RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 FDPSP14324 419 aaKnown RBP11.42□□□□□ -0.58
CTNND1-228ENST00000531007 SUPT20HL1Q3ZLR7 823 aa11.42□□□□□ -0.58
CTNND1-228ENST00000531007 GMCL1P1Q8NEA9 526 aa11.42□□□□□ -0.58
CTNND1-228ENST00000531007 FBXO18Q8NFZ0 1043 aa11.42□□□□□ -0.58
CTNND1-228ENST00000531007 DDX11Q96FC9 970 aa11.42□□□□□ -0.58
CTNND1-228ENST00000531007 C8orf76Q96K31 380 aa11.42□□□□□ -0.58
CTNND1-228ENST00000531007 TMEM39BQ9GZU3 492 aa11.42□□□□□ -0.58
CTNND1-228ENST00000531007 ZDHHC9Q9Y397 364 aa11.42□□□□□ -0.58
CTNND1-228ENST00000531007 VPS37CA5D8V6 355 aaPredicted RBP11.41□□□□□ -0.58
CTNND1-228ENST00000531007 hCG_1984214I3L0E3 225 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 CAP2P40123 477 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 PTPN5P54829 565 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 ICA1Q05084 483 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 ANGEL2Q5VTE6 544 aaKnown RBP11.41□□□□□ -0.58
CTNND1-228ENST00000531007 NBPF11Q86T75 865 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
CTNND1-228ENST00000531007 ZNF713Q8N859 430 aaPredicted RBP11.41□□□□□ -0.58
CTNND1-228ENST00000531007 DCAF4Q8WV16 495 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 ZFRQ96KR1 1074 aaKnown RBP11.41□□□□□ -0.58
CTNND1-228ENST00000531007 TEPSINQ96N21 525 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 MYL10Q9BUA6 226 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 SPZ1Q9BXG8 430 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 SLC26A6Q9BXS9 759 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 ZNF341Q9BYN7 854 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 ARHGEF10LQ9HCE6 1279 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 SH3GLB2Q9NR46 395 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 CLIP2Q9UDT6 1046 aa11.41□□□□□ -0.58
CTNND1-228ENST00000531007 SCN4AP35499 1836 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 SHTN1A0MZ66 631 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 CTNND1O60716 968 aaKnown RBP11.4□□□□□ -0.58
CTNND1-228ENST00000531007 BAG4O95429 457 aaKnown RBP11.4□□□□□ -0.58
CTNND1-228ENST00000531007 RXRAP19793 462 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 EPS15P42566 896 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 FUT2Q10981 343 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 SAFBQ15424 915 aaKnown RBP eCLIP11.4□□□□□ -0.58
CTNND1-228ENST00000531007 NFKBIBQ15653 356 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 BRAPQ7Z569 592 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 TEX2Q8IWB9 1127 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 CCDC144CPQ8IYA2 1237 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 ZNF784Q8NCA9 323 aaPredicted RBP11.4□□□□□ -0.58
CTNND1-228ENST00000531007 TRPM4Q8TD43 1214 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 DCPSQ96C86 337 aaKnown RBP11.4□□□□□ -0.58
CTNND1-228ENST00000531007 GMCL1Q96IK5 515 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 ALG1Q9BT22 464 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 MAD2L2Q9UI95 211 aa11.4□□□□□ -0.58
CTNND1-228ENST00000531007 KLRF2D3W0D1 207 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 EGFRP00533 1210 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 GH2P01242 217 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 PDHBP11177 359 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 MCM4P33991 863 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 TRAF1Q13077 416 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 PKP1Q13835 747 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 SKOR2Q2VWA4 1001 aaPredicted RBP11.39□□□□□ -0.59
CTNND1-228ENST00000531007 GALNT17Q6IS24 598 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 SULF1Q8IWU6 871 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 CCDC12Q8WUD4 166 aaPredicted RBP11.39□□□□□ -0.59
CTNND1-228ENST00000531007 PHKBQ93100 1093 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 ANP32EQ9BTT0 268 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 BRMS1Q9HCU9 246 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 GOPCQ9HD26 462 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 NPDC1Q9NQX5 325 aaPredicted RBP11.39□□□□□ -0.59
CTNND1-228ENST00000531007 GGA3Q9NZ52 723 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 ZNF112Q9UJU3 913 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 CFAP45Q9UL16 551 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 ZBTB21Q9ULJ3 1066 aa11.39□□□□□ -0.59
CTNND1-228ENST00000531007 CNTNAP5Q8WYK1 1306 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 PHF20L1A8MW92 1017 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 PLA2G6O60733 806 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 EEF2P13639 858 aaKnown RBP11.38□□□□□ -0.59
CTNND1-228ENST00000531007 CALML3P27482 149 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 GUCY1A2P33402 732 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 EPHX2P34913 555 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 HIRAP54198 1017 aaPredicted RBP11.38□□□□□ -0.59
CTNND1-228ENST00000531007 KRT85P78386 507 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 SEPT2Q15019 361 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 PFKFB3Q16875 520 aaPredicted RBP11.38□□□□□ -0.59
CTNND1-228ENST00000531007 USP48Q86UV5 1035 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 RAB11FIP4Q86YS3 637 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 SRBD1Q8N5C6 995 aaKnown RBP11.38□□□□□ -0.59
CTNND1-228ENST00000531007 CCDC148Q8NFR7 591 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 RRP36Q96EU6 259 aaKnown RBP11.38□□□□□ -0.59
CTNND1-228ENST00000531007 ZNF396Q96N95 335 aaPredicted RBP11.38□□□□□ -0.59
CTNND1-228ENST00000531007 SCAND2PQ9GZW5 306 aaPredicted RBP11.38□□□□□ -0.59
CTNND1-228ENST00000531007 FOXP1Q9H334 677 aaPredicted RBP11.38□□□□□ -0.59
CTNND1-228ENST00000531007 RIOX1Q9H6W3 641 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 AS3MTQ9HBK9 375 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 TMX2Q9Y320 296 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 WDR90Q96KV7 1748 aa11.38□□□□□ -0.59
CTNND1-228ENST00000531007 UNCXA6NJT0 531 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 FAM196BA6NMK8 535 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 PPP1R12BO60237 982 aaPredicted RBP11.37□□□□□ -0.59
CTNND1-228ENST00000531007 GDF11O95390 407 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 PLEKHA8P1O95397 391 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 SCG2P13521 617 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 NF2P35240 595 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 USP14P54578 494 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 ZNF543Q08ER8 600 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 SLFN13Q68D06 897 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 SMYD5Q6GMV2 418 aa11.37□□□□□ -0.59
CTNND1-228ENST00000531007 CDC37L1Q7L3B6 337 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms