RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 A0A1W2PQD8 194 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 ERICH2A1L162 156 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 KCNQ2O43526 872 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 BNIP3LO60238 219 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 JAK2O60674 1132 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 CTDNEP1O95476 244 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 CHGBP05060 677 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 APPP05067 770 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 COL8A1P27658 744 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 ANTXR2P58335 489 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 RPS8P62241 208 aaKnown RBP6.46□□□□□ -1.38
PCF11-205ENST00000530906 USP4Q13107 963 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 AKNAD1Q5T1N1 836 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 SPTY2D1Q68D10 685 aaPredicted RBP6.46□□□□□ -1.38
PCF11-205ENST00000530906 TTLL5Q6EMB2 1281 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 APOA5Q6Q788 366 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 PI16Q6UXB8 463 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 CCDC73Q6ZRK6 1079 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 MFSD6Q6ZSS7 791 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 C15orf52Q6ZUT6 534 aaKnown RBP6.46□□□□□ -1.38
PCF11-205ENST00000530906 TMC4Q7Z404 712 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 FBXO33Q7Z6M2 555 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 NBPF5PQ86XG9 351 aaPredicted RBP6.46□□□□□ -1.38
PCF11-205ENST00000530906 VPS37DQ86XT2 251 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 IFNL3Q8IZI9 196 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 PGBD3Q8N328 593 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 MAGEB6Q8N7X4 407 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 JMYQ8N9B5 988 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 FBXO18Q8NFZ0 1043 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 RHBDD1Q8TEB9 315 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 EDARADDQ8WWZ3 215 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 C8orf76Q96K31 380 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 NOL10Q9BSC4 688 aaKnown RBP6.46□□□□□ -1.38
PCF11-205ENST00000530906 CRISPLD1Q9H336 500 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 CLSTN2Q9H4D0 955 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 GDPD2Q9HCC8 539 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 SEC31BQ9NQW1 1179 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 RTEL1Q9NZ71 1219 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 CCNL1Q9UK58 526 aaPredicted RBP6.46□□□□□ -1.38
PCF11-205ENST00000530906 TRPC5Q9UL62 973 aaPredicted RBP6.46□□□□□ -1.38
PCF11-205ENST00000530906 WWC3Q9ULE0 1092 aa6.46□□□□□ -1.38
PCF11-205ENST00000530906 CCDC88AQ3V6T2 1871 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 GSG1L2A8MUP6 293 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 ZBTB43O43298 467 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 MBD4O95243 580 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 SLC3A2P08195 630 aaKnown RBP6.45□□□□□ -1.38
PCF11-205ENST00000530906 TDO2P48775 406 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 METAP2P50579 478 aaKnown RBP eCLIP6.45□□□□□ -1.38
PCF11-205ENST00000530906 HAND2P61296 217 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 TRIM29Q14134 588 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 FERMT3Q86UX7 667 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 TBC1D10CQ8IV04 446 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 FAM177A1Q8N128 213 aaPredicted RBP6.45□□□□□ -1.38
PCF11-205ENST00000530906 GOLGA6L1Q8N7Z2 621 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 FAM200AQ8TCP9 573 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 BICD2Q8TD16 824 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 IGDCC4Q8TDY8 1250 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 ESR2Q92731 530 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 DDX11Q96FC9 970 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 ABHD17AQ96GS6 310 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 FUCA2Q9BTY2 467 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 LRRC2Q9BYS8 371 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 TNMDQ9H2S6 317 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 ORC3Q9UBD5 711 aaPredicted RBP6.45□□□□□ -1.38
PCF11-205ENST00000530906 USP25Q9UHP3 1055 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 MKL2Q9ULH7 1088 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 NOL7Q9UMY1 257 aaKnown RBP6.45□□□□□ -1.38
PCF11-205ENST00000530906 MINPP1Q9UNW1 487 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 DOLKQ9UPQ8 538 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 LEMD3Q9Y2U8 911 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 MORC2Q9Y6X9 1032 aaPredicted RBP6.45□□□□□ -1.38
PCF11-205ENST00000530906 CACNA1SQ13698 1873 aa6.45□□□□□ -1.38
PCF11-205ENST00000530906 CCDC69A6NI79 296 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 GOLGA6L6A8MZA4 724 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 KINO60870 393 aaKnown RBP6.44□□□□□ -1.38
PCF11-205ENST00000530906 FGRP09769 529 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 CALM1P0DP23 149 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 CALM2P0DP24 149 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 CALM3P0DP25 149 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 FDPSP14324 419 aaKnown RBP6.44□□□□□ -1.38
PCF11-205ENST00000530906 IFNAR1P17181 557 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 FGFR3P22607 806 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 CYP7A1P22680 504 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 MSNP26038 577 aaKnown RBP6.44□□□□□ -1.38
PCF11-205ENST00000530906 RFC4P35249 363 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 SCNN1DP51172 638 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 CCT2P78371 535 aaKnown RBP6.44□□□□□ -1.38
PCF11-205ENST00000530906 GSTO1P78417 241 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 CTBSQ01459 385 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 FAM160A1Q05DH4 1040 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 COL9A3Q14050 684 aaPredicted RBP6.44□□□□□ -1.38
PCF11-205ENST00000530906 FOXD4L6Q3SYB3 417 aaPredicted RBP6.44□□□□□ -1.38
PCF11-205ENST00000530906 SLFNL1Q499Z3 407 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 CCDC178Q5BJE1 867 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 TMEM67Q5HYA8 995 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 EFHC2Q5JST6 749 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 TRAPPC3LQ5T215 181 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 TBC1D9BQ66K14 1250 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 ADALQ6DHV7 355 aa6.44□□□□□ -1.38
PCF11-205ENST00000530906 FOXD4L3Q6VB84 417 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms