RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 FGD4Q96M96 766 aa15.96■□□□□ 0.15
HIF3A-214ENST00000531043 SPTBN5Q9NRC6 3674 aaKnown RBP15.96■□□□□ 0.15
HIF3A-214ENST00000531043 ROBO3Q96MS0 1386 aa15.96■□□□□ 0.15
HIF3A-214ENST00000531043 SYNRGQ9UMZ2 1314 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 DNAJC25-GNG10A0A024R161 153 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 GSG1L2A8MUP6 293 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 ADCY6O43306 1168 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 AKR1A1P14550 325 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 SLC4A3P48751 1232 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 ACLYP53396 1101 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 FAAP100Q0VG06 881 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 C20orf194Q5TEA3 1177 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 SNRNP48Q6IEG0 339 aaKnown RBP15.95■□□□□ 0.14
HIF3A-214ENST00000531043 CCSAPQ6IQ19 270 aaPredicted RBP15.95■□□□□ 0.14
HIF3A-214ENST00000531043 AMOTL1Q8IY63 956 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 OSBP2Q969R2 916 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 SLF1Q9BQI6 1058 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 DDX19BQ9UMR2 479 aa15.95■□□□□ 0.14
HIF3A-214ENST00000531043 F5H6K3 240 aa15.94■□□□□ 0.14
HIF3A-214ENST00000531043 RAG1P15918 1043 aa15.94■□□□□ 0.14
HIF3A-214ENST00000531043 KLRC3Q07444 240 aa15.94■□□□□ 0.14
HIF3A-214ENST00000531043 KCNA10Q16322 511 aa15.94■□□□□ 0.14
HIF3A-214ENST00000531043 CPXCR1Q8N123 301 aa15.94■□□□□ 0.14
HIF3A-214ENST00000531043 DDRGK1Q96HY6 314 aa15.94■□□□□ 0.14
HIF3A-214ENST00000531043 TEX13BQ9BXU2 312 aa15.94■□□□□ 0.14
HIF3A-214ENST00000531043 EPB41L4AQ9HCS5 686 aaPredicted RBP15.94■□□□□ 0.14
HIF3A-214ENST00000531043 TMEM39AQ9NV64 488 aa15.94■□□□□ 0.14
HIF3A-214ENST00000531043 ZHX1Q9UKY1 873 aaPredicted RBP15.94■□□□□ 0.14
HIF3A-214ENST00000531043 CNPY2Q9Y2B0 182 aa15.94■□□□□ 0.14
HIF3A-214ENST00000531043 IGKV6D-41A0A0C4DH26 115 aa15.93■□□□□ 0.14
HIF3A-214ENST00000531043 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
HIF3A-214ENST00000531043 PRDM1O75626 825 aa15.93■□□□□ 0.14
HIF3A-214ENST00000531043 SBK1Q52WX2 424 aa15.93■□□□□ 0.14
HIF3A-214ENST00000531043 ANKRD33Q7Z3H0 272 aa15.93■□□□□ 0.14
HIF3A-214ENST00000531043 USP38Q8NB14 1042 aa15.93■□□□□ 0.14
HIF3A-214ENST00000531043 RAVER2Q9HCJ3 691 aaKnown RBP15.93■□□□□ 0.14
HIF3A-214ENST00000531043 STARD7Q9NQZ5 370 aa15.93■□□□□ 0.14
HIF3A-214ENST00000531043 NYAP2Q9P242 653 aa15.93■□□□□ 0.14
HIF3A-214ENST00000531043 ARPP21Q9UBL0 812 aaPredicted RBP15.93■□□□□ 0.14
HIF3A-214ENST00000531043 MS4A1P11836 297 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 FOSL2P15408 326 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 COPB2P35606 906 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 FPGSQ05932 587 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 GRIN2CQ14957 1233 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 MAMDC4Q6UXC1 1216 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 DDX11Q96FC9 970 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 TSEN34Q9BSV6 310 aaKnown RBP15.92■□□□□ 0.14
HIF3A-214ENST00000531043 LRRCC1Q9C099 1032 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 CLIP2Q9UDT6 1046 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 TBX21Q9UL17 535 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 FAM184BQ9ULE4 1060 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 SYNGAP1Q96PV0 1343 aa15.92■□□□□ 0.14
HIF3A-214ENST00000531043 CHD9Q3L8U1 2897 aa15.91■□□□□ 0.14
HIF3A-214ENST00000531043 M0R2C6 588 aa15.91■□□□□ 0.14
HIF3A-214ENST00000531043 PTGS1P23219 599 aa15.91■□□□□ 0.14
HIF3A-214ENST00000531043 C16orf59Q7L2K0 433 aa15.91■□□□□ 0.14
HIF3A-214ENST00000531043 LRRC47Q8N1G4 583 aaKnown RBP15.91■□□□□ 0.14
HIF3A-214ENST00000531043 KIFC2Q96AC6 838 aa15.91■□□□□ 0.14
HIF3A-214ENST00000531043 CHMP4CQ96CF2 233 aa15.91■□□□□ 0.14
HIF3A-214ENST00000531043 TOX2Q96NM4 488 aa15.91■□□□□ 0.14
HIF3A-214ENST00000531043 MKNK2Q9HBH9 465 aa15.91■□□□□ 0.14
HIF3A-214ENST00000531043 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.91■□□□□ 0.14
HIF3A-214ENST00000531043 DDX49Q9Y6V7 483 aaKnown RBP15.91■□□□□ 0.14
HIF3A-214ENST00000531043 NCOR1O75376 2440 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 GRXCR1A8MXD5 290 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 ATP2A1O14983 1001 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 CTAGE5O15320 804 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 DUSP11O75319 330 aaKnown RBP15.9■□□□□ 0.14
HIF3A-214ENST00000531043 TIMP1P01033 207 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 DNAJB2P25686 324 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 ACVR2BQ13705 512 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 ZSCAN25Q6NSZ9 544 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 MSL3Q8N5Y2 521 aaKnown RBP15.9■□□□□ 0.14
HIF3A-214ENST00000531043 KBTBD3Q8NAB2 608 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 PRPF38AQ8NAV1 312 aaKnown RBP15.9■□□□□ 0.14
HIF3A-214ENST00000531043 CEP95Q96GE4 821 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.9■□□□□ 0.14
HIF3A-214ENST00000531043 SLC38A10Q9HBR0 1119 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 ECHDC1Q9NTX5 307 aa15.9■□□□□ 0.14
HIF3A-214ENST00000531043 MOXD2PA6NHM9 499 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 DCDC2CA8MYV0 355 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 GPAA1O43292 621 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 ASGR1P07306 291 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 C6orf222P0C671 652 aaPredicted RBP15.89■□□□□ 0.13
HIF3A-214ENST00000531043 PBX2P40425 430 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 CDK7P50613 346 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 CNTN2Q02246 1040 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 CCDC144BQ3MJ40 725 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 ARMCX2Q7L311 632 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 APPBP2Q92624 585 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 KATNBL1Q9H079 304 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 UPF3AQ9H1J1 476 aaKnown RBP15.89■□□□□ 0.13
HIF3A-214ENST00000531043 PRDM6Q9NQX0 595 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 MTMR4Q9NYA4 1195 aa15.89■□□□□ 0.13
HIF3A-214ENST00000531043 CHD7Q9P2D1 2997 aa15.88■□□□□ 0.13
HIF3A-214ENST00000531043 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-214ENST00000531043 RNF113AO15541 343 aaKnown RBP15.88■□□□□ 0.13
HIF3A-214ENST00000531043 ZBED4O75132 1171 aa15.88■□□□□ 0.13
HIF3A-214ENST00000531043 ACRP10323 421 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms