RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SIGLEC6O43699 453 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 HK2P52789 917 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 TEKQ02763 1124 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 FYB2Q5VWT5 728 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 CCDC144CPQ8IYA2 1237 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 USHBP1Q8N6Y0 703 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 TCTN2Q96GX1 697 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 CCDC120Q96HB5 630 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 PCDHB12Q9Y5F1 795 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 LTBP3Q9NS15 1303 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 KIF13AQ9H1H9 1805 aa11.05□□□□□ -0.64
CSDE1-213ENST00000530784 AFMP43652 599 aa11.04□□□□□ -0.64
CSDE1-213ENST00000530784 ZNF655Q8N720 491 aaPredicted RBP11.04□□□□□ -0.64
CSDE1-213ENST00000530784 FAM168AQ92567 244 aa11.04□□□□□ -0.64
CSDE1-213ENST00000530784 CAPN10Q9HC96 672 aa11.04□□□□□ -0.64
CSDE1-213ENST00000530784 FAM86C1Q9NVL1 165 aa11.04□□□□□ -0.64
CSDE1-213ENST00000530784 GFOD1Q9NXC2 390 aa11.04□□□□□ -0.64
CSDE1-213ENST00000530784 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.04□□□□□ -0.64
CSDE1-213ENST00000530784 ADCY10Q96PN6 1610 aa11.04□□□□□ -0.64
CSDE1-213ENST00000530784 ABCC10Q5T3U5 1492 aa11.04□□□□□ -0.64
CSDE1-213ENST00000530784 E9PSI1 815 aa11.03□□□□□ -0.64
CSDE1-213ENST00000530784 ATF4P18848 351 aaPredicted RBP11.03□□□□□ -0.64
CSDE1-213ENST00000530784 C7orf61Q8IZ16 206 aa11.03□□□□□ -0.64
CSDE1-213ENST00000530784 OR6P1Q8NGX9 317 aa11.03□□□□□ -0.64
CSDE1-213ENST00000530784 FMNL2Q96PY5 1086 aa11.03□□□□□ -0.64
CSDE1-213ENST00000530784 CHST7Q9NS84 486 aa11.03□□□□□ -0.64
CSDE1-213ENST00000530784 SHOXO15266 292 aa11.02□□□□□ -0.65
CSDE1-213ENST00000530784 TP53P04637 393 aaPredicted RBP11.02□□□□□ -0.65
CSDE1-213ENST00000530784 ZGLP1P0C6A0 271 aa11.02□□□□□ -0.65
CSDE1-213ENST00000530784 ERVFC1P60507 584 aa11.02□□□□□ -0.65
CSDE1-213ENST00000530784 AXDND1Q5T1B0 1012 aaPredicted RBP11.02□□□□□ -0.65
CSDE1-213ENST00000530784 DCAF15Q66K64 600 aa11.02□□□□□ -0.65
CSDE1-213ENST00000530784 FOXP3Q9BZS1 431 aa11.02□□□□□ -0.65
CSDE1-213ENST00000530784 ZNF214Q9UL59 606 aaPredicted RBP11.02□□□□□ -0.65
CSDE1-213ENST00000530784 DIP2BQ9P265 1576 aa11.02□□□□□ -0.65
CSDE1-213ENST00000530784 A0A1W2PQH9 124 aa11.01□□□□□ -0.65
CSDE1-213ENST00000530784 MEIS1O00470 390 aa11.01□□□□□ -0.65
CSDE1-213ENST00000530784 RNF111Q6ZNA4 994 aa11.01□□□□□ -0.65
CSDE1-213ENST00000530784 ZSWIM9Q86XI8 627 aa11.01□□□□□ -0.65
CSDE1-213ENST00000530784 KIRREL1Q96J84 757 aa11.01□□□□□ -0.65
CSDE1-213ENST00000530784 IGSF5Q9NSI5 407 aa11.01□□□□□ -0.65
CSDE1-213ENST00000530784 PPP2R5EQ16537 467 aa11□□□□□ -0.65
CSDE1-213ENST00000530784 KCNMB1Q16558 191 aa11□□□□□ -0.65
CSDE1-213ENST00000530784 FAM169BQ8N8A8 192 aa11□□□□□ -0.65
CSDE1-213ENST00000530784 C19orf47Q8N9M1 422 aaKnown RBP11□□□□□ -0.65
CSDE1-213ENST00000530784 SMARCC1Q92922 1105 aaPredicted RBP11□□□□□ -0.65
CSDE1-213ENST00000530784 EBF1Q9UH73 591 aa11□□□□□ -0.65
CSDE1-213ENST00000530784 TCFL5Q9UL49 500 aa11□□□□□ -0.65
CSDE1-213ENST00000530784 CARMIL1Q5VZK9 1371 aa11□□□□□ -0.65
CSDE1-213ENST00000530784 SYPP08247 313 aa10.99□□□□□ -0.65
CSDE1-213ENST00000530784 PCBP3P57721 371 aaKnown RBP10.99□□□□□ -0.65
CSDE1-213ENST00000530784 LINC00116Q8NCU8 138 aa10.99□□□□□ -0.65
CSDE1-213ENST00000530784 ANAPC16Q96DE5 110 aa10.99□□□□□ -0.65
CSDE1-213ENST00000530784 STRIP2Q9ULQ0 834 aa10.99□□□□□ -0.65
CSDE1-213ENST00000530784 PCDHB10Q9UN67 800 aa10.99□□□□□ -0.65
CSDE1-213ENST00000530784 ZNF281Q9Y2X9 895 aa10.99□□□□□ -0.65
CSDE1-213ENST00000530784 SLC12A7Q9Y666 1083 aa10.99□□□□□ -0.65
CSDE1-213ENST00000530784 SSU72P8A0A1W2PR75 194 aa10.98□□□□□ -0.65
CSDE1-213ENST00000530784 HPXP02790 462 aa10.98□□□□□ -0.65
CSDE1-213ENST00000530784 RAC2P15153 192 aa10.98□□□□□ -0.65
CSDE1-213ENST00000530784 RPL10P27635 214 aaKnown RBP10.98□□□□□ -0.65
CSDE1-213ENST00000530784 CTSKP43235 329 aa10.98□□□□□ -0.65
CSDE1-213ENST00000530784 BBS9Q3SYG4 887 aa10.98□□□□□ -0.65
CSDE1-213ENST00000530784 ANKRD39Q53RE8 183 aa10.98□□□□□ -0.65
CSDE1-213ENST00000530784 VPS37DQ86XT2 251 aa10.98□□□□□ -0.65
CSDE1-213ENST00000530784 DHX38Q92620 1227 aaKnown RBP10.98□□□□□ -0.65
CSDE1-213ENST00000530784 SYTL4Q96C24 671 aaPredicted RBP10.98□□□□□ -0.65
CSDE1-213ENST00000530784 PTPRGP23470 1445 aa10.98□□□□□ -0.65
CSDE1-213ENST00000530784 FKTNO75072 461 aa10.97□□□□□ -0.65
CSDE1-213ENST00000530784 GNPTABQ3T906 1256 aa10.97□□□□□ -0.65
CSDE1-213ENST00000530784 PDZD8Q8NEN9 1154 aa10.97□□□□□ -0.65
CSDE1-213ENST00000530784 MYLIPQ8WY64 445 aa10.97□□□□□ -0.65
CSDE1-213ENST00000530784 TINF2Q9BSI4 451 aa10.97□□□□□ -0.65
CSDE1-213ENST00000530784 SP110Q9HB58 689 aa10.97□□□□□ -0.65
CSDE1-213ENST00000530784 PRR13Q9NZ81 148 aa10.97□□□□□ -0.65
CSDE1-213ENST00000530784 ZNF451Q9Y4E5 1061 aa10.97□□□□□ -0.65
CSDE1-213ENST00000530784 IQGAP2Q13576 1575 aa10.97□□□□□ -0.65
CSDE1-213ENST00000530784 ZNF503-AS2A6NEH8 195 aa10.96□□□□□ -0.65
CSDE1-213ENST00000530784 TRHRP34981 398 aaPredicted RBP10.96□□□□□ -0.65
CSDE1-213ENST00000530784 CASP7P55210 303 aa10.96□□□□□ -0.65
CSDE1-213ENST00000530784 GNL2Q13823 731 aaKnown RBP10.96□□□□□ -0.65
CSDE1-213ENST00000530784 WAPLQ7Z5K2 1190 aa10.96□□□□□ -0.65
CSDE1-213ENST00000530784 ABHD4Q8TB40 342 aa10.96□□□□□ -0.65
CSDE1-213ENST00000530784 PHAXQ9H814 394 aaKnown RBP10.96□□□□□ -0.65
CSDE1-213ENST00000530784 GP6Q9HCN6 339 aa10.96□□□□□ -0.65
CSDE1-213ENST00000530784 MRVI1Q9Y6F6 885 aa10.96□□□□□ -0.65
CSDE1-213ENST00000530784 TNIKQ9UKE5 1360 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 TMEM82A0PJX8 343 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 CD247P20963 164 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 ZNF445P59923 1031 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 TMEM67Q5HYA8 995 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 CRTC3Q6UUV7 619 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 ZPBP2Q6X784 338 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 LINC01599Q8WXQ3 324 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 BRF1Q92994 677 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 G6PC3Q9BUM1 346 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 DSCC1Q9BVC3 393 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 C19orf44Q9H6X5 657 aa10.95□□□□□ -0.66
CSDE1-213ENST00000530784 TTBK1Q5TCY1 1321 aaPredicted RBP10.94□□□□□ -0.66
CSDE1-213ENST00000530784 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms