RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 IKQ13123 557 aaPredicted RBP29.04■■■□□ 2.24
USP48-214ENST00000532737 TMEM132BQ14DG7 1078 aa29.04■■■□□ 2.24
USP48-214ENST00000532737 FBXO46Q6PJ61 603 aaPredicted RBP29.04■■■□□ 2.24
USP48-214ENST00000532737 REPS2Q8NFH8 660 aa29.04■■■□□ 2.24
USP48-214ENST00000532737 EFCC1Q9HA90 598 aa29.04■■■□□ 2.24
USP48-214ENST00000532737 FMNL1O95466 1100 aaPredicted RBP29.03■■■□□ 2.24
USP48-214ENST00000532737 SLC16A2P36021 539 aa29.03■■■□□ 2.24
USP48-214ENST00000532737 BLOC1S2Q6QNY1 142 aa29.03■■■□□ 2.24
USP48-214ENST00000532737 BTNL9Q6UXG8 535 aa29.03■■■□□ 2.24
USP48-214ENST00000532737 OTOP1Q7RTM1 612 aa29.03■■■□□ 2.24
USP48-214ENST00000532737 PORCNQ9H237 461 aa29.03■■■□□ 2.24
USP48-214ENST00000532737 TRIM17Q9Y577 477 aa29.03■■■□□ 2.24
USP48-214ENST00000532737 PARP14Q460N5 1801 aa29.02■■■□□ 2.24
USP48-214ENST00000532737 PSMA5P28066 241 aa29.02■■■□□ 2.24
USP48-214ENST00000532737 LIFRP42702 1097 aa29.02■■■□□ 2.24
USP48-214ENST00000532737 FCGRTP55899 365 aa29.02■■■□□ 2.24
USP48-214ENST00000532737 TMTC2Q8N394 836 aa29.02■■■□□ 2.24
USP48-214ENST00000532737 SPATC1LQ9H0A9 340 aa29.02■■■□□ 2.24
USP48-214ENST00000532737 PRR12Q9ULL5 1215 aa29.02■■■□□ 2.24
USP48-214ENST00000532737 TROAPQ12815 778 aa29.01■■■□□ 2.23
USP48-214ENST00000532737 ARHGEF6Q15052 776 aa29.01■■■□□ 2.23
USP48-214ENST00000532737 GPATCH4Q5T3I0 446 aaKnown RBP29.01■■■□□ 2.23
USP48-214ENST00000532737 MOV10L1Q9BXT6 1211 aaKnown RBP29.01■■■□□ 2.23
USP48-214ENST00000532737 SLC38A10Q9HBR0 1119 aa29.01■■■□□ 2.23
USP48-214ENST00000532737 ZNF214Q9UL59 606 aaPredicted RBP29.01■■■□□ 2.23
USP48-214ENST00000532737 A0A0G2JMZ2 1700 aa29■■■□□ 2.23
USP48-214ENST00000532737 ZSWIM8A7E2V4 1837 aa29■■■□□ 2.23
USP48-214ENST00000532737 ZBED4O75132 1171 aa29■■■□□ 2.23
USP48-214ENST00000532737 CASTP20810 708 aaKnown RBP29■■■□□ 2.23
USP48-214ENST00000532737 RPS6KB1P23443 525 aa29■■■□□ 2.23
USP48-214ENST00000532737 CCNA1P78396 465 aa29■■■□□ 2.23
USP48-214ENST00000532737 PLS1Q14651 629 aa29■■■□□ 2.23
USP48-214ENST00000532737 SYDE2Q5VT97 1194 aa29■■■□□ 2.23
USP48-214ENST00000532737 NFXL1Q6ZNB6 911 aa29■■■□□ 2.23
USP48-214ENST00000532737 CATIPQ7Z7H3 387 aa29■■■□□ 2.23
USP48-214ENST00000532737 ZSWIM6Q9HCJ5 1215 aa29■■■□□ 2.23
USP48-214ENST00000532737 PARP1P09874 1014 aaKnown RBP28.99■■■□□ 2.23
USP48-214ENST00000532737 SNAP25P60880 206 aa28.99■■■□□ 2.23
USP48-214ENST00000532737 ASPRV1Q53RT3 343 aa28.99■■■□□ 2.23
USP48-214ENST00000532737 ZNF654Q8IZM8 581 aa28.99■■■□□ 2.23
USP48-214ENST00000532737 TM6SF1Q9BZW5 370 aa28.99■■■□□ 2.23
USP48-214ENST00000532737 UBA5Q9GZZ9 404 aa28.99■■■□□ 2.23
USP48-214ENST00000532737 CPVLQ9H3G5 476 aa28.99■■■□□ 2.23
USP48-214ENST00000532737 CCDC69A6NI79 296 aa28.98■■■□□ 2.23
USP48-214ENST00000532737 TNPO2O14787 897 aaKnown RBP28.98■■■□□ 2.23
USP48-214ENST00000532737 GRM4Q14833 912 aa28.98■■■□□ 2.23
USP48-214ENST00000532737 SGMS1Q86VZ5 419 aa28.98■■■□□ 2.23
USP48-214ENST00000532737 STAG2Q8N3U4 1231 aa28.98■■■□□ 2.23
USP48-214ENST00000532737 MYL10Q9BUA6 226 aa28.98■■■□□ 2.23
USP48-214ENST00000532737 PALM3A6NDB9 673 aaPredicted RBP28.97■■■□□ 2.23
USP48-214ENST00000532737 GNRH1P01148 92 aa28.97■■■□□ 2.23
USP48-214ENST00000532737 FDX1P10109 184 aa28.97■■■□□ 2.23
USP48-214ENST00000532737 MAPK4P31152 587 aa28.97■■■□□ 2.23
USP48-214ENST00000532737 STAT3P40763 770 aa28.97■■■□□ 2.23
USP48-214ENST00000532737 ANAPC15P60006 121 aa28.97■■■□□ 2.23
USP48-214ENST00000532737 CCAR1Q8IX12 1150 aaKnown RBP28.97■■■□□ 2.23
USP48-214ENST00000532737 CPXCR1Q8N123 301 aa28.97■■■□□ 2.23
USP48-214ENST00000532737 RAVER2Q9HCJ3 691 aaKnown RBP28.97■■■□□ 2.23
USP48-214ENST00000532737 MAD2L2Q9UI95 211 aa28.97■■■□□ 2.23
USP48-214ENST00000532737 CTDP1Q9Y5B0 961 aaPredicted RBP28.97■■■□□ 2.23
USP48-214ENST00000532737 RBBP6Q7Z6E9 1792 aaKnown RBP28.96■■■□□ 2.23
USP48-214ENST00000532737 Q6ZUG5 572 aa28.96■■■□□ 2.23
USP48-214ENST00000532737 RUFY3Q7L099 469 aa28.96■■■□□ 2.23
USP48-214ENST00000532737 RIOX2Q8IUF8 465 aa28.96■■■□□ 2.23
USP48-214ENST00000532737 SHCBP1Q8NEM2 672 aa28.96■■■□□ 2.23
USP48-214ENST00000532737 NUP133Q8WUM0 1156 aa28.96■■■□□ 2.23
USP48-214ENST00000532737 SRRDQ9UH36 339 aa28.96■■■□□ 2.23
USP48-214ENST00000532737 BRPF3Q9ULD4 1205 aa28.96■■■□□ 2.23
USP48-214ENST00000532737 ATP2A1O14983 1001 aa28.95■■■□□ 2.22
USP48-214ENST00000532737 DDAH1O94760 285 aa28.95■■■□□ 2.22
USP48-214ENST00000532737 ERCC3P19447 782 aa28.95■■■□□ 2.22
USP48-214ENST00000532737 GPR142Q7Z601 462 aa28.95■■■□□ 2.22
USP48-214ENST00000532737 COA7Q96BR5 231 aa28.95■■■□□ 2.22
USP48-214ENST00000532737 TEX13BQ9BXU2 312 aa28.95■■■□□ 2.22
USP48-214ENST00000532737 UPF3BQ9BZI7 483 aaKnown RBP28.95■■■□□ 2.22
USP48-214ENST00000532737 RANBP17Q9H2T7 1088 aaKnown RBP28.95■■■□□ 2.22
USP48-214ENST00000532737 GABRQQ9UN88 632 aa28.95■■■□□ 2.22
USP48-214ENST00000532737 CYP46A1Q9Y6A2 500 aa28.95■■■□□ 2.22
USP48-214ENST00000532737 ZNF536O15090 1300 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 KLRF2D3W0D1 207 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 HOXD10P28358 340 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 PRKCZQ05513 592 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 WDR78Q5VTH9 848 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 SNRNP48Q6IEG0 339 aaKnown RBP28.94■■■□□ 2.22
USP48-214ENST00000532737 CCDC174Q6PII3 467 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 PLEKHH3Q7Z736 793 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 NCAPG2Q86XI2 1143 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 RAB11FIP4Q86YS3 637 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 IL17RAQ96F46 866 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 PTPN22Q9Y2R2 807 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 RIPK3Q9Y572 518 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 SLC12A7Q9Y666 1083 aa28.94■■■□□ 2.22
USP48-214ENST00000532737 RXRAP19793 462 aa28.93■■■□□ 2.22
USP48-214ENST00000532737 OAZ1P54368 228 aa28.93■■■□□ 2.22
USP48-214ENST00000532737 FGD1P98174 961 aa28.93■■■□□ 2.22
USP48-214ENST00000532737 MAP3K14Q99558 947 aa28.93■■■□□ 2.22
USP48-214ENST00000532737 MROH8Q9H579 483 aa28.93■■■□□ 2.22
USP48-214ENST00000532737 GJD2Q9UKL4 321 aa28.93■■■□□ 2.22
USP48-214ENST00000532737 CENPFP49454 3210 aa28.92■■■□□ 2.22
USP48-214ENST00000532737 SLC25A27O95847 323 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms