RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-215ENST00000531558 SNHG28P0DPA3 235 aa30.29■■■□□ 2.44
PICALM-215ENST00000531558 STAT3P40763 770 aa30.29■■■□□ 2.44
PICALM-215ENST00000531558 RIOX2Q8IUF8 465 aa30.29■■■□□ 2.44
PICALM-215ENST00000531558 MB21D2Q8IYB1 491 aaPredicted RBP30.29■■■□□ 2.44
PICALM-215ENST00000531558 PNMA1Q8ND90 353 aa30.29■■■□□ 2.44
PICALM-215ENST00000531558 USP6NLQ92738 828 aa30.29■■■□□ 2.44
PICALM-215ENST00000531558 MROH8Q9H579 483 aa30.29■■■□□ 2.44
PICALM-215ENST00000531558 IVNS1ABPQ9Y6Y0 642 aa30.29■■■□□ 2.44
PICALM-215ENST00000531558 SLC25A27O95847 323 aa30.28■■■□□ 2.44
PICALM-215ENST00000531558 ELNP15502 786 aa30.28■■■□□ 2.44
PICALM-215ENST00000531558 PTPREP23469 700 aa30.28■■■□□ 2.44
PICALM-215ENST00000531558 SEC23AQ15436 765 aa30.28■■■□□ 2.44
PICALM-215ENST00000531558 NCAPG2Q86XI2 1143 aa30.28■■■□□ 2.44
PICALM-215ENST00000531558 TEX13BQ9BXU2 312 aa30.28■■■□□ 2.44
PICALM-215ENST00000531558 CTDP1Q9Y5B0 961 aaPredicted RBP30.28■■■□□ 2.44
PICALM-215ENST00000531558 PLXNB2O15031 1838 aa30.28■■■□□ 2.44
PICALM-215ENST00000531558 COL11A1P12107 1806 aaPredicted RBP30.27■■■□□ 2.44
PICALM-215ENST00000531558 SLC15A5A6NIM6 579 aa30.27■■■□□ 2.44
PICALM-215ENST00000531558 ATP2A1O14983 1001 aa30.27■■■□□ 2.44
PICALM-215ENST00000531558 FDX1P10109 184 aa30.27■■■□□ 2.44
PICALM-215ENST00000531558 GRB14Q14449 540 aa30.27■■■□□ 2.44
PICALM-215ENST00000531558 IFIT1BQ5T764 474 aaKnown RBP30.27■■■□□ 2.44
PICALM-215ENST00000531558 RNF20Q5VTR2 975 aa30.27■■■□□ 2.44
PICALM-215ENST00000531558 FRMPD2Q68DX3 1309 aaPredicted RBP30.26■■■□□ 2.44
PICALM-215ENST00000531558 CYP2B6P20813 491 aa30.26■■■□□ 2.43
PICALM-215ENST00000531558 COPB2P35606 906 aa30.26■■■□□ 2.43
PICALM-215ENST00000531558 RGS2P41220 211 aa30.26■■■□□ 2.43
PICALM-215ENST00000531558 ZNF543Q08ER8 600 aa30.26■■■□□ 2.43
PICALM-215ENST00000531558 PRR12Q9ULL5 1215 aa30.26■■■□□ 2.43
PICALM-215ENST00000531558 XRCC5P13010 732 aaKnown RBP30.25■■■□□ 2.43
PICALM-215ENST00000531558 OAZ1P54368 228 aa30.25■■■□□ 2.43
PICALM-215ENST00000531558 ANTXR2P58335 489 aa30.25■■■□□ 2.43
PICALM-215ENST00000531558 MAP2K5Q13163 448 aa30.25■■■□□ 2.43
PICALM-215ENST00000531558 SNRNP48Q6IEG0 339 aaKnown RBP30.25■■■□□ 2.43
PICALM-215ENST00000531558 TTBK2Q6IQ55 1244 aa30.25■■■□□ 2.43
PICALM-215ENST00000531558 BTNL9Q6UXG8 535 aa30.25■■■□□ 2.43
PICALM-215ENST00000531558 APBA2Q99767 749 aa30.25■■■□□ 2.43
PICALM-215ENST00000531558 GPCPD1Q9NPB8 672 aa30.25■■■□□ 2.43
PICALM-215ENST00000531558 IFIT3O14879 490 aaKnown RBP30.24■■■□□ 2.43
PICALM-215ENST00000531558 STRNO43815 780 aa30.24■■■□□ 2.43
PICALM-215ENST00000531558 SART3Q15020 963 aaKnown RBP30.24■■■□□ 2.43
PICALM-215ENST00000531558 CHST3Q7LGC8 479 aa30.24■■■□□ 2.43
PICALM-215ENST00000531558 CPXCR1Q8N123 301 aa30.24■■■□□ 2.43
PICALM-215ENST00000531558 RAVER2Q9HCJ3 691 aaKnown RBP30.24■■■□□ 2.43
PICALM-215ENST00000531558 BIN2Q9UBW5 565 aaPredicted RBP30.24■■■□□ 2.43
PICALM-215ENST00000531558 ERICH2A1L162 156 aa30.23■■■□□ 2.43
PICALM-215ENST00000531558 REC8O95072 547 aa30.23■■■□□ 2.43
PICALM-215ENST00000531558 SLC16A2P36021 539 aa30.23■■■□□ 2.43
PICALM-215ENST00000531558 SOX10P56693 466 aa30.23■■■□□ 2.43
PICALM-215ENST00000531558 GPATCH4Q5T3I0 446 aaKnown RBP30.23■■■□□ 2.43
PICALM-215ENST00000531558 SYDE2Q5VT97 1194 aa30.23■■■□□ 2.43
PICALM-215ENST00000531558 ZNF236Q9UL36 1845 aa30.22■■■□□ 2.43
PICALM-215ENST00000531558 INHAP05111 366 aa30.22■■■□□ 2.43
PICALM-215ENST00000531558 UBXN2AP68543 259 aa30.22■■■□□ 2.43
PICALM-215ENST00000531558 ABRAQ8N0Z2 381 aa30.22■■■□□ 2.43
PICALM-215ENST00000531558 MYCP01106 439 aaPredicted RBP30.21■■■□□ 2.43
PICALM-215ENST00000531558 HMGCRP04035 888 aa30.21■■■□□ 2.43
PICALM-215ENST00000531558 HOXC6P09630 235 aa30.21■■■□□ 2.43
PICALM-215ENST00000531558 ADORA2AP29274 412 aa30.21■■■□□ 2.43
PICALM-215ENST00000531558 TRIB2Q92519 343 aa30.21■■■□□ 2.43
PICALM-215ENST00000531558 RIPK3Q9Y572 518 aa30.21■■■□□ 2.43
PICALM-215ENST00000531558 ZNF536O15090 1300 aa30.21■■■□□ 2.43
PICALM-215ENST00000531558 PRC1O43663 620 aa30.2■■■□□ 2.43
PICALM-215ENST00000531558 GOLGA8HP0CJ92 632 aa30.2■■■□□ 2.43
PICALM-215ENST00000531558 FCER1AP12319 257 aa30.2■■■□□ 2.43
PICALM-215ENST00000531558 MCM5P33992 734 aa30.2■■■□□ 2.43
PICALM-215ENST00000531558 WTAPQ15007 396 aa30.2■■■□□ 2.43
PICALM-215ENST00000531558 TMEM67Q5HYA8 995 aa30.2■■■□□ 2.43
PICALM-215ENST00000531558 TRMT44Q8IYL2 757 aaKnown RBP30.2■■■□□ 2.43
PICALM-215ENST00000531558 RASEFQ8IZ41 740 aa30.2■■■□□ 2.43
PICALM-215ENST00000531558 IGDCC4Q8TDY8 1250 aa30.2■■■□□ 2.43
PICALM-215ENST00000531558 MTA3Q9BTC8 594 aa30.2■■■□□ 2.43
PICALM-215ENST00000531558 RANBP17Q9H2T7 1088 aaKnown RBP30.2■■■□□ 2.43
PICALM-215ENST00000531558 SENP2Q9HC62 589 aa30.2■■■□□ 2.43
PICALM-215ENST00000531558 ZKSCAN1P17029 563 aaPredicted RBP30.19■■■□□ 2.42
PICALM-215ENST00000531558 SNAP25P60880 206 aa30.19■■■□□ 2.42
PICALM-215ENST00000531558 COL9A3Q14050 684 aaPredicted RBP30.19■■■□□ 2.42
PICALM-215ENST00000531558 MTFR1Q15390 333 aa30.19■■■□□ 2.42
PICALM-215ENST00000531558 TSGA10IPQ3SY00 556 aa30.19■■■□□ 2.42
PICALM-215ENST00000531558 ASPRV1Q53RT3 343 aa30.19■■■□□ 2.42
PICALM-215ENST00000531558 MMP19Q99542 508 aa30.19■■■□□ 2.42
PICALM-215ENST00000531558 SLC4A3P48751 1232 aa30.18■■■□□ 2.42
PICALM-215ENST00000531558 CCL14Q16627 93 aa30.18■■■□□ 2.42
PICALM-215ENST00000531558 CCDC174Q6PII3 467 aa30.18■■■□□ 2.42
PICALM-215ENST00000531558 TMEM106CQ9BVX2 250 aa30.18■■■□□ 2.42
PICALM-215ENST00000531558 PARP1P09874 1014 aaKnown RBP30.17■■■□□ 2.42
PICALM-215ENST00000531558 HSPA4P34932 840 aa30.17■■■□□ 2.42
PICALM-215ENST00000531558 KCTD2Q14681 263 aa30.17■■■□□ 2.42
PICALM-215ENST00000531558 DPP9Q86TI2 863 aa30.17■■■□□ 2.42
PICALM-215ENST00000531558 NPLOC4Q8TAT6 608 aa30.17■■■□□ 2.42
PICALM-215ENST00000531558 KCNB2Q92953 911 aa30.17■■■□□ 2.42
PICALM-215ENST00000531558 AGBL1Q96MI9 1066 aa30.17■■■□□ 2.42
PICALM-215ENST00000531558 BRCA2P51587 3418 aa30.16■■■□□ 2.42
PICALM-215ENST00000531558 EPB41L2O43491 1005 aaKnown RBP30.16■■■□□ 2.42
PICALM-215ENST00000531558 COBLO75128 1261 aa30.16■■■□□ 2.42
PICALM-215ENST00000531558 CCL5P13501 91 aa30.16■■■□□ 2.42
PICALM-215ENST00000531558 KRT32Q14532 448 aa30.16■■■□□ 2.42
PICALM-215ENST00000531558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.16■■■□□ 2.42
PICALM-215ENST00000531558 CHST13Q8NET6 341 aa30.16■■■□□ 2.42
PICALM-215ENST00000531558 TMEM87BQ96K49 555 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms