RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CHP1Q99653 195 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 VIPAS39Q9H9C1 493 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 KAT6BQ8WYB5 2073 aa18.71■□□□□ 0.59
CTSB-228ENST00000533455 KIAA1551Q9HCM1 1747 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 PDS5AQ29RF7 1337 aaKnown RBP18.7■□□□□ 0.58
CTSB-228ENST00000533455 CASZ1Q86V15 1759 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 EEF1GP26641 437 aaKnown RBP18.7■□□□□ 0.58
CTSB-228ENST00000533455 NLRP5P59047 1200 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 DYNLL1P63167 89 aaKnown RBP18.7■□□□□ 0.58
CTSB-228ENST00000533455 SEMA3FQ13275 785 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 WWC2Q6AWC2 1192 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 CTR9Q6PD62 1173 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 CCDC148Q8NFR7 591 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 MED4Q9NPJ6 270 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 FAN1Q9Y2M0 1017 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 GDAQ9Y2T3 454 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 MYH1P12882 1939 aa18.7■□□□□ 0.58
CTSB-228ENST00000533455 TTC26A0AVF1 554 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 N4BP1O75113 896 aaKnown RBP18.69■□□□□ 0.58
CTSB-228ENST00000533455 MCM7P33993 719 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 KCNB1Q14721 858 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 NCAPH2Q6IBW4 605 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 ZNF507Q8TCN5 953 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 THAP9Q9H5L6 903 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 CAPN11Q9UMQ6 739 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 MAST2Q6P0Q8 1798 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 IVLP07476 585 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 USP14P54578 494 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 TMED8Q6PL24 325 aaPredicted RBP18.69■□□□□ 0.58
CTSB-228ENST00000533455 LEKR1Q6ZMV7 388 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 SLAIN2Q9P270 581 aa18.69■□□□□ 0.58
CTSB-228ENST00000533455 MCM3P25205 808 aa18.68■□□□□ 0.58
CTSB-228ENST00000533455 CALML3P27482 149 aa18.68■□□□□ 0.58
CTSB-228ENST00000533455 STAT6P42226 847 aa18.68■□□□□ 0.58
CTSB-228ENST00000533455 AARSP49588 968 aaKnown RBP eCLIP18.68■□□□□ 0.58
CTSB-228ENST00000533455 HERVK_113P62684 666 aa18.68■□□□□ 0.58
CTSB-228ENST00000533455 PAPD7Q5XG87 772 aaKnown RBP18.68■□□□□ 0.58
CTSB-228ENST00000533455 INTS5Q6P9B9 1019 aaKnown RBP18.68■□□□□ 0.58
CTSB-228ENST00000533455 TRERF1Q96PN7 1200 aa18.68■□□□□ 0.58
CTSB-228ENST00000533455 CCDC87Q9NVE4 849 aa18.68■□□□□ 0.58
CTSB-228ENST00000533455 LUC7L2Q9Y383 392 aaKnown RBP18.68■□□□□ 0.58
CTSB-228ENST00000533455 A0A0U1RQG5 324 aaPredicted RBP18.67■□□□□ 0.58
CTSB-228ENST00000533455 LRRIQ3A6PVS8 624 aaPredicted RBP18.67■□□□□ 0.58
CTSB-228ENST00000533455 CAMTA2O94983 1202 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 MYL1P05976 194 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 GTF2E1P29083 439 aaPredicted RBP18.67■□□□□ 0.58
CTSB-228ENST00000533455 UBE4AQ14139 1066 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 MEA1Q16626 185 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 HSP90B2PQ58FF3 399 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 ZNF384Q8TF68 577 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 RPGRIP1Q96KN7 1286 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 DISC1Q9NRI5 854 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 TRIM10Q9UDY6 481 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 GUCA1BQ9UMX6 200 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 BAZ2BQ9UIF8 2168 aaKnown RBP18.67■□□□□ 0.58
CTSB-228ENST00000533455 TARSL2A2RTX5 802 aaKnown RBP18.67■□□□□ 0.58
CTSB-228ENST00000533455 GYG1P46976 350 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 WDR59Q6PJI9 974 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 EHBP1Q8NDI1 1231 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 NOC3LQ8WTT2 800 aaKnown RBP18.67■□□□□ 0.58
CTSB-228ENST00000533455 SH3GLB2Q9NR46 395 aa18.67■□□□□ 0.58
CTSB-228ENST00000533455 COL14A1Q05707 1796 aaKnown RBP18.67■□□□□ 0.58
CTSB-228ENST00000533455 TRIM49BA6NDI0 452 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 ADAMTS3O15072 1205 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 NAALADL2Q58DX5 795 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 SRLQ86TD4 932 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 BLIDQ8IZY5 108 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 USP17L12C9JPN9 530 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 USP17L21D6R901 530 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 KLRC4O43908 158 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 KRT83P78385 493 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 CKAP4Q07065 602 aaKnown RBP18.66■□□□□ 0.58
CTSB-228ENST00000533455 MAP9Q49MG5 647 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 CCDC102AQ96A19 550 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 SAR1BQ9Y6B6 198 aa18.66■□□□□ 0.58
CTSB-228ENST00000533455 RHOBTB3O94955 611 aa18.65■□□□□ 0.58
CTSB-228ENST00000533455 ATP1A1P05023 1023 aaKnown RBP18.65■□□□□ 0.58
CTSB-228ENST00000533455 SRGNP10124 158 aa18.65■□□□□ 0.58
CTSB-228ENST00000533455 DNM2P50570 870 aa18.65■□□□□ 0.58
CTSB-228ENST00000533455 STIM1Q13586 685 aa18.65■□□□□ 0.58
CTSB-228ENST00000533455 BBXQ8WY36 941 aaPredicted RBP18.65■□□□□ 0.58
CTSB-228ENST00000533455 TTYH3Q9C0H2 523 aa18.65■□□□□ 0.58
CTSB-228ENST00000533455 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
CTSB-228ENST00000533455 PCDHA4Q9UN74 947 aa18.65■□□□□ 0.58
CTSB-228ENST00000533455 MAPK8IP1Q9UQF2 711 aa18.65■□□□□ 0.58
CTSB-228ENST00000533455 FAM205AQ6ZU69 1335 aa18.65■□□□□ 0.58
CTSB-228ENST00000533455 MYO1CO00159 1063 aa18.64■□□□□ 0.58
CTSB-228ENST00000533455 KIF5BP33176 963 aa18.64■□□□□ 0.58
CTSB-228ENST00000533455 PMS1P54277 932 aaKnown RBP18.64■□□□□ 0.58
CTSB-228ENST00000533455 TSR1Q2NL82 804 aaKnown RBP18.64■□□□□ 0.58
CTSB-228ENST00000533455 GIMAP8Q8ND71 665 aaPredicted RBP18.64■□□□□ 0.58
CTSB-228ENST00000533455 MYH14Q7Z406 1995 aaKnown RBP18.64■□□□□ 0.57
CTSB-228ENST00000533455 ANO9A1A5B4 782 aa18.64■□□□□ 0.57
CTSB-228ENST00000533455 PSMA7O14818 248 aa18.64■□□□□ 0.57
CTSB-228ENST00000533455 NMT2O60551 498 aa18.64■□□□□ 0.57
CTSB-228ENST00000533455 VEGFAP15692 232 aaPredicted RBP18.64■□□□□ 0.57
CTSB-228ENST00000533455 SBK1Q52WX2 424 aa18.64■□□□□ 0.57
CTSB-228ENST00000533455 CCDC122Q5T0U0 273 aa18.64■□□□□ 0.57
CTSB-228ENST00000533455 TTI2Q6NXR4 508 aa18.64■□□□□ 0.57
CTSB-228ENST00000533455 RETREG2Q8NC44 543 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms