RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 DDX11Q96FC9 970 aa20.84■□□□□ 0.93
PPP1CA-208ENST00000532446 HHIPL1Q96JK4 782 aa20.84■□□□□ 0.93
PPP1CA-208ENST00000532446 RPAP3Q9H6T3 665 aaPredicted RBP20.84■□□□□ 0.93
PPP1CA-208ENST00000532446 ORC3Q9UBD5 711 aaPredicted RBP20.84■□□□□ 0.93
PPP1CA-208ENST00000532446 FEM1BQ9UK73 627 aa20.84■□□□□ 0.93
PPP1CA-208ENST00000532446 PRPF3O43395 683 aaKnown RBP20.83■□□□□ 0.93
PPP1CA-208ENST00000532446 FAM160B2Q86V87 743 aa20.83■□□□□ 0.93
PPP1CA-208ENST00000532446 RASAL3Q86YV0 1011 aa20.83■□□□□ 0.93
PPP1CA-208ENST00000532446 ADGRF4Q8IZF3 695 aa20.83■□□□□ 0.93
PPP1CA-208ENST00000532446 CHURC1Q8WUH1 139 aa20.83■□□□□ 0.93
PPP1CA-208ENST00000532446 MS4A4AQ96JQ5 239 aa20.83■□□□□ 0.93
PPP1CA-208ENST00000532446 CWC22Q9HCG8 908 aaKnown RBP20.83■□□□□ 0.93
PPP1CA-208ENST00000532446 ABT1Q9ULW3 272 aaKnown RBP20.83■□□□□ 0.93
PPP1CA-208ENST00000532446 V9GY48 417 aaPredicted RBP20.83■□□□□ 0.93
PPP1CA-208ENST00000532446 SYDE2Q5VT97 1194 aa20.82■□□□□ 0.92
PPP1CA-208ENST00000532446 FASTKD5Q7L8L6 764 aaKnown RBP20.82■□□□□ 0.92
PPP1CA-208ENST00000532446 MTMR8Q96EF0 704 aa20.82■□□□□ 0.92
PPP1CA-208ENST00000532446 JMJD4Q9H9V9 463 aa20.82■□□□□ 0.92
PPP1CA-208ENST00000532446 FBXO28Q9NVF7 368 aa20.82■□□□□ 0.92
PPP1CA-208ENST00000532446 PCNTO95613 3336 aa20.82■□□□□ 0.92
PPP1CA-208ENST00000532446 GTF2A2P52657 109 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 IKQ13123 557 aaPredicted RBP20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 TREML2Q5T2D2 321 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 GADL1Q6ZQY3 521 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 TANGO6Q9C0B7 1094 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 VAT1LQ9HCJ6 419 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 RBM27Q9P2N5 1060 aaKnown RBP20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 USP17L15C9J2P7 530 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 USP17L13C9JLJ4 530 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 USP17L11C9JVI0 530 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 USP17L18D6R9N7 530 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 USP17L22D6RA61 530 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 USP17L17D6RBQ6 530 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 USP17L19D6RCP7 530 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 USP17L20D6RJB6 530 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 DEXIO95424 95 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 SLC10A3P09131 477 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 CETPP11597 493 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 AKAP17AQ02040 695 aaKnown RBP20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 USP17L24Q0WX57 530 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 MKRN3Q13064 507 aaKnown RBP20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 PKN1Q16512 942 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 CATSPERGQ6ZRH7 1159 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 PRR12Q9ULL5 1215 aa20.81■□□□□ 0.92
PPP1CA-208ENST00000532446 hCG_1642624A0A1W2PR95 340 aa20.8■□□□□ 0.92
PPP1CA-208ENST00000532446 HOXA7P31268 230 aaPredicted RBP20.8■□□□□ 0.92
PPP1CA-208ENST00000532446 DDIT3P35638 169 aa20.8■□□□□ 0.92
PPP1CA-208ENST00000532446 PRPF38AQ8NAV1 312 aaKnown RBP20.8■□□□□ 0.92
PPP1CA-208ENST00000532446 FAM184AQ8NB25 1140 aa20.8■□□□□ 0.92
PPP1CA-208ENST00000532446 PIBF1Q8WXW3 757 aa20.8■□□□□ 0.92
PPP1CA-208ENST00000532446 RRP36Q96EU6 259 aaKnown RBP20.8■□□□□ 0.92
PPP1CA-208ENST00000532446 SLF1Q9BQI6 1058 aa20.8■□□□□ 0.92
PPP1CA-208ENST00000532446 AGTPBP1Q9UPW5 1226 aa20.8■□□□□ 0.92
PPP1CA-208ENST00000532446 RASSF10A6NK89 507 aa20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 FAM155AB1AL88 458 aaPredicted RBP20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 FLOT1O75955 427 aa20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 PFKFB3Q16875 520 aaPredicted RBP20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 GPAT2Q6NUI2 795 aa20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 WASF1Q92558 559 aa20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 CCDC102AQ96A19 550 aa20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 KIFC2Q96AC6 838 aa20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 PIGSQ96S52 555 aa20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 PPP1R9AQ9ULJ8 1098 aa20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 KIF3AQ9Y496 699 aa20.79■□□□□ 0.92
PPP1CA-208ENST00000532446 CCL15-CCL14A0A0B4J2E2 113 aa20.78■□□□□ 0.92
PPP1CA-208ENST00000532446 CCL15Q16663 113 aa20.78■□□□□ 0.92
PPP1CA-208ENST00000532446 HOMER1Q86YM7 354 aa20.78■□□□□ 0.92
PPP1CA-208ENST00000532446 BRI3BPQ8WY22 251 aa20.78■□□□□ 0.92
PPP1CA-208ENST00000532446 AIFM3Q96NN9 605 aa20.78■□□□□ 0.92
PPP1CA-208ENST00000532446 COL11A1P12107 1806 aaPredicted RBP20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 PNMA6FA0A0J9YX94 578 aa20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 ZBTB5O15062 677 aa20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 HSPA1AP0DMV8 641 aaKnown RBP20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 HSPA1BP0DMV9 641 aaKnown RBP20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 SCG2P13521 617 aa20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 VEGFBP49765 207 aa20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 COG2Q14746 738 aa20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 DEFB115Q30KQ5 88 aa20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 ALG1Q9BT22 464 aa20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 RANBP17Q9H2T7 1088 aaKnown RBP20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 SEC63Q9UGP8 760 aaKnown RBP20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 MYPNQ86TC9 1320 aa20.77■□□□□ 0.92
PPP1CA-208ENST00000532446 TESPA1A2RU30 521 aaPredicted RBP20.76■□□□□ 0.91
PPP1CA-208ENST00000532446 DSG3P32926 999 aa20.76■□□□□ 0.91
PPP1CA-208ENST00000532446 CDC37Q16543 378 aaPredicted RBP20.76■□□□□ 0.91
PPP1CA-208ENST00000532446 QRICH1Q2TAL8 776 aa20.76■□□□□ 0.91
PPP1CA-208ENST00000532446 ADAMTS5Q9UNA0 930 aa20.76■□□□□ 0.91
PPP1CA-208ENST00000532446 MANSC4A6NHS7 340 aaPredicted RBP20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 PDCP20941 246 aa20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 SNAP25P60880 206 aa20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 PABPC4Q13310 644 aaKnown RBP eCLIP20.75■□□□□ 0.917e-45■■■■■ 68.6
PPP1CA-208ENST00000532446 LARP1BQ659C4 914 aaKnown RBP20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 SAMD1Q6SPF0 538 aaPredicted RBP20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 HOXC10Q9NYD6 342 aa20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 SLC45A1Q9Y2W3 748 aa20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 SMCHD1A6NHR9 2005 aa20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 BTBD19C9JJ37 291 aa20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 PPP1R11O60927 126 aaPredicted RBP20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 FDX1P10109 184 aa20.75■□□□□ 0.91
PPP1CA-208ENST00000532446 SYT1P21579 422 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms