RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 ZNF174Q15697 407 aa24.97■■□□□ 1.59
AP004608.1-202ENST00000533390 TRIM44Q96DX7 344 aaPredicted RBP24.97■■□□□ 1.59
AP004608.1-202ENST00000533390 ZMYND12Q9H0C1 365 aa24.97■■□□□ 1.59
AP004608.1-202ENST00000533390 LTBP3Q9NS15 1303 aa24.97■■□□□ 1.59
AP004608.1-202ENST00000533390 STX1AQ16623 288 aa24.96■■□□□ 1.59
AP004608.1-202ENST00000533390 ARFGEF1Q9Y6D6 1849 aa24.96■■□□□ 1.59
AP004608.1-202ENST00000533390 PTGER2P43116 358 aa24.96■■□□□ 1.59
AP004608.1-202ENST00000533390 FERMT2Q96AC1 680 aa24.96■■□□□ 1.59
AP004608.1-202ENST00000533390 KCNH3Q9ULD8 1083 aa24.96■■□□□ 1.59
AP004608.1-202ENST00000533390 PCDHA6Q9UN73 950 aa24.96■■□□□ 1.59
AP004608.1-202ENST00000533390 PCDHA8Q9Y5H6 950 aa24.96■■□□□ 1.59
AP004608.1-202ENST00000533390 M0R2N6 131 aa24.95■■□□□ 1.58
AP004608.1-202ENST00000533390 RAD21O60216 631 aa24.95■■□□□ 1.58
AP004608.1-202ENST00000533390 DCAF4Q8WV16 495 aa24.95■■□□□ 1.58
AP004608.1-202ENST00000533390 CNTNAP1P78357 1384 aa24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 SMCO2A6NFE2 343 aa24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 ADAMTS3O15072 1205 aa24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 ZRSR1Q15695 479 aaKnown RBP24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 FAM83AQ86UY5 434 aa24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 RASGRP4Q8TDF6 673 aa24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 MYOZ2Q9NPC6 264 aa24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 RPS12P25398 132 aaKnown RBP24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 SHROOM1Q2M3G4 852 aaPredicted RBP24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 SPECC1Q5M775 1068 aa24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 ZBED3Q96IU2 234 aaPredicted RBP24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 ANO10Q9NW15 660 aa24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 KIAA1468Q9P260 1216 aa24.94■■□□□ 1.58
AP004608.1-202ENST00000533390 ATP2C1P98194 919 aaPredicted RBP24.93■■□□□ 1.58
AP004608.1-202ENST00000533390 GRIN1Q05586 938 aa24.93■■□□□ 1.58
AP004608.1-202ENST00000533390 SLFN13Q68D06 897 aa24.93■■□□□ 1.58
AP004608.1-202ENST00000533390 KCTD1Q719H9 257 aa24.93■■□□□ 1.58
AP004608.1-202ENST00000533390 ADGRF4Q8IZF3 695 aa24.93■■□□□ 1.58
AP004608.1-202ENST00000533390 PDLIM2Q96JY6 352 aa24.93■■□□□ 1.58
AP004608.1-202ENST00000533390 CSRNP2Q9H175 543 aa24.93■■□□□ 1.58
AP004608.1-202ENST00000533390 DNAJC25Q9H1X3 360 aa24.93■■□□□ 1.58
AP004608.1-202ENST00000533390 ESYT2A0FGR8 921 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 WNT10BO00744 389 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 WNT7AO00755 349 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 GH2P01242 217 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 SLC1A4P43007 532 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 PTGDRQ13258 359 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 KRT25Q7Z3Z0 450 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 JMJD4Q9H9V9 463 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 PNMA6FA0A0J9YX94 578 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 MCM7P33993 719 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 ZNF165P49910 485 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 TTBK2Q6IQ55 1244 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 CNNM3Q8NE01 707 aa24.92■■□□□ 1.58
AP004608.1-202ENST00000533390 TNNI2P48788 182 aa24.91■■□□□ 1.58
AP004608.1-202ENST00000533390 RASSF7Q02833 373 aa24.91■■□□□ 1.58
AP004608.1-202ENST00000533390 CBX8Q9HC52 389 aa24.91■■□□□ 1.58
AP004608.1-202ENST00000533390 USP25Q9UHP3 1055 aa24.91■■□□□ 1.58
AP004608.1-202ENST00000533390 HOOK1Q9UJC3 728 aaKnown RBP24.91■■□□□ 1.58
AP004608.1-202ENST00000533390 NBPF9Q3BBW0 867 aa24.9■■□□□ 1.58
AP004608.1-202ENST00000533390 PPP1R18Q6NYC8 613 aa24.9■■□□□ 1.58
AP004608.1-202ENST00000533390 KRBA2Q6ZNG9 492 aa24.9■■□□□ 1.58
AP004608.1-202ENST00000533390 GMCL1P1Q8NEA9 526 aa24.9■■□□□ 1.58
AP004608.1-202ENST00000533390 ERCC4Q92889 916 aaPredicted RBP24.9■■□□□ 1.58
AP004608.1-202ENST00000533390 SLC16A2P36021 539 aa24.89■■□□□ 1.58
AP004608.1-202ENST00000533390 SIAH1Q8IUQ4 282 aa24.89■■□□□ 1.58
AP004608.1-202ENST00000533390 TMEM39BQ9GZU3 492 aa24.89■■□□□ 1.58
AP004608.1-202ENST00000533390 ZBTB5O15062 677 aa24.89■■□□□ 1.57
AP004608.1-202ENST00000533390 TBC1D12O60347 775 aa24.89■■□□□ 1.57
AP004608.1-202ENST00000533390 NONOQ15233 471 aaKnown RBP eCLIP24.89■■□□□ 1.57
AP004608.1-202ENST00000533390 INF2Q27J81 1249 aa24.89■■□□□ 1.57
AP004608.1-202ENST00000533390 COA7Q96BR5 231 aa24.89■■□□□ 1.57
AP004608.1-202ENST00000533390 SYNPO2Q9UMS6 1093 aa24.89■■□□□ 1.57
AP004608.1-202ENST00000533390 F5H6K3 240 aa24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 ZNF280AP59817 542 aaPredicted RBP24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 KLRC3Q07444 240 aa24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 RRP1BQ14684 758 aaKnown RBP24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 LONRF3Q496Y0 759 aa24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 ARL6IP4Q66PJ3 421 aaKnown RBP24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 LUZP1Q86V48 1076 aa24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 ELOA2Q8IYF1 753 aaPredicted RBP24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 REXO1Q8N1G1 1221 aaKnown RBP24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 NLGN2Q8NFZ4 835 aa24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 ARHGEF10LQ9HCE6 1279 aa24.88■■□□□ 1.57
AP004608.1-202ENST00000533390 VWA3AA6NCI4 1184 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 POLR2DO15514 142 aaKnown RBP24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 ADCY7P51828 1080 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 PLCB2Q00722 1185 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 CEP57L1Q8IYX8 460 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 NAT10Q9H0A0 1025 aaKnown RBP24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 SHTN1A0MZ66 631 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 USP17L10C9JJH3 530 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 JAG1P78504 1218 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 TNFAIP1Q13829 316 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 DPF2Q92785 391 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 MTMR8Q96EF0 704 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 CCDC34Q96HJ3 373 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 GMCL1Q96IK5 515 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 GJA3Q9Y6H8 435 aa24.87■■□□□ 1.57
AP004608.1-202ENST00000533390 GOLGB1Q14789 3259 aaKnown RBP24.86■■□□□ 1.57
AP004608.1-202ENST00000533390 FZD9O00144 591 aa24.86■■□□□ 1.57
AP004608.1-202ENST00000533390 KANK3Q6NY19 840 aa24.86■■□□□ 1.57
AP004608.1-202ENST00000533390 C11orf57Q6ZUT1 292 aaPredicted RBP24.86■■□□□ 1.57
AP004608.1-202ENST00000533390 SYMPKQ92797 1274 aaKnown RBP24.85■■□□□ 1.57
AP004608.1-202ENST00000533390 BIN2Q9UBW5 565 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms