RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	LZTS2	Q9BRK4	669 aa		24.82	■■□□□ 1.56
PABPC4-225	ENST00000531243	RBM28	Q9NW13	759 aa	Known RBP	24.82	■■□□□ 1.56
PABPC4-225	ENST00000531243		A0A0G2JMZ2	1700 aa		24.81	■■□□□ 1.56
PABPC4-225	ENST00000531243	FAM110C	Q1W6H9	321 aa		24.81	■■□□□ 1.56
PABPC4-225	ENST00000531243	C17orf99	Q6UX52	265 aa		24.81	■■□□□ 1.56
PABPC4-225	ENST00000531243	MICU3	Q86XE3	530 aa		24.81	■■□□□ 1.56
PABPC4-225	ENST00000531243	PAGR1	Q9BTK6	254 aa		24.81	■■□□□ 1.56
PABPC4-225	ENST00000531243	FBXO28	Q9NVF7	368 aa		24.81	■■□□□ 1.56
PABPC4-225	ENST00000531243	CPA4	Q9UI42	421 aa		24.81	■■□□□ 1.56
PABPC4-225	ENST00000531243	ADGRA2	Q96PE1	1338 aa		24.81	■■□□□ 1.56
PABPC4-225	ENST00000531243	CCDC196	A0A1B0GTZ2	297 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	GPR25	O00155	361 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	GOLGA8H	P0CJ92	632 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	CTCF	P49711	727 aa	Predicted RBP	24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	CCNA1	P78396	465 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	APOBR	Q0VD83	1088 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	KIF22	Q14807	665 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	SYDE2	Q5VT97	1194 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	ANKRD13C	Q8N6S4	541 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	GPRC5A	Q8NFJ5	357 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	ATG4C	Q96DT6	458 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	MAD2L2	Q9UI95	211 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	PNMA2	Q9UL42	364 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	ADAMTS5	Q9UNA0	930 aa		24.8	■■□□□ 1.56
PABPC4-225	ENST00000531243	PALM3	A6NDB9	673 aa	Predicted RBP	24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	KLRF2	D3W0D1	207 aa		24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	VWA5A	O00534	786 aa		24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	DHX16	O60231	1041 aa	Known RBP	24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	ST18	O60284	1047 aa		24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	SP3	Q02447	781 aa		24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	TOB2	Q14106	344 aa	Predicted RBP	24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	ARHGEF6	Q15052	776 aa		24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	CCAR1	Q8IX12	1150 aa	Known RBP	24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	FANCB	Q8NB91	859 aa		24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	MYL10	Q9BUA6	226 aa		24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	MORF4L1	Q9UBU8	362 aa		24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	PRR12	Q9ULL5	1215 aa		24.79	■■□□□ 1.56
PABPC4-225	ENST00000531243	GOLGA8A	A7E2F4	631 aa		24.78	■■□□□ 1.56
PABPC4-225	ENST00000531243	GOLGA8B	A8MQT2	603 aa		24.78	■■□□□ 1.56
PABPC4-225	ENST00000531243	FKTN	O75072	461 aa		24.78	■■□□□ 1.56
PABPC4-225	ENST00000531243	BCR	P11274	1271 aa		24.78	■■□□□ 1.56
PABPC4-225	ENST00000531243	METAP2	P50579	478 aa	Known RBP eCLIP	24.78	■■□□□ 1.56	5e-9	■□□□□ 10.6
PABPC4-225	ENST00000531243	EVC	P57679	992 aa		24.78	■■□□□ 1.56
PABPC4-225	ENST00000531243	TTBK2	Q6IQ55	1244 aa		24.78	■■□□□ 1.56
PABPC4-225	ENST00000531243	RASGRP2	Q7LDG7	609 aa		24.78	■■□□□ 1.56
PABPC4-225	ENST00000531243	ZNF274	Q96GC6	653 aa	Predicted RBP	24.78	■■□□□ 1.56
PABPC4-225	ENST00000531243	BRPF3	Q9ULD4	1205 aa		24.78	■■□□□ 1.56
PABPC4-225	ENST00000531243	MGAM	O43451	1857 aa		24.78	■■□□□ 1.56
PABPC4-225	ENST00000531243	SMARCA1	P28370	1054 aa		24.77	■■□□□ 1.56
PABPC4-225	ENST00000531243	COPB2	P35606	906 aa		24.77	■■□□□ 1.56
PABPC4-225	ENST00000531243	SLC16A2	P36021	539 aa		24.77	■■□□□ 1.56
PABPC4-225	ENST00000531243	OAZ1	P54368	228 aa		24.77	■■□□□ 1.56
PABPC4-225	ENST00000531243	ERVK-9	P63128	1117 aa		24.77	■■□□□ 1.56
PABPC4-225	ENST00000531243	ERVK-24	P63145	666 aa		24.77	■■□□□ 1.56
PABPC4-225	ENST00000531243	RTN1	Q16799	776 aa		24.77	■■□□□ 1.56
PABPC4-225	ENST00000531243	ERO1A	Q96HE7	468 aa		24.77	■■□□□ 1.56
PABPC4-225	ENST00000531243	RBPJL	Q9UBG7	517 aa		24.77	■■□□□ 1.56
PABPC4-225	ENST00000531243	AK2	P54819	239 aa		24.76	■■□□□ 1.55
PABPC4-225	ENST00000531243	PLS1	Q14651	629 aa		24.76	■■□□□ 1.55
PABPC4-225	ENST00000531243	STAG2	Q8N3U4	1231 aa		24.76	■■□□□ 1.55
PABPC4-225	ENST00000531243	KIF2C	Q99661	725 aa		24.76	■■□□□ 1.55
PABPC4-225	ENST00000531243	UBA5	Q9GZZ9	404 aa		24.76	■■□□□ 1.55
PABPC4-225	ENST00000531243	R3HDML	Q9H3Y0	253 aa		24.76	■■□□□ 1.55
PABPC4-225	ENST00000531243	SLC38A10	Q9HBR0	1119 aa		24.76	■■□□□ 1.55
PABPC4-225	ENST00000531243	CWC22	Q9HCG8	908 aa	Known RBP	24.76	■■□□□ 1.55
PABPC4-225	ENST00000531243	TSKS	Q9UJT2	592 aa		24.76	■■□□□ 1.55
PABPC4-225	ENST00000531243	ATP2A1	O14983	1001 aa		24.75	■■□□□ 1.55
PABPC4-225	ENST00000531243	FOXN1	O15353	648 aa		24.75	■■□□□ 1.55
PABPC4-225	ENST00000531243	SLC25A27	O95847	323 aa		24.75	■■□□□ 1.55
PABPC4-225	ENST00000531243	RXRA	P19793	462 aa		24.75	■■□□□ 1.55
PABPC4-225	ENST00000531243	CCDC144CP	Q8IYA2	1237 aa		24.75	■■□□□ 1.55
PABPC4-225	ENST00000531243	STAT3	P40763	770 aa		24.74	■■□□□ 1.55
PABPC4-225	ENST00000531243	TRAF1	Q13077	416 aa		24.74	■■□□□ 1.55
PABPC4-225	ENST00000531243	ADGRF4	Q8IZF3	695 aa		24.74	■■□□□ 1.55
PABPC4-225	ENST00000531243	TEX13B	Q9BXU2	312 aa		24.74	■■□□□ 1.55
PABPC4-225	ENST00000531243	SPATC1L	Q9H0A9	340 aa		24.74	■■□□□ 1.55
PABPC4-225	ENST00000531243	RANBP17	Q9H2T7	1088 aa	Known RBP	24.74	■■□□□ 1.55
PABPC4-225	ENST00000531243	BTBD7	Q9P203	1132 aa		24.74	■■□□□ 1.55
PABPC4-225	ENST00000531243	NID2	Q14112	1375 aa		24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	HSPA8	P11142	646 aa	Known RBP	24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	PDIA3	P30101	505 aa	Known RBP	24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	MAPK4	P31152	587 aa		24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	TMEM132B	Q14DG7	1078 aa		24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	CPLX2	Q6PUV4	134 aa	Known RBP	24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	RAB11FIP4	Q86YS3	637 aa		24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	CPXCR1	Q8N123	301 aa		24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	ZNF296	Q8WUU4	475 aa	Predicted RBP	24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	SPZ1	Q9BXG8	430 aa		24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	SLK	Q9H2G2	1235 aa	Predicted RBP	24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	RIOX1	Q9H6W3	641 aa		24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	VAT1L	Q9HCJ6	419 aa		24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	TXNRD2	Q9NNW7	524 aa		24.73	■■□□□ 1.55
PABPC4-225	ENST00000531243	CNMD	O75829	334 aa		24.72	■■□□□ 1.55
PABPC4-225	ENST00000531243	FCGRT	P55899	365 aa		24.72	■■□□□ 1.55
PABPC4-225	ENST00000531243	LACTB	P83111	547 aa	Predicted RBP	24.72	■■□□□ 1.55
PABPC4-225	ENST00000531243	SHCBP1	Q8NEM2	672 aa		24.72	■■□□□ 1.55
PABPC4-225	ENST00000531243	REPS2	Q8NFH8	660 aa		24.72	■■□□□ 1.55
PABPC4-225	ENST00000531243	SEC63	Q9UGP8	760 aa	Known RBP	24.72	■■□□□ 1.55
PABPC4-225	ENST00000531243	CASP8AP2	Q9UKL3	1982 aa		24.72	■■□□□ 1.55
PABPC4-225	ENST00000531243	BAZ2B	Q9UIF8	2168 aa	Known RBP	24.71	■■□□□ 1.55

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms