RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 FTOQ9C0B1 505 aaKnown RBP eCLIP23.4■■□□□ 1.34
GSDMD-212ENST00000533063 PICK1Q9NRD5 415 aa23.4■■□□□ 1.34
GSDMD-212ENST00000533063 TFIP11Q9UBB9 837 aaKnown RBP23.4■■□□□ 1.34
GSDMD-212ENST00000533063 SNCAIPQ9Y6H5 919 aa23.4■■□□□ 1.34
GSDMD-212ENST00000533063 SMCHD1A6NHR9 2005 aa23.4■■□□□ 1.34
GSDMD-212ENST00000533063 MAP1SQ66K74 1059 aaPredicted RBP23.4■■□□□ 1.34
GSDMD-212ENST00000533063 TMEM87AQ8NBN3 555 aa23.4■■□□□ 1.34
GSDMD-212ENST00000533063 FOXP1Q9H334 677 aaPredicted RBP23.4■■□□□ 1.34
GSDMD-212ENST00000533063 ISY1Q9ULR0 285 aaKnown RBP23.4■■□□□ 1.34
GSDMD-212ENST00000533063 PARP14Q460N5 1801 aa23.39■■□□□ 1.34
GSDMD-212ENST00000533063 PRPF40AO75400 957 aaKnown RBP23.39■■□□□ 1.33
GSDMD-212ENST00000533063 MAP3K9P80192 1104 aa23.39■■□□□ 1.33
GSDMD-212ENST00000533063 SPP2Q13103 211 aa23.39■■□□□ 1.33
GSDMD-212ENST00000533063 MTMR2Q13614 643 aa23.39■■□□□ 1.33
GSDMD-212ENST00000533063 MYSM1Q5VVJ2 828 aa23.39■■□□□ 1.33
GSDMD-212ENST00000533063 TNFRSF25Q93038 417 aa23.39■■□□□ 1.33
GSDMD-212ENST00000533063 FEZ1Q99689 392 aa23.39■■□□□ 1.33
GSDMD-212ENST00000533063 EMILIN3Q9NT22 766 aa23.39■■□□□ 1.33
GSDMD-212ENST00000533063 SEC63Q9UGP8 760 aaKnown RBP23.39■■□□□ 1.33
GSDMD-212ENST00000533063 PNMA6FA0A0J9YX94 578 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 FIBPO43427 364 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 PPP1R12BO60237 982 aaPredicted RBP23.38■■□□□ 1.33
GSDMD-212ENST00000533063 NCLP19338 710 aaKnown RBP23.38■■□□□ 1.33
GSDMD-212ENST00000533063 KRT85P78386 507 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 MOB2Q70IA6 237 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 NOSTRINQ8IVI9 506 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 ZNF280CQ8ND82 737 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 NMRK2Q9NPI5 230 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 ZHX2Q9Y6X8 837 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 ZBTB5O15062 677 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 FMR1Q06787 632 aaKnown RBP eCLIP23.38■■□□□ 1.33
GSDMD-212ENST00000533063 SAFBQ15424 915 aaKnown RBP eCLIP23.38■■□□□ 1.33
GSDMD-212ENST00000533063 EARS2Q5JPH6 523 aaKnown RBP23.38■■□□□ 1.33
GSDMD-212ENST00000533063 USP28Q96RU2 1077 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 CLEC11AQ9Y240 323 aa23.38■■□□□ 1.33
GSDMD-212ENST00000533063 GOLGA6L22H0YM25 854 aa23.37■■□□□ 1.33
GSDMD-212ENST00000533063 TRAF5O00463 557 aa23.37■■□□□ 1.33
GSDMD-212ENST00000533063 KRT2P35908 639 aa23.37■■□□□ 1.33
GSDMD-212ENST00000533063 STAT2P52630 851 aa23.37■■□□□ 1.33
GSDMD-212ENST00000533063 BACE1P56817 501 aa23.37■■□□□ 1.33
GSDMD-212ENST00000533063 NLRP5P59047 1200 aa23.37■■□□□ 1.33
GSDMD-212ENST00000533063 NOM1Q5C9Z4 860 aaKnown RBP23.37■■□□□ 1.33
GSDMD-212ENST00000533063 SYDE2Q5VT97 1194 aa23.37■■□□□ 1.33
GSDMD-212ENST00000533063 M0R2N6 131 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 MAP3K11Q16584 847 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 QRICH1Q2TAL8 776 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 LPAR1Q92633 364 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 COA7Q96BR5 231 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 ZMYND12Q9H0C1 365 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 PRR12Q9ULL5 1215 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 AFG3L2Q9Y4W6 797 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 RLFQ13129 1914 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 FAM205CA6NFA0 338 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 SNAP25P60880 206 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 CDC37Q16543 378 aaPredicted RBP23.36■■□□□ 1.33
GSDMD-212ENST00000533063 AS3MTQ9HBK9 375 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 FBXO28Q9NVF7 368 aa23.36■■□□□ 1.33
GSDMD-212ENST00000533063 TRIM75PA6NK02 468 aa23.35■■□□□ 1.33
GSDMD-212ENST00000533063 hCG_1984214I3L0E3 225 aa23.35■■□□□ 1.33
GSDMD-212ENST00000533063 PLA2G6O60733 806 aa23.35■■□□□ 1.33
GSDMD-212ENST00000533063 GADD45BO75293 160 aaPredicted RBP23.35■■□□□ 1.33
GSDMD-212ENST00000533063 IREB2P48200 963 aaKnown RBP23.35■■□□□ 1.33
GSDMD-212ENST00000533063 TOB1P50616 345 aaPredicted RBP23.35■■□□□ 1.33
GSDMD-212ENST00000533063 NAPAP54920 295 aa23.35■■□□□ 1.33
GSDMD-212ENST00000533063 GNL2Q13823 731 aaKnown RBP23.35■■□□□ 1.33
GSDMD-212ENST00000533063 FAM177A1Q8N128 213 aaPredicted RBP23.35■■□□□ 1.33
GSDMD-212ENST00000533063 ZNF713Q8N859 430 aaPredicted RBP23.35■■□□□ 1.33
GSDMD-212ENST00000533063 LEO1Q8WVC0 666 aaPredicted RBP23.35■■□□□ 1.33
GSDMD-212ENST00000533063 CNKSR2Q8WXI2 1034 aa23.35■■□□□ 1.33
GSDMD-212ENST00000533063 CLMNQ96JQ2 1002 aa23.35■■□□□ 1.33
GSDMD-212ENST00000533063 PCDHA4Q9UN74 947 aa23.35■■□□□ 1.33
GSDMD-212ENST00000533063 VCAM1P19320 739 aa23.34■■□□□ 1.33
GSDMD-212ENST00000533063 NF2P35240 595 aa23.34■■□□□ 1.33
GSDMD-212ENST00000533063 ATL3Q6DD88 541 aa23.34■■□□□ 1.33
GSDMD-212ENST00000533063 DAGLBQ8NCG7 672 aa23.34■■□□□ 1.33
GSDMD-212ENST00000533063 CCDC148Q8NFR7 591 aa23.34■■□□□ 1.33
GSDMD-212ENST00000533063 DCAF8L1A6NGE4 600 aa23.33■■□□□ 1.33
GSDMD-212ENST00000533063 WDR46O15213 610 aaKnown RBP23.33■■□□□ 1.33
GSDMD-212ENST00000533063 CALML3P27482 149 aa23.33■■□□□ 1.33
GSDMD-212ENST00000533063 CEBPZQ03701 1054 aaKnown RBP23.33■■□□□ 1.33
GSDMD-212ENST00000533063 IKQ13123 557 aaPredicted RBP23.33■■□□□ 1.33
GSDMD-212ENST00000533063 BLIDQ8IZY5 108 aa23.33■■□□□ 1.33
GSDMD-212ENST00000533063 CLIC4Q9Y696 253 aa23.33■■□□□ 1.33
GSDMD-212ENST00000533063 ELP1O95163 1332 aa23.33■■□□□ 1.32
GSDMD-212ENST00000533063 ESYT2A0FGR8 921 aa23.33■■□□□ 1.32
GSDMD-212ENST00000533063 LDHDQ86WU2 507 aa23.33■■□□□ 1.32
GSDMD-212ENST00000533063 ZNF526Q8TF50 670 aaPredicted RBP23.33■■□□□ 1.32
GSDMD-212ENST00000533063 ZNF396Q96N95 335 aaPredicted RBP23.33■■□□□ 1.32
GSDMD-212ENST00000533063 SCAND2PQ9GZW5 306 aaPredicted RBP23.33■■□□□ 1.32
GSDMD-212ENST00000533063 RTEL1Q9NZ71 1219 aa23.33■■□□□ 1.32
GSDMD-212ENST00000533063 CFAP45Q9UL16 551 aa23.33■■□□□ 1.32
GSDMD-212ENST00000533063 SMCO2A6NFE2 343 aa23.32■■□□□ 1.32
GSDMD-212ENST00000533063 USP14P54578 494 aa23.32■■□□□ 1.32
GSDMD-212ENST00000533063 HMGCS2P54868 508 aa23.32■■□□□ 1.32
GSDMD-212ENST00000533063 GALNT17Q6IS24 598 aa23.32■■□□□ 1.32
GSDMD-212ENST00000533063 RASGRP4Q8TDF6 673 aa23.32■■□□□ 1.32
GSDMD-212ENST00000533063 SPATA32Q96LK8 384 aa23.32■■□□□ 1.32
GSDMD-212ENST00000533063 C12orf42Q96LP6 360 aa23.32■■□□□ 1.32
GSDMD-212ENST00000533063 POLR3EQ9NVU0 708 aa23.32■■□□□ 1.32
GSDMD-212ENST00000533063 FEM1BQ9UK73 627 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms