RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 DDX11Q96FC9 970 aa17.82■□□□□ 0.44
LTBP3-216ENST00000530426 LLPHQ9BRT6 129 aaKnown RBP17.82■□□□□ 0.44
LTBP3-216ENST00000530426 AGTPBP1Q9UPW5 1226 aa17.82■□□□□ 0.44
LTBP3-216ENST00000530426 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
LTBP3-216ENST00000530426 PTPDC1A2A3K4 754 aa17.81■□□□□ 0.44
LTBP3-216ENST00000530426 MANSC4A6NHS7 340 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-216ENST00000530426 JAK2O60674 1132 aa17.81■□□□□ 0.44
LTBP3-216ENST00000530426 IFNAR1P17181 557 aa17.81■□□□□ 0.44
LTBP3-216ENST00000530426 OSBPP22059 807 aa17.81■□□□□ 0.44
LTBP3-216ENST00000530426 CATSPERGQ6ZRH7 1159 aa17.81■□□□□ 0.44
LTBP3-216ENST00000530426 NBPF11Q86T75 865 aa17.81■□□□□ 0.44
LTBP3-216ENST00000530426 HOMER1Q86YM7 354 aa17.81■□□□□ 0.44
LTBP3-216ENST00000530426 NSUN7Q8NE18 718 aaKnown RBP17.81■□□□□ 0.44
LTBP3-216ENST00000530426 MS4A4AQ96JQ5 239 aa17.81■□□□□ 0.44
LTBP3-216ENST00000530426 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
LTBP3-216ENST00000530426 FBXO28Q9NVF7 368 aa17.81■□□□□ 0.44
LTBP3-216ENST00000530426 CTDP1Q9Y5B0 961 aaPredicted RBP17.81■□□□□ 0.44
LTBP3-216ENST00000530426 FAM155AB1AL88 458 aaPredicted RBP17.8■□□□□ 0.44
LTBP3-216ENST00000530426 CTDNEP1O95476 244 aa17.8■□□□□ 0.44
LTBP3-216ENST00000530426 IRX3P78415 501 aaPredicted RBP17.8■□□□□ 0.44
LTBP3-216ENST00000530426 NTRK3Q16288 839 aa17.8■□□□□ 0.44
LTBP3-216ENST00000530426 ADGRF4Q8IZF3 695 aa17.8■□□□□ 0.44
LTBP3-216ENST00000530426 FAM184AQ8NB25 1140 aa17.8■□□□□ 0.44
LTBP3-216ENST00000530426 BRI3BPQ8WY22 251 aa17.8■□□□□ 0.44
LTBP3-216ENST00000530426 RRP36Q96EU6 259 aaKnown RBP17.8■□□□□ 0.44
LTBP3-216ENST00000530426 SPZ1Q9BXG8 430 aa17.8■□□□□ 0.44
LTBP3-216ENST00000530426 ORC3Q9UBD5 711 aaPredicted RBP17.8■□□□□ 0.44
LTBP3-216ENST00000530426 PRR12Q9ULL5 1215 aa17.8■□□□□ 0.44
LTBP3-216ENST00000530426 V9GY48 417 aaPredicted RBP17.8■□□□□ 0.44
LTBP3-216ENST00000530426 LOC285556D6RIA3 1793 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 CNTNAP5Q8WYK1 1306 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 PTPRFP10586 1907 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 hCG_1642624A0A1W2PR95 340 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 RASSF10A6NK89 507 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 FMNL1O95466 1100 aaPredicted RBP17.79■□□□□ 0.44
LTBP3-216ENST00000530426 SMARCA1P28370 1054 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 SNAP25P60880 206 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 HTRA3P83110 453 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 MOGSQ13724 837 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 COG2Q14746 738 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 BTNL9Q6UXG8 535 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 PRPF38AQ8NAV1 312 aaKnown RBP17.79■□□□□ 0.44
LTBP3-216ENST00000530426 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
LTBP3-216ENST00000530426 CAPNS2Q96L46 248 aa17.79■□□□□ 0.44
LTBP3-216ENST00000530426 IPO9Q96P70 1041 aaKnown RBP17.79■□□□□ 0.44
LTBP3-216ENST00000530426 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
LTBP3-216ENST00000530426 BTBD19C9JJ37 291 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 PDHXO00330 501 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 PRPF3O43395 683 aaKnown RBP17.78■□□□□ 0.44
LTBP3-216ENST00000530426 CYTH3O43739 400 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 PLA2G6O60733 806 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 GJB2P29033 226 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 HMGN5P82970 282 aaKnown RBP17.78■□□□□ 0.44
LTBP3-216ENST00000530426 KIF23Q02241 960 aaPredicted RBP17.78■□□□□ 0.44
LTBP3-216ENST00000530426 SREBF2Q12772 1141 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 GPAT2Q6NUI2 795 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 PIGSQ96S52 555 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 RNF26Q9BY78 433 aaPredicted RBP17.78■□□□□ 0.44
LTBP3-216ENST00000530426 RIOX1Q9H6W3 641 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 JMJD4Q9H9V9 463 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 PNMA3Q9UL41 463 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 PPP1R9AQ9ULJ8 1098 aa17.78■□□□□ 0.44
LTBP3-216ENST00000530426 ZBED4O75132 1171 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 HOXA7P31268 230 aaPredicted RBP17.77■□□□□ 0.44
LTBP3-216ENST00000530426 DSG3P32926 999 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 FOSBP53539 338 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 C1QTNF8P60827 252 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 FUT2Q10981 343 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 CDC37Q16543 378 aaPredicted RBP17.77■□□□□ 0.44
LTBP3-216ENST00000530426 SLC35G1Q2M3R5 365 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 CCDC174Q6PII3 467 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 ANKRD23Q86SG2 305 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 SMARCC2Q8TAQ2 1214 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 WASF1Q92558 559 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 HOXC10Q9NYD6 342 aa17.77■□□□□ 0.44
LTBP3-216ENST00000530426 RBM27Q9P2N5 1060 aaKnown RBP17.77■□□□□ 0.44
LTBP3-216ENST00000530426 STK36Q9NRP7 1315 aa17.76■□□□□ 0.43
LTBP3-216ENST00000530426 AOC2O75106 756 aa17.76■□□□□ 0.43
LTBP3-216ENST00000530426 DEXIO95424 95 aa17.76■□□□□ 0.43
LTBP3-216ENST00000530426 INHBEP58166 350 aa17.76■□□□□ 0.43
LTBP3-216ENST00000530426 NOGQ13253 232 aa17.76■□□□□ 0.43
LTBP3-216ENST00000530426 OTUD7BQ6GQQ9 843 aa17.76■□□□□ 0.43
LTBP3-216ENST00000530426 FAM43AQ8N2R8 423 aa17.76■□□□□ 0.43
LTBP3-216ENST00000530426 ATG4CQ96DT6 458 aa17.76■□□□□ 0.43
LTBP3-216ENST00000530426 P2RX7Q99572 595 aaKnown RBP17.76■□□□□ 0.43
LTBP3-216ENST00000530426 ASCC2Q9H1I8 757 aaPredicted RBP17.76■□□□□ 0.43
LTBP3-216ENST00000530426 KIF3AQ9Y496 699 aa17.76■□□□□ 0.43
LTBP3-216ENST00000530426 WDR33Q9C0J8 1336 aaKnown RBP17.75■□□□□ 0.43
LTBP3-216ENST00000530426 TESPA1A2RU30 521 aaPredicted RBP17.75■□□□□ 0.43
LTBP3-216ENST00000530426 ZBTB5O15062 677 aa17.75■□□□□ 0.43
LTBP3-216ENST00000530426 QRICH1Q2TAL8 776 aa17.75■□□□□ 0.43
LTBP3-216ENST00000530426 HEATR3Q7Z4Q2 680 aa17.75■□□□□ 0.43
LTBP3-216ENST00000530426 CPXCR1Q8N123 301 aa17.75■□□□□ 0.43
LTBP3-216ENST00000530426 PTPN18Q99952 460 aa17.75■□□□□ 0.43
LTBP3-216ENST00000530426 ALG1Q9BT22 464 aa17.75■□□□□ 0.43
LTBP3-216ENST00000530426 RANBP17Q9H2T7 1088 aaKnown RBP17.75■□□□□ 0.43
LTBP3-216ENST00000530426 SLC45A1Q9Y2W3 748 aa17.75■□□□□ 0.43
LTBP3-216ENST00000530426 MYPNQ86TC9 1320 aa17.74■□□□□ 0.43
LTBP3-216ENST00000530426 PNMA6FA0A0J9YX94 578 aa17.74■□□□□ 0.43
LTBP3-216ENST00000530426 SPDYE16A6NNV3 312 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms