RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 DOCK1Q14185 1865 aa19.12■□□□□ 0.65
PACS1-209ENST00000529757 PNMA6FA0A0J9YX94 578 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 GADD45BO75293 160 aaPredicted RBP19.11■□□□□ 0.65
PACS1-209ENST00000529757 UBE2HP62256 183 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 GALNT17Q6IS24 598 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 TYW1BQ6NUM6 668 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 SPICE1Q8N0Z3 855 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 KLRG1Q96E93 195 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 MTMR8Q96EF0 704 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 FEZ1Q99689 392 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 GLIS2Q9BZE0 524 aaPredicted RBP19.11■□□□□ 0.65
PACS1-209ENST00000529757 FTOQ9C0B1 505 aaKnown RBP eCLIP19.11■□□□□ 0.65
PACS1-209ENST00000529757 RTEL1Q9NZ71 1219 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 RCOR1Q9UKL0 485 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 WDR90Q96KV7 1748 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 USP17L10C9JJH3 530 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 TMEM232C9JQI7 657 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 NAPAP54920 295 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 IKQ13123 557 aaPredicted RBP19.11■□□□□ 0.65
PACS1-209ENST00000529757 KIAA1755Q5JYT7 1200 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 BTNL9Q6UXG8 535 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 PNMA8AQ86V59 439 aaPredicted RBP19.11■□□□□ 0.65
PACS1-209ENST00000529757 PICK1Q9NRD5 415 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 POLR3EQ9NVU0 708 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 PCDHA4Q9UN74 947 aa19.11■□□□□ 0.65
PACS1-209ENST00000529757 POLR2AP24928 1970 aaKnown RBP19.11■□□□□ 0.65
PACS1-209ENST00000529757 ZBTB5O15062 677 aa19.1■□□□□ 0.65
PACS1-209ENST00000529757 ZYXQ15942 572 aaKnown RBP19.1■□□□□ 0.65
PACS1-209ENST00000529757 EAPPQ56P03 285 aaPredicted RBP19.1■□□□□ 0.65
PACS1-209ENST00000529757 SYDE2Q5VT97 1194 aa19.1■□□□□ 0.65
PACS1-209ENST00000529757 DAGLBQ8NCG7 672 aa19.1■□□□□ 0.65
PACS1-209ENST00000529757 GPT2Q8TD30 523 aa19.1■□□□□ 0.65
PACS1-209ENST00000529757 ZKSCAN4Q969J2 545 aaPredicted RBP19.1■□□□□ 0.65
PACS1-209ENST00000529757 FZD1Q9UP38 647 aa19.1■□□□□ 0.65
PACS1-209ENST00000529757 POTECB2RU33 542 aa19.09■□□□□ 0.65
PACS1-209ENST00000529757 YEATS4O95619 227 aa19.09■□□□□ 0.65
PACS1-209ENST00000529757 NASPP49321 788 aaPredicted RBP19.09■□□□□ 0.65
PACS1-209ENST00000529757 RILPL1Q5EBL4 403 aa19.09■□□□□ 0.65
PACS1-209ENST00000529757 FAM83BQ5T0W9 1011 aa19.09■□□□□ 0.65
PACS1-209ENST00000529757 ANO1Q5XXA6 986 aa19.09■□□□□ 0.65
PACS1-209ENST00000529757 BLIDQ8IZY5 108 aa19.09■□□□□ 0.65
PACS1-209ENST00000529757 TNFRSF25Q93038 417 aa19.09■□□□□ 0.65
PACS1-209ENST00000529757 KIAA1683Q9H0B3 1180 aa19.09■□□□□ 0.65
PACS1-209ENST00000529757 AS3MTQ9HBK9 375 aa19.09■□□□□ 0.65
PACS1-209ENST00000529757 CLIC4Q9Y696 253 aa19.09■□□□□ 0.65
PACS1-209ENST00000529757 STK38Q15208 465 aa19.08■□□□□ 0.65
PACS1-209ENST00000529757 NOL9Q5SY16 702 aaKnown RBP19.08■□□□□ 0.65
PACS1-209ENST00000529757 PPP1R18Q6NYC8 613 aa19.08■□□□□ 0.65
PACS1-209ENST00000529757 WDR18Q9BV38 432 aa19.08■□□□□ 0.65
PACS1-209ENST00000529757 ZMYND12Q9H0C1 365 aa19.08■□□□□ 0.65
PACS1-209ENST00000529757 C6orf50Q9HD87 102 aa19.08■□□□□ 0.65
PACS1-209ENST00000529757 ESYT2A0FGR8 921 aa19.08■□□□□ 0.64
PACS1-209ENST00000529757 PPP1R12BO60237 982 aaPredicted RBP19.08■□□□□ 0.64
PACS1-209ENST00000529757 USP2O75604 605 aaPredicted RBP19.08■□□□□ 0.64
PACS1-209ENST00000529757 PTPRAP18433 802 aa19.08■□□□□ 0.64
PACS1-209ENST00000529757 STAT2P52630 851 aa19.08■□□□□ 0.64
PACS1-209ENST00000529757 PRKG1Q13976 671 aa19.08■□□□□ 0.64
PACS1-209ENST00000529757 CDC37Q16543 378 aaPredicted RBP19.08■□□□□ 0.64
PACS1-209ENST00000529757 DLK2Q6UY11 383 aa19.08■□□□□ 0.64
PACS1-209ENST00000529757 LINC00301Q8NCQ3 95 aa19.08■□□□□ 0.64
PACS1-209ENST00000529757 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.08■□□□□ 0.64
PACS1-209ENST00000529757 LPAR1Q92633 364 aa19.08■□□□□ 0.64
PACS1-209ENST00000529757 GOLGA6L4A6NEF3 574 aa19.07■□□□□ 0.64
PACS1-209ENST00000529757 SMCO2A6NFE2 343 aa19.07■□□□□ 0.64
PACS1-209ENST00000529757 PLA2G6O60733 806 aa19.07■□□□□ 0.64
PACS1-209ENST00000529757 GNA11P29992 359 aa19.07■□□□□ 0.64
PACS1-209ENST00000529757 QRICH1Q2TAL8 776 aa19.07■□□□□ 0.64
PACS1-209ENST00000529757 KCNG4Q8TDN1 519 aa19.07■□□□□ 0.64
PACS1-209ENST00000529757 CHURC1Q8WUH1 139 aa19.07■□□□□ 0.64
PACS1-209ENST00000529757 COA7Q96BR5 231 aa19.07■□□□□ 0.64
PACS1-209ENST00000529757 CDCA5Q96FF9 252 aa19.07■□□□□ 0.64
PACS1-209ENST00000529757 NOL7Q9UMY1 257 aaKnown RBP19.07■□□□□ 0.64
PACS1-209ENST00000529757 PPP1R11O60927 126 aaPredicted RBP19.06■□□□□ 0.64
PACS1-209ENST00000529757 NF2P35240 595 aa19.06■□□□□ 0.64
PACS1-209ENST00000529757 TOB1P50616 345 aaPredicted RBP19.06■□□□□ 0.64
PACS1-209ENST00000529757 USP14P54578 494 aa19.06■□□□□ 0.64
PACS1-209ENST00000529757 SF3A1Q15459 793 aaKnown RBP19.06■□□□□ 0.64
PACS1-209ENST00000529757 PRR12Q9ULL5 1215 aa19.06■□□□□ 0.64
PACS1-209ENST00000529757 FAM205CA6NFA0 338 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 M0R2N6 131 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 WDR46O15213 610 aaKnown RBP19.05■□□□□ 0.64
PACS1-209ENST00000529757 MAP3K9P80192 1104 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 MTMR2Q13614 643 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 TPRNQ4KMQ1 711 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 EARS2Q5JPH6 523 aaKnown RBP19.05■□□□□ 0.64
PACS1-209ENST00000529757 FAM160B2Q86V87 743 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 ZNF280CQ8ND82 737 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 BICD2Q8TD16 824 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 FEM1BQ9UK73 627 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 ADAMTS3O15072 1205 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 SPTLC2O15270 562 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 ME1P48163 572 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 IREB2P48200 963 aaKnown RBP19.05■□□□□ 0.64
PACS1-209ENST00000529757 SPP2Q13103 211 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 SLC39A14Q15043 492 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 PIK3AP1Q6ZUJ8 805 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 PGBD1Q96JS3 809 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 PCDHA6Q9UN73 950 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 PCDHA8Q9Y5H6 950 aa19.05■□□□□ 0.64
PACS1-209ENST00000529757 ZHX2Q9Y6X8 837 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms