RNA–Protein interactions for RNA: ENST00000528932.1

TRIM3-207, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-207ENST00000528932 RIPK3Q9Y572 518 aa15.03■□□□□ -0
TRIM3-207ENST00000528932 NDUFB10O96000 172 aa15.02■□□□□ -0
TRIM3-207ENST00000528932 RAG1P15918 1043 aa15.02■□□□□ -0
TRIM3-207ENST00000528932 RASA1P20936 1047 aa15.02■□□□□ -0
TRIM3-207ENST00000528932 C1orf53Q5VUE5 145 aa15.02■□□□□ -0
TRIM3-207ENST00000528932 MAFAQ8NHW3 353 aaPredicted RBP15.02■□□□□ -0
TRIM3-207ENST00000528932 CHMP4CQ96CF2 233 aa15.02■□□□□ -0
TRIM3-207ENST00000528932 DDX11Q96FC9 970 aa15.02■□□□□ -0
TRIM3-207ENST00000528932 NRBP1Q9UHY1 535 aa15.02■□□□□ -0
TRIM3-207ENST00000528932 DIS3Q9Y2L1 958 aaKnown RBP15.02■□□□□ -0
TRIM3-207ENST00000528932 TACC3Q9Y6A5 838 aa15.02■□□□□ -0
TRIM3-207ENST00000528932 UNC80Q8N2C7 3258 aa15.02□□□□□ -0.01
TRIM3-207ENST00000528932 SYNRGQ9UMZ2 1314 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 MYADML2A6NDP7 307 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 GSG1L2A8MUP6 293 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 F5H6K3 240 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 ADAMTS4O75173 837 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 PRDM1O75626 825 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 SNAI1O95863 264 aaPredicted RBP15.01□□□□□ -0.01
TRIM3-207ENST00000528932 KLRC3Q07444 240 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 OSBP2Q969R2 916 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 KIFC2Q96AC6 838 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 TEX13BQ9BXU2 312 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 RAVER2Q9HCJ3 691 aaKnown RBP15.01□□□□□ -0.01
TRIM3-207ENST00000528932 STARD7Q9NQZ5 370 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 TMEM39AQ9NV64 488 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 CLIP2Q9UDT6 1046 aa15.01□□□□□ -0.01
TRIM3-207ENST00000528932 CTDP1Q9Y5B0 961 aaPredicted RBP15.01□□□□□ -0.01
TRIM3-207ENST00000528932 COPB2P35606 906 aa15□□□□□ -0.01
TRIM3-207ENST00000528932 ACLYP53396 1101 aa15□□□□□ -0.01
TRIM3-207ENST00000528932 SMAD3P84022 425 aaKnown RBP15□□□□□ -0.01
TRIM3-207ENST00000528932 KCNA10Q16322 511 aa15□□□□□ -0.01
TRIM3-207ENST00000528932 SBK1Q52WX2 424 aa15□□□□□ -0.01
TRIM3-207ENST00000528932 LRRC47Q8N1G4 583 aaKnown RBP15□□□□□ -0.01
TRIM3-207ENST00000528932 EPB41L4AQ9HCS5 686 aaPredicted RBP15□□□□□ -0.01
TRIM3-207ENST00000528932 ECHDC1Q9NTX5 307 aa15□□□□□ -0.01
TRIM3-207ENST00000528932 NYAP2Q9P242 653 aa15□□□□□ -0.01
TRIM3-207ENST00000528932 FAM184BQ9ULE4 1060 aa15□□□□□ -0.01
TRIM3-207ENST00000528932 ISY1Q9ULR0 285 aaKnown RBP15□□□□□ -0.01
TRIM3-207ENST00000528932 ROBO3Q96MS0 1386 aa14.99□□□□□ -0.01
TRIM3-207ENST00000528932 M0R2C6 588 aa14.99□□□□□ -0.01
TRIM3-207ENST00000528932 KIAA0355O15063 1070 aa14.99□□□□□ -0.01
TRIM3-207ENST00000528932 APPP05067 770 aa14.99□□□□□ -0.01
TRIM3-207ENST00000528932 FOSL2P15408 326 aa14.99□□□□□ -0.01
TRIM3-207ENST00000528932 TDO2P48775 406 aa14.99□□□□□ -0.01
TRIM3-207ENST00000528932 FPGSQ05932 587 aa14.99□□□□□ -0.01
TRIM3-207ENST00000528932 FAAP100Q0VG06 881 aa14.99□□□□□ -0.01
TRIM3-207ENST00000528932 VTI1AQ96AJ9 217 aa14.99□□□□□ -0.01
TRIM3-207ENST00000528932 EYSQ5T1H1 3165 aa14.98□□□□□ -0.01
TRIM3-207ENST00000528932 DCDC2CA8MYV0 355 aa14.98□□□□□ -0.01
TRIM3-207ENST00000528932 RNF113AO15541 343 aaKnown RBP14.98□□□□□ -0.01
TRIM3-207ENST00000528932 GPAA1O43292 621 aa14.98□□□□□ -0.01
TRIM3-207ENST00000528932 ADCY6O43306 1168 aa14.98□□□□□ -0.01
TRIM3-207ENST00000528932 ZBED4O75132 1171 aa14.98□□□□□ -0.01
TRIM3-207ENST00000528932 C6orf222P0C671 652 aaPredicted RBP14.98□□□□□ -0.01
TRIM3-207ENST00000528932 ZNF444Q8N0Y2 327 aaPredicted RBP14.98□□□□□ -0.01
TRIM3-207ENST00000528932 ANKRD35Q8N283 1001 aa14.98□□□□□ -0.01
TRIM3-207ENST00000528932 KBTBD3Q8NAB2 608 aa14.98□□□□□ -0.01
TRIM3-207ENST00000528932 PRPF38AQ8NAV1 312 aaKnown RBP14.98□□□□□ -0.01
TRIM3-207ENST00000528932 APPBP2Q92624 585 aa14.98□□□□□ -0.01
TRIM3-207ENST00000528932 CEP95Q96GE4 821 aa14.98□□□□□ -0.01
TRIM3-207ENST00000528932 YTHDC1Q96MU7 727 aaKnown RBP14.98□□□□□ -0.01
TRIM3-207ENST00000528932 TSEN34Q9BSV6 310 aaKnown RBP14.98□□□□□ -0.01
TRIM3-207ENST00000528932 HOMER2Q9NSB8 354 aa14.98□□□□□ -0.01
TRIM3-207ENST00000528932 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.98□□□□□ -0.01
TRIM3-207ENST00000528932 SYNGAP1Q96PV0 1343 aa14.97□□□□□ -0.01
TRIM3-207ENST00000528932 DNAJC25-GNG10A0A024R161 153 aa14.97□□□□□ -0.01
TRIM3-207ENST00000528932 ACVR2BQ13705 512 aa14.97□□□□□ -0.01
TRIM3-207ENST00000528932 KLHDC9Q8NEP7 349 aa14.97□□□□□ -0.01
TRIM3-207ENST00000528932 NUP133Q8WUM0 1156 aa14.97□□□□□ -0.01
TRIM3-207ENST00000528932 FGD4Q96M96 766 aa14.97□□□□□ -0.01
TRIM3-207ENST00000528932 IGKV6D-41A0A0C4DH26 115 aa14.96□□□□□ -0.01
TRIM3-207ENST00000528932 ASGR1P07306 291 aa14.96□□□□□ -0.01
TRIM3-207ENST00000528932 CCDC144BQ3MJ40 725 aa14.96□□□□□ -0.01
TRIM3-207ENST00000528932 MAMDC4Q6UXC1 1216 aa14.96□□□□□ -0.01
TRIM3-207ENST00000528932 ARMCX2Q7L311 632 aa14.96□□□□□ -0.01
TRIM3-207ENST00000528932 ANKRD33Q7Z3H0 272 aa14.96□□□□□ -0.01
TRIM3-207ENST00000528932 MSL3Q8N5Y2 521 aaKnown RBP14.96□□□□□ -0.01
TRIM3-207ENST00000528932 GPATCH3Q96I76 525 aa14.96□□□□□ -0.01
TRIM3-207ENST00000528932 SEC62Q99442 399 aaKnown RBP14.96□□□□□ -0.01
TRIM3-207ENST00000528932 SLC38A10Q9HBR0 1119 aa14.96□□□□□ -0.01
TRIM3-207ENST00000528932 MOXD2PA6NHM9 499 aa14.95□□□□□ -0.02
TRIM3-207ENST00000528932 DUSP11O75319 330 aaKnown RBP14.95□□□□□ -0.02
TRIM3-207ENST00000528932 DNAJB2P25686 324 aa14.95□□□□□ -0.02
TRIM3-207ENST00000528932 CNTN2Q02246 1040 aa14.95□□□□□ -0.02
TRIM3-207ENST00000528932 GRIN2CQ14957 1233 aa14.95□□□□□ -0.02
TRIM3-207ENST00000528932 SLFN13Q68D06 897 aa14.95□□□□□ -0.02
TRIM3-207ENST00000528932 CCSAPQ6IQ19 270 aaPredicted RBP14.95□□□□□ -0.02
TRIM3-207ENST00000528932 GIMAP6Q6P9H5 292 aa14.95□□□□□ -0.02
TRIM3-207ENST00000528932 GLT1D1Q96MS3 346 aa14.95□□□□□ -0.02
TRIM3-207ENST00000528932 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRIM3-207ENST00000528932 PPP1R12CQ9BZL4 782 aa14.95□□□□□ -0.02
TRIM3-207ENST00000528932 MTMR4Q9NYA4 1195 aa14.95□□□□□ -0.02
TRIM3-207ENST00000528932 FEM1BQ9UK73 627 aa14.95□□□□□ -0.02
TRIM3-207ENST00000528932 DDX49Q9Y6V7 483 aaKnown RBP14.95□□□□□ -0.02
TRIM3-207ENST00000528932 MYO9BQ13459 2157 aa14.94□□□□□ -0.02
TRIM3-207ENST00000528932 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.94□□□□□ -0.02
TRIM3-207ENST00000528932 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.94□□□□□ -0.02
TRIM3-207ENST00000528932 GRXCR1A8MXD5 290 aa14.94□□□□□ -0.02
TRIM3-207ENST00000528932 TMEM232C9JQI7 657 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms