RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 SYNGAP1Q96PV0 1343 aa18.62■□□□□ 0.57
CTSB-215ENST00000528965 PLIN4Q96Q06 1357 aa18.62■□□□□ 0.57
CTSB-215ENST00000528965 LTBP2Q14767 1821 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 IGKV6D-41A0A0C4DH26 115 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 PATL2C9JE40 543 aaKnown RBP18.61■□□□□ 0.57
CTSB-215ENST00000528965 ATP2A1O14983 1001 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 TSPY3P0CV98 308 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 TSPY8P0CW00 308 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 GMCL1P1Q8NEA9 526 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 FERMT2Q96AC1 680 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 KIFC2Q96AC6 838 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 CEP95Q96GE4 821 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 NAPBQ9H115 298 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 MTMR10Q9NXD2 777 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 MTMR4Q9NYA4 1195 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 FEM1BQ9UK73 627 aa18.61■□□□□ 0.57
CTSB-215ENST00000528965 PRDM1O75626 825 aa18.6■□□□□ 0.57
CTSB-215ENST00000528965 FDX1P10109 184 aa18.6■□□□□ 0.57
CTSB-215ENST00000528965 OAZ1P54368 228 aa18.6■□□□□ 0.57
CTSB-215ENST00000528965 FAM109BQ6ICB4 259 aaPredicted RBP18.6■□□□□ 0.57
CTSB-215ENST00000528965 IFNL3Q8IZI9 196 aa18.6■□□□□ 0.57
CTSB-215ENST00000528965 CPXCR1Q8N123 301 aa18.6■□□□□ 0.57
CTSB-215ENST00000528965 MKL1Q969V6 931 aa18.6■□□□□ 0.57
CTSB-215ENST00000528965 PDLIM7Q9NR12 457 aa18.6■□□□□ 0.57
CTSB-215ENST00000528965 PLXNA1Q9UIW2 1896 aa18.6■□□□□ 0.57
CTSB-215ENST00000528965 PGK1P00558 417 aa18.59■□□□□ 0.57
CTSB-215ENST00000528965 ZNF865P0CJ78 1059 aaPredicted RBP18.59■□□□□ 0.57
CTSB-215ENST00000528965 SLC4A3P48751 1232 aa18.59■□□□□ 0.57
CTSB-215ENST00000528965 ZNF467Q7Z7K2 595 aaPredicted RBP18.59■□□□□ 0.57
CTSB-215ENST00000528965 LRRC47Q8N1G4 583 aaKnown RBP18.59■□□□□ 0.57
CTSB-215ENST00000528965 TSEN34Q9BSV6 310 aaKnown RBP18.59■□□□□ 0.57
CTSB-215ENST00000528965 SLC38A10Q9HBR0 1119 aa18.59■□□□□ 0.57
CTSB-215ENST00000528965 ZHX1Q9UKY1 873 aaPredicted RBP18.59■□□□□ 0.57
CTSB-215ENST00000528965 FAM184BQ9ULE4 1060 aa18.59■□□□□ 0.57
CTSB-215ENST00000528965 ISY1Q9ULR0 285 aaKnown RBP18.59■□□□□ 0.57
CTSB-215ENST00000528965 ZNFX1Q9P2E3 1918 aaKnown RBP18.59■□□□□ 0.57
CTSB-215ENST00000528965 A0A1W2PQ45 241 aaPredicted RBP18.58■□□□□ 0.56
CTSB-215ENST00000528965 A0A1W2PQY0 241 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 TAL1P17542 331 aaPredicted RBP18.58■□□□□ 0.56
CTSB-215ENST00000528965 MX1P20591 662 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 PPARAQ07869 468 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 ZNF697Q5TEC3 545 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 MAMDC4Q6UXC1 1216 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.58■□□□□ 0.56
CTSB-215ENST00000528965 ANKRD35Q8N283 1001 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 CHST13Q8NET6 341 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 NEDD1Q8NHV4 660 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 PI4K2BQ8TCG2 481 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 NUP133Q8WUM0 1156 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 TACC3Q9Y6A5 838 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 MYH4Q9Y623 1939 aa18.58■□□□□ 0.56
CTSB-215ENST00000528965 DNAJC25-GNG10A0A024R161 153 aa18.57■□□□□ 0.56
CTSB-215ENST00000528965 CLTBP09497 229 aa18.57■□□□□ 0.56
CTSB-215ENST00000528965 BMP3P12645 472 aa18.57■□□□□ 0.56
CTSB-215ENST00000528965 TLE2Q04725 743 aa18.57■□□□□ 0.56
CTSB-215ENST00000528965 ZMYM1Q5SVZ6 1142 aa18.57■□□□□ 0.56
CTSB-215ENST00000528965 SLFN13Q68D06 897 aa18.57■□□□□ 0.56
CTSB-215ENST00000528965 BADQ92934 168 aa18.57■□□□□ 0.56
CTSB-215ENST00000528965 SPC25Q9HBM1 224 aa18.57■□□□□ 0.56
CTSB-215ENST00000528965 RAVER2Q9HCJ3 691 aaKnown RBP18.57■□□□□ 0.56
CTSB-215ENST00000528965 RIPK3Q9Y572 518 aa18.57■□□□□ 0.56
CTSB-215ENST00000528965 SYNRGQ9UMZ2 1314 aa18.56■□□□□ 0.56
CTSB-215ENST00000528965 MOXD2PA6NHM9 499 aa18.56■□□□□ 0.56
CTSB-215ENST00000528965 STAT2P52630 851 aa18.56■□□□□ 0.56
CTSB-215ENST00000528965 IKQ13123 557 aaPredicted RBP18.56■□□□□ 0.56
CTSB-215ENST00000528965 FAM160B2Q86V87 743 aa18.56■□□□□ 0.56
CTSB-215ENST00000528965 STARD7Q9NQZ5 370 aa18.56■□□□□ 0.56
CTSB-215ENST00000528965 POTEB2H3BUK9 544 aa18.55■□□□□ 0.56
CTSB-215ENST00000528965 DLL1O00548 723 aa18.55■□□□□ 0.56
CTSB-215ENST00000528965 PQBP1O60828 265 aaKnown RBP18.55■□□□□ 0.56
CTSB-215ENST00000528965 ADAMTS4O75173 837 aa18.55■□□□□ 0.56
CTSB-215ENST00000528965 SLC1A4P43007 532 aa18.55■□□□□ 0.56
CTSB-215ENST00000528965 TFAP4Q01664 338 aa18.55■□□□□ 0.56
CTSB-215ENST00000528965 CHURC1Q8WUH1 139 aa18.55■□□□□ 0.56
CTSB-215ENST00000528965 LENG1Q96BZ8 264 aaPredicted RBP18.55■□□□□ 0.56
CTSB-215ENST00000528965 GMCL1Q96IK5 515 aa18.55■□□□□ 0.56
CTSB-215ENST00000528965 ABHD16BQ9H3Z7 469 aa18.55■□□□□ 0.56
CTSB-215ENST00000528965 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.55■□□□□ 0.56
CTSB-215ENST00000528965 PCDHB15Q9Y5E8 787 aa18.55■□□□□ 0.56
CTSB-215ENST00000528965 MROH7Q68CQ1 1323 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 TRIM43BA6NCK2 446 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 TSPY2A6NKD2 308 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 DCDC2CA8MYV0 355 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 TMEM232C9JQI7 657 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 DUSP11O75319 330 aaKnown RBP18.54■□□□□ 0.56
CTSB-215ENST00000528965 SNAI1O95863 264 aaPredicted RBP18.54■□□□□ 0.56
CTSB-215ENST00000528965 RAG1P15918 1043 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 ACLYP53396 1101 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 ACVR2BQ13705 512 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 SHHQ15465 462 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 PCSK9Q8NBP7 692 aaKnown RBP18.54■□□□□ 0.56
CTSB-215ENST00000528965 TRIM43Q96BQ3 446 aaPredicted RBP18.54■□□□□ 0.56
CTSB-215ENST00000528965 YTHDC1Q96MU7 727 aaKnown RBP18.54■□□□□ 0.56
CTSB-215ENST00000528965 SEC62Q99442 399 aaKnown RBP18.54■□□□□ 0.56
CTSB-215ENST00000528965 ACAD9Q9H845 621 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 STX8Q9UNK0 236 aa18.54■□□□□ 0.56
CTSB-215ENST00000528965 KIAA0355O15063 1070 aa18.53■□□□□ 0.56
CTSB-215ENST00000528965 CST5P28325 142 aaPredicted RBP18.53■□□□□ 0.56
CTSB-215ENST00000528965 TKFCQ3LXA3 575 aa18.53■□□□□ 0.56
CTSB-215ENST00000528965 DNAH12Q6ZR08 3092 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms