RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 AS3MTQ9HBK9 375 aa18.42■□□□□ 0.54
TRIM3-213ENST00000533309 ISY1Q9ULR0 285 aaKnown RBP18.42■□□□□ 0.54
TRIM3-213ENST00000533309 ZHX2Q9Y6X8 837 aa18.42■□□□□ 0.54
TRIM3-213ENST00000533309 RLFQ13129 1914 aa18.42■□□□□ 0.54
TRIM3-213ENST00000533309 SMCHD1A6NHR9 2005 aa18.42■□□□□ 0.54
TRIM3-213ENST00000533309 TRPM7Q96QT4 1865 aa18.42■□□□□ 0.54
TRIM3-213ENST00000533309 STXBP3O00186 592 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 LPAR1Q92633 364 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 CLMNQ96JQ2 1002 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 EMILIN3Q9NT22 766 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 BARHL2Q9NY43 387 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 ATP6V1DQ9Y5K8 247 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 LOC285556D6RIA3 1793 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 PPP1R11O60927 126 aaPredicted RBP18.41■□□□□ 0.54
TRIM3-213ENST00000533309 XBP1P17861 261 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 MCM4P33991 863 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 BACE1P56817 501 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 HEATR3Q7Z4Q2 680 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 ANKRD13AQ8IZ07 590 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 SH3GLB2Q9NR46 395 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 SEC63Q9UGP8 760 aaKnown RBP18.41■□□□□ 0.54
TRIM3-213ENST00000533309 AFG3L2Q9Y4W6 797 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 CSADQ9Y600 493 aa18.41■□□□□ 0.54
TRIM3-213ENST00000533309 TRIM75PA6NK02 468 aa18.4■□□□□ 0.54
TRIM3-213ENST00000533309 U2AF2P26368 475 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRIM3-213ENST00000533309 DNM1Q05193 864 aaKnown RBP18.4■□□□□ 0.54
TRIM3-213ENST00000533309 SYDE2Q5VT97 1194 aa18.4■□□□□ 0.54
TRIM3-213ENST00000533309 DIS3L2Q8IYB7 885 aaKnown RBP18.4■□□□□ 0.54
TRIM3-213ENST00000533309 OXER1Q8TDS5 423 aa18.4■□□□□ 0.54
TRIM3-213ENST00000533309 CNKSR2Q8WXI2 1034 aa18.4■□□□□ 0.54
TRIM3-213ENST00000533309 PNMA6FA0A0J9YX94 578 aa18.39■□□□□ 0.53
TRIM3-213ENST00000533309 ZBTB5O15062 677 aa18.39■□□□□ 0.53
TRIM3-213ENST00000533309 WDR46O15213 610 aaKnown RBP18.39■□□□□ 0.53
TRIM3-213ENST00000533309 PLA2G6O60733 806 aa18.39■□□□□ 0.53
TRIM3-213ENST00000533309 VCAM1P19320 739 aa18.39■□□□□ 0.53
TRIM3-213ENST00000533309 STAT2P52630 851 aa18.39■□□□□ 0.53
TRIM3-213ENST00000533309 USP14P54578 494 aa18.39■□□□□ 0.53
TRIM3-213ENST00000533309 TTLL12Q14166 644 aaPredicted RBP18.39■□□□□ 0.53
TRIM3-213ENST00000533309 LDLRAD1Q5T700 205 aa18.39■□□□□ 0.53
TRIM3-213ENST00000533309 C12orf42Q96LP6 360 aa18.39■□□□□ 0.53
TRIM3-213ENST00000533309 PRR12Q9ULL5 1215 aa18.39■□□□□ 0.53
TRIM3-213ENST00000533309 BTBD18B2RXH4 712 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 hCG_1984214I3L0E3 225 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 ADAMTS3O15072 1205 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 CDC37Q16543 378 aaPredicted RBP18.38■□□□□ 0.53
TRIM3-213ENST00000533309 QRICH1Q2TAL8 776 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 ARMC9Q7Z3E5 817 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 BRAPQ7Z569 592 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 FAM177A1Q8N128 213 aaPredicted RBP18.38■□□□□ 0.53
TRIM3-213ENST00000533309 ZNF713Q8N859 430 aaPredicted RBP18.38■□□□□ 0.53
TRIM3-213ENST00000533309 FOXP1Q9H334 677 aaPredicted RBP18.38■□□□□ 0.53
TRIM3-213ENST00000533309 ELP3Q9H9T3 547 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 FBXO28Q9NVF7 368 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 CNPY2Q9Y2B0 182 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 HMGCS2P54868 508 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
TRIM3-213ENST00000533309 NR5A1Q13285 461 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 SAFBQ15424 915 aaKnown RBP eCLIP18.38■□□□□ 0.53
TRIM3-213ENST00000533309 ZNF408Q9H9D4 720 aa18.38■□□□□ 0.53
TRIM3-213ENST00000533309 COL11A1P12107 1806 aaPredicted RBP18.37■□□□□ 0.53
TRIM3-213ENST00000533309 SPDYE5A6NIY4 337 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 C19orf81C9J6K1 198 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 NLRP5P59047 1200 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 FAM160B2Q86V87 743 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 ERO1BQ86YB8 467 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 NOSTRINQ8IVI9 506 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 CCDC148Q8NFR7 591 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 CHURC1Q8WUH1 139 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 TNFRSF25Q93038 417 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 COA7Q96BR5 231 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 FEM1BQ9UK73 627 aa18.37■□□□□ 0.53
TRIM3-213ENST00000533309 ITGBL1O95965 494 aaPredicted RBP18.36■□□□□ 0.53
TRIM3-213ENST00000533309 KRT2P35908 639 aa18.36■□□□□ 0.53
TRIM3-213ENST00000533309 NAPAP54920 295 aa18.36■□□□□ 0.53
TRIM3-213ENST00000533309 SNAP25P60880 206 aa18.36■□□□□ 0.53
TRIM3-213ENST00000533309 PPATQ06203 517 aa18.36■□□□□ 0.53
TRIM3-213ENST00000533309 SH3D19Q5HYK7 790 aa18.36■□□□□ 0.53
TRIM3-213ENST00000533309 MYSM1Q5VVJ2 828 aa18.36■□□□□ 0.53
TRIM3-213ENST00000533309 CHADLQ6NUI6 762 aa18.36■□□□□ 0.53
TRIM3-213ENST00000533309 DAGLBQ8NCG7 672 aa18.36■□□□□ 0.53
TRIM3-213ENST00000533309 ZMYND12Q9H0C1 365 aa18.36■□□□□ 0.53
TRIM3-213ENST00000533309 RPAP3Q9H6T3 665 aaPredicted RBP18.36■□□□□ 0.53
TRIM3-213ENST00000533309 GDPD2Q9HCC8 539 aa18.36■□□□□ 0.53
TRIM3-213ENST00000533309 ESYT2A0FGR8 921 aa18.35■□□□□ 0.53
TRIM3-213ENST00000533309 M0R2N6 131 aa18.35■□□□□ 0.53
TRIM3-213ENST00000533309 CALML3P27482 149 aa18.35■□□□□ 0.53
TRIM3-213ENST00000533309 RBM46Q8TBY0 533 aaKnown RBP18.35■□□□□ 0.53
TRIM3-213ENST00000533309 RANBP17Q9H2T7 1088 aaKnown RBP18.35■□□□□ 0.53
TRIM3-213ENST00000533309 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.35■□□□□ 0.53
TRIM3-213ENST00000533309 PCDHA4Q9UN74 947 aa18.35■□□□□ 0.53
TRIM3-213ENST00000533309 IRF6O14896 467 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 FKBP1BP68106 108 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 KRT85P78386 507 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 GNL2Q13823 731 aaKnown RBP18.34■□□□□ 0.53
TRIM3-213ENST00000533309 EARS2Q5JPH6 523 aaKnown RBP18.34■□□□□ 0.53
TRIM3-213ENST00000533309 PPP1R18Q6NYC8 613 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 CCDC12Q8WUD4 166 aaPredicted RBP18.34■□□□□ 0.53
TRIM3-213ENST00000533309 KIFC2Q96AC6 838 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 OTUD5Q96G74 571 aa18.34■□□□□ 0.53
TRIM3-213ENST00000533309 FTOQ9C0B1 505 aaKnown RBP eCLIP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms