RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 FAAP100Q0VG06 881 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 MAP3K12Q12852 859 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 MTX1Q13505 466 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 RNF180Q86T96 592 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 SPOCK2Q92563 424 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 CLUAP1Q96AJ1 413 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 ASB2Q96Q27 587 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 PPP1R12CQ9BZL4 782 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 CCDC8Q9H0W5 538 aaPredicted RBP4.29□□□□□ -1.72
PTPRC-213ENST00000529828 ANTXR1Q9H6X2 564 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 STARD7Q9NQZ5 370 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 DBNLQ9UJU6 430 aaKnown RBP4.29□□□□□ -1.72
PTPRC-213ENST00000529828 HDAC5Q9UQL6 1122 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 FOCADQ5VW36 1801 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 PIEZO1Q92508 2521 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 SMIM22K7EJ46 135 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 GNAI2P04899 355 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 CSF2RAP15509 400 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 TFF2Q03403 129 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 MYO9BQ13459 2157 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 COG2Q14746 738 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 TMEM132BQ14DG7 1078 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 LAPTM4AQ15012 233 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 C1orf53Q5VUE5 145 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 C16orf59Q7L2K0 433 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 IL27Q8NEV9 243 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 DYNLL2Q96FJ2 89 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 MMP19Q99542 508 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 BCL11AQ9H165 835 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 EHD4Q9H223 541 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 NKX2-4Q9H2Z4 354 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 FBXO28Q9NVF7 368 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 MYO5AQ9Y4I1 1855 aaKnown RBP4.29□□□□□ -1.72
PTPRC-213ENST00000529828 ZNF236Q9UL36 1845 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 SYNRGQ9UMZ2 1314 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 A0A0G2JMZ2 1700 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 DCDC2CA8MYV0 355 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 STRNO43815 780 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 ADAMTS4O75173 837 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 BCAR3O75815 825 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 ZNF865P0CJ78 1059 aaPredicted RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 FCER1AP12319 257 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 SLC4A3P48751 1232 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 ACLYP53396 1101 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 RARSP54136 660 aaKnown RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 MRPS5P82675 430 aaKnown RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 TMEM240Q5SV17 173 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 ZNF365Q70YC5 407 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 TTC6Q86TZ1 520 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 SHCBP1Q8NEM2 672 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 SDR42E1Q8WUS8 393 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 ATXN2LQ8WWM7 1075 aaKnown RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 FRAT1Q92837 279 aaPredicted RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 TINF2Q9BSI4 451 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 MROH8Q9H579 483 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 MCM9Q9NXL9 1143 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 SLC5A4Q9NY91 659 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 HOXC10Q9NYD6 342 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 CXXC1Q9P0U4 656 aaPredicted RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 ZHX1Q9UKY1 873 aaPredicted RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 PCDHGA4Q9Y5G9 962 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 MYH1P12882 1939 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 SURF6O75683 361 aaKnown RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 TIMP1P01033 207 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 AKR1A1P14550 325 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 AKR1B1P15121 316 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 PTGS1P23219 599 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 CYP2C18P33260 490 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 KCNQ1P51787 676 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 RABGGTBP53611 331 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 ICA1Q05084 483 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 KCTD2Q14681 263 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 SKIV2LQ15477 1246 aaKnown RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 KCNA10Q16322 511 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 ZNF792Q3KQV3 632 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 Q6ZNB5 142 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 VTI1AQ96AJ9 217 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 RIOK1Q9BRS2 568 aaKnown RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 TBX21Q9UL17 535 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 CNPY2Q9Y2B0 182 aa4.28□□□□□ -1.72
PTPRC-213ENST00000529828 YBX2Q9Y2T7 364 aaKnown RBP4.28□□□□□ -1.72
PTPRC-213ENST00000529828 UMODL1Q5DID0 1318 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 NAV1Q8NEY1 1877 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 CYP2D7A0A087X1C5 515 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 MAGEB6P1A0A0J9YX57 407 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 RFXAPO00287 272 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 ADCY6O43306 1168 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 C6orf222P0C671 652 aaPredicted RBP4.27□□□□□ -1.73
PTPRC-213ENST00000529828 TRIM27P14373 513 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 MYOGP15173 224 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 GABPAQ06546 454 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 PPIGQ13427 754 aaKnown RBP eCLIP4.27□□□□□ -1.73
PTPRC-213ENST00000529828 SLFNL1Q499Z3 407 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 MFSD5Q6N075 450 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 OTOP2Q7RTS6 562 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 ANKRD33Q7Z3H0 272 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 SIAH1Q8IUQ4 282 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 ABRAQ8N0Z2 381 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 LCORLQ8N3X6 602 aa4.27□□□□□ -1.73
PTPRC-213ENST00000529828 MB21D1Q8N884 522 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms