RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-209ENST00000531474 PABPC4Q13310 644 aaKnown RBP eCLIP10.95□□□□□ -0.66
NXF1-209ENST00000531474 CCDC96Q2M329 555 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 FAM83BQ5T0W9 1011 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 SYNE3Q6ZMZ3 975 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 NFXL1Q6ZNB6 911 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 PNMA1Q8ND90 353 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 IGDCC4Q8TDY8 1250 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 ANKS1AQ92625 1134 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 LY9Q9HBG7 655 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 SENP2Q9HC62 589 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 CFAP45Q9UL16 551 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 LOC285556D6RIA3 1793 aa10.95□□□□□ -0.66
NXF1-209ENST00000531474 CCDC69A6NI79 296 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 USP17L15C9J2P7 530 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 USP17L13C9JLJ4 530 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 USP17L11C9JVI0 530 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 USP17L18D6R9N7 530 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 USP17L22D6RA61 530 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 USP17L17D6RBQ6 530 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 USP17L19D6RCP7 530 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 USP17L20D6RJB6 530 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 ALDH1A1P00352 501 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 OSBPP22059 807 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 LIFRP42702 1097 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 SLC1A4P43007 532 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
NXF1-209ENST00000531474 MAP2K1Q02750 393 aaPredicted RBP10.94□□□□□ -0.66
NXF1-209ENST00000531474 USP17L24Q0WX57 530 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 ST3GAL1Q11201 340 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 SCRN1Q12765 414 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 PPP2R5BQ15173 497 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 TAF1CQ15572 869 aaPredicted RBP10.94□□□□□ -0.66
NXF1-209ENST00000531474 SAMD1Q6SPF0 538 aaPredicted RBP10.94□□□□□ -0.66
NXF1-209ENST00000531474 RASGRP2Q7LDG7 609 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 DCAF4Q8WV16 495 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 ANP32BQ92688 251 aaKnown RBP10.94□□□□□ -0.66
NXF1-209ENST00000531474 GMCL1Q96IK5 515 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 PARK7Q99497 189 aaKnown RBP10.94□□□□□ -0.66
NXF1-209ENST00000531474 BEGAINQ9BUH8 593 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 PNMA3Q9UL41 463 aa10.94□□□□□ -0.66
NXF1-209ENST00000531474 ELP1O95163 1332 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 FRMPD2Q68DX3 1309 aaPredicted RBP10.93□□□□□ -0.66
NXF1-209ENST00000531474 CPLX1O14810 134 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 TRPA1O75762 1119 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 FLOT1O75955 427 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 CYP2C8P10632 490 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 BMP3P12645 472 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 RCAN1P53805 252 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 CAVIN1Q6NZI2 390 aaKnown RBP10.93□□□□□ -0.66
NXF1-209ENST00000531474 CATIPQ7Z7H3 387 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 NSUN7Q8NE18 718 aaKnown RBP10.93□□□□□ -0.66
NXF1-209ENST00000531474 SMCR8Q8TEV9 937 aaPredicted RBP10.93□□□□□ -0.66
NXF1-209ENST00000531474 ASCC2Q9H1I8 757 aaPredicted RBP10.93□□□□□ -0.66
NXF1-209ENST00000531474 ZCCHC17Q9NP64 241 aaKnown RBP10.93□□□□□ -0.66
NXF1-209ENST00000531474 GPCPD1Q9NPB8 672 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 RNF186Q9NXI6 227 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 NAP1L2Q9ULW6 460 aaPredicted RBP10.93□□□□□ -0.66
NXF1-209ENST00000531474 SLC45A1Q9Y2W3 748 aa10.93□□□□□ -0.66
NXF1-209ENST00000531474 CCDC196A0A1B0GTZ2 297 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 TMEM232C9JQI7 657 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 PDHBP11177 359 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 HOXA7P31268 230 aaPredicted RBP10.92□□□□□ -0.66
NXF1-209ENST00000531474 IKQ13123 557 aaPredicted RBP10.92□□□□□ -0.66
NXF1-209ENST00000531474 CRHR2Q13324 411 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 CATSPERGQ6ZRH7 1159 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 KCTD1Q719H9 257 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 SGMS1Q86VZ5 419 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 RAB11FIP4Q86YS3 637 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 ZNF654Q8IZM8 581 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 JMYQ8N9B5 988 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 GPT2Q8TD30 523 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 NUP133Q8WUM0 1156 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 ZNF396Q96N95 335 aaPredicted RBP10.92□□□□□ -0.66
NXF1-209ENST00000531474 MYL10Q9BUA6 226 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 GRPEL1Q9HAV7 217 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 ZFYVE28Q9HCC9 887 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 FBXO28Q9NVF7 368 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 SLC12A7Q9Y666 1083 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 PTPRFP10586 1907 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 TCHHQ07283 1943 aa10.92□□□□□ -0.66
NXF1-209ENST00000531474 KLF18A0A0U1RQI7 1052 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 PTPDC1A2A3K4 754 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 GOLGA6L4A6NEF3 574 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 GOLGA8BA8MQT2 603 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 CA12O43570 354 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 DDAH1O94760 285 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 TBC1D8O95759 1140 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 PARP1P09874 1014 aaKnown RBP10.91□□□□□ -0.66
NXF1-209ENST00000531474 GOLGA8HP0CJ92 632 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 RXRAP19793 462 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 HERVK_113P62684 666 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 ZNF543Q08ER8 600 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 COG2Q14746 738 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 ZSCAN23Q3MJ62 389 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 ASPRV1Q53RT3 343 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 MICU3Q86XE3 530 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 WASF1Q92558 559 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 P2RX7Q99572 595 aaKnown RBP10.91□□□□□ -0.66
NXF1-209ENST00000531474 SLF1Q9BQI6 1058 aa10.91□□□□□ -0.66
NXF1-209ENST00000531474 WBP1LQ9NX94 342 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms