RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 GTF3C2Q8WUA4 911 aaPredicted RBP13.68□□□□□ -0.22
ACER3-210ENST00000531352 JAKMIP1Q96N16 626 aaKnown RBP13.68□□□□□ -0.22
ACER3-210ENST00000531352 MYL10Q9BUA6 226 aa13.68□□□□□ -0.22
ACER3-210ENST00000531352 TNPO2O14787 897 aaKnown RBP13.67□□□□□ -0.22
ACER3-210ENST00000531352 EPB41L2O43491 1005 aaKnown RBP13.67□□□□□ -0.22
ACER3-210ENST00000531352 FCGRTP55899 365 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 PRKCZQ05513 592 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 WTAPQ15007 396 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 STAG2Q8N3U4 1231 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 LARP6Q9BRS8 491 aaKnown RBP13.67□□□□□ -0.22
ACER3-210ENST00000531352 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
ACER3-210ENST00000531352 UBA5Q9GZZ9 404 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 SLC38A10Q9HBR0 1119 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 GJD2Q9UKL4 321 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 PRR12Q9ULL5 1215 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 PTPN22Q9Y2R2 807 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 RIPK3Q9Y572 518 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
ACER3-210ENST00000531352 SH2B2O14492 632 aaPredicted RBP13.67□□□□□ -0.22
ACER3-210ENST00000531352 PLA2G6O60733 806 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 TROAPQ12815 778 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 IKQ13123 557 aaPredicted RBP13.67□□□□□ -0.22
ACER3-210ENST00000531352 CPXCR1Q8N123 301 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 CHURC1Q8WUH1 139 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 SRRDQ9UH36 339 aa13.67□□□□□ -0.22
ACER3-210ENST00000531352 ERCC3P19447 782 aa13.66□□□□□ -0.22
ACER3-210ENST00000531352 RXRAP19793 462 aa13.66□□□□□ -0.22
ACER3-210ENST00000531352 FLT3LGP49771 235 aa13.66□□□□□ -0.22
ACER3-210ENST00000531352 SART3Q15020 963 aaKnown RBP13.66□□□□□ -0.22
ACER3-210ENST00000531352 BTNL9Q6UXG8 535 aa13.66□□□□□ -0.22
ACER3-210ENST00000531352 DHX32Q7L7V1 743 aaKnown RBP13.66□□□□□ -0.22
ACER3-210ENST00000531352 GPR142Q7Z601 462 aa13.66□□□□□ -0.22
ACER3-210ENST00000531352 TNS4Q8IZW8 715 aa13.66□□□□□ -0.22
ACER3-210ENST00000531352 RAVER2Q9HCJ3 691 aaKnown RBP13.66□□□□□ -0.22
ACER3-210ENST00000531352 PTCH2Q9Y6C5 1203 aa13.66□□□□□ -0.22
ACER3-210ENST00000531352 ZNF536O15090 1300 aa13.66□□□□□ -0.22
ACER3-210ENST00000531352 ERICH2A1L162 156 aa13.65□□□□□ -0.22
ACER3-210ENST00000531352 STAT3P40763 770 aa13.65□□□□□ -0.22
ACER3-210ENST00000531352 KRT32Q14532 448 aa13.65□□□□□ -0.22
ACER3-210ENST00000531352 SLC35G1Q2M3R5 365 aa13.65□□□□□ -0.22
ACER3-210ENST00000531352 FBXO46Q6PJ61 603 aaPredicted RBP13.65□□□□□ -0.22
ACER3-210ENST00000531352 FAM160B2Q86V87 743 aa13.65□□□□□ -0.22
ACER3-210ENST00000531352 TMEM87BQ96K49 555 aa13.65□□□□□ -0.22
ACER3-210ENST00000531352 MAD2L2Q9UI95 211 aa13.65□□□□□ -0.22
ACER3-210ENST00000531352 MYH6P13533 1939 aa13.65□□□□□ -0.22
ACER3-210ENST00000531352 MAPK4P31152 587 aa13.65□□□□□ -0.22
ACER3-210ENST00000531352 WDR78Q5VTH9 848 aa13.65□□□□□ -0.22
ACER3-210ENST00000531352 DTNBO60941 627 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 ZBED4O75132 1171 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 GNRH1P01148 92 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 CASTP20810 708 aaKnown RBP13.64□□□□□ -0.23
ACER3-210ENST00000531352 LIFRP42702 1097 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 SLC4A3P48751 1232 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 PKN2Q16513 984 aaKnown RBP13.64□□□□□ -0.23
ACER3-210ENST00000531352 GPATCH4Q5T3I0 446 aaKnown RBP13.64□□□□□ -0.23
ACER3-210ENST00000531352 SYDE2Q5VT97 1194 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 SNRNP48Q6IEG0 339 aaKnown RBP13.64□□□□□ -0.23
ACER3-210ENST00000531352 NBPF11Q86T75 865 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 NCAPG2Q86XI2 1143 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 RIOX2Q8IUF8 465 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 COA7Q96BR5 231 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 AGBL1Q96MI9 1066 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 MTA3Q9BTC8 594 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 HPS5Q9UPZ3 1129 aa13.64□□□□□ -0.23
ACER3-210ENST00000531352 PALM3A6NDB9 673 aaPredicted RBP13.63□□□□□ -0.23
ACER3-210ENST00000531352 PARP1P09874 1014 aaKnown RBP13.63□□□□□ -0.23
ACER3-210ENST00000531352 CCNA1P78396 465 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 ARHGEF6Q15052 776 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 MORN1Q5T089 497 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 CCDC174Q6PII3 467 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 PLEKHH3Q7Z736 793 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 CCAR1Q8IX12 1150 aaKnown RBP13.63□□□□□ -0.23
ACER3-210ENST00000531352 CCDC144CPQ8IYA2 1237 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 ZNF654Q8IZM8 581 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 TEX13BQ9BXU2 312 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 BRPF3Q9ULD4 1205 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 RPS6KB1P23443 525 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 ASPRV1Q53RT3 343 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 ADGRF4Q8IZF3 695 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 NUP133Q8WUM0 1156 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 USP6NLQ92738 828 aa13.63□□□□□ -0.23
ACER3-210ENST00000531352 RANBP17Q9H2T7 1088 aaKnown RBP13.63□□□□□ -0.23
ACER3-210ENST00000531352 KLRF2D3W0D1 207 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 ELNP15502 786 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 PTPREP23469 700 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 HOXD10P28358 340 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 GRM4Q14833 912 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 BLOC1S2Q6QNY1 142 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 NFXL1Q6ZNB6 911 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 CATIPQ7Z7H3 387 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 SGMS1Q86VZ5 419 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 CMTR1Q8N1G2 835 aaKnown RBP13.62□□□□□ -0.23
ACER3-210ENST00000531352 SHCBP1Q8NEM2 672 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 SH3TC2Q8TF17 1288 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 ABHD8Q96I13 439 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 KIF2CQ99661 725 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
ACER3-210ENST00000531352 VAT1LQ9HCJ6 419 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms