZ1Q9ULV3 898 aaPredicted RBP11.89□□□□□ -0.51
CAPRIN1-215ENST00000533657 UBE2Q2LH0YL09 131 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 MOGSQ13724 837 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 NUP133Q8WUM0 1156 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 WASF1Q92558 559 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 CLMNQ96JQ2 1002 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 ELP3Q9H9T3 547 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 FZD1Q9UP38 647 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 PTPDC1A2A3K4 754 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 CPLX1O14810 134 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 IRF6O14896 467 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 DEXIO95424 95 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 HOXA7P31268 230 aaPredicted RBP11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 SLC1A4P43007 532 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 SLC20A2Q08357 652 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 SPP2Q13103 211 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 MTMR2Q13614 643 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 KIAA1755Q5JYT7 1200 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 LBX2Q6XYB7 198 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 NOL8Q76FK4 1167 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 SAPCD2Q86UD0 394 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 SRBD1Q8N5C6 995 aaKnown RBP11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 OPTNQ96CV9 577 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 SLC10A4Q96EP9 437 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 FEZ1Q99689 392 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 UTRNP46939 3433 aa11.88□□□□□ -0.51
CAPRIN1-215ENST00000533657 COL11A1P12107 1806 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 KLRF2D3W0D1 207 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 ADD1P35611 737 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 CCT2P78371 535 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 STK3Q13188 491 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 MOB2Q70IA6 237 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 FASTKD5Q7L8L6 764 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 CHURC1Q8WUH1 139 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 LARP6Q9BRS8 491 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 NCOA5Q9HCD5 579 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 SH3GLB2Q9NR46 395 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 TMOD4Q9NZQ9 345 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 TMEM88BA6NKF7 163 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 PLEKHA8P1O95397 391 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 VCAM1P19320 739 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 ATP2B2Q01814 1243 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 SSRP1Q08945 709 aaKnown RBP11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 TRAF1Q13077 416 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 SNAPC2Q13487 334 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 SLC35G1Q2M3R5 365 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 SPRYD7Q5W111 196 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 RASAL3Q86YV0 1011 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 STAG2Q8N3U4 1231 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 ADAMTS5Q9UNA0 930 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
CAPRIN1-215ENST00000533657 SLC10A3P09131 477 aa11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 PDCP20941 246 aa11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 GJA5P36382 358 aa11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 GTF2A2P52657 109 aa11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 PRKG1Q13976 671 aa11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 RANBP17Q9H2T7 1088 aaKnown RBP11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 RXRAP19793 462 aa11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 STAT2P52630 851 aa11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 PFKFB3Q16875 520 aaPredicted RBP11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 SYDE2Q5VT97 1194 aa11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 GTF3C2Q8WUA4 911 aaPredicted RBP11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 AGTPBP1Q9UPW5 1226 aa11.86□□□□□ -0.51
CAPRIN1-215ENST00000533657 USP17L15C9J2P7 530 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 USP17L13C9JLJ4 530 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 USP17L11C9JVI0 530 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 USP17L18D6R9N7 530 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 USP17L22D6RA61 530 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 USP17L17D6RBQ6 530 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 USP17L19D6RCP7 530 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 USP17L20D6RJB6 530 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 CYTH3O43739 400 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 CETPP11597 493 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 USP17L24Q0WX57 530 aa11.85□□□□□ -0.51
CAPRIN1-215ENST00000533657 PABPC4Q13310 644 aaKnown RBP eCLIP11.85□□□□□ -0.512e-26■□□□□ 10.8
CAPRIN1-215ENST00000533657 CCDC96Q2M329 555 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms