RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 NOC3LQ8WTT2 800 aaKnown RBP9.45□□□□□ -0.9
CSTF3-208ENST00000528865 CPLX3Q8WVH0 158 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 NLRP3Q96P20 1036 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 FUT8Q9BYC5 575 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 IRX2Q9BZI1 471 aaPredicted RBP9.45□□□□□ -0.9
CSTF3-208ENST00000528865 CUEDC2Q9H467 287 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 THAP9Q9H5L6 903 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 ARFGAP3Q9NP61 516 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 IL17RBQ9NRM6 502 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 ABHD10Q9NUJ1 306 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 KBTBD4Q9NVX7 518 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.45□□□□□ -0.9
CSTF3-208ENST00000528865 PCDHA6Q9UN73 950 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 PCDHA8Q9Y5H6 950 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 ROBO3Q96MS0 1386 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 NRAPQ86VF7 1730 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 KAT6BQ8WYB5 2073 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 KDM4FA0A1W2PPD8 638 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 RPS6KA4O75676 772 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 RHOBTB3O94955 611 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 SEC31AO94979 1220 aaKnown RBP9.44□□□□□ -0.9
CSTF3-208ENST00000528865 PARP1P09874 1014 aaKnown RBP9.44□□□□□ -0.9
CSTF3-208ENST00000528865 KLRK1P26718 216 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 MCM7P33993 719 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 PRCPP42785 496 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 CHMP4BP1P59074 171 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 TFAP4Q01664 338 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 WHAMMP3Q1A5X7 153 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 SLC35G1Q2M3R5 365 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 COBLL1Q53SF7 1204 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 TEX35Q5T0J7 233 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 TBC1D9BQ66K14 1250 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 DTHD1Q6ZMT9 781 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 C15orf52Q6ZUT6 534 aaKnown RBP9.44□□□□□ -0.9
CSTF3-208ENST00000528865 MB21D1Q8N884 522 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 GIMAP8Q8ND71 665 aaPredicted RBP9.44□□□□□ -0.9
CSTF3-208ENST00000528865 CCDC148Q8NFR7 591 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 STAMQ92783 540 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 DHTKD1Q96HY7 919 aaPredicted RBP9.44□□□□□ -0.9
CSTF3-208ENST00000528865 AK8Q96MA6 479 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 EPC1Q9H2F5 836 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 KAT14Q9H8E8 782 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 MAGEF1Q9HAY2 307 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 LZTFL1Q9NQ48 299 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 ST7Q9NRC1 585 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 DISC1Q9NRI5 854 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 MAD2L2Q9UI95 211 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 CAPN11Q9UMQ6 739 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 EPN1Q9Y6I3 576 aaPredicted RBP9.44□□□□□ -0.9
CSTF3-208ENST00000528865 FAM205AQ6ZU69 1335 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 ROBO1Q9Y6N7 1651 aa9.44□□□□□ -0.9
CSTF3-208ENST00000528865 COL5A3P25940 1745 aaPredicted RBP9.44□□□□□ -0.9
CSTF3-208ENST00000528865 BAZ2AQ9UIF9 1905 aaKnown RBP9.43□□□□□ -0.9
CSTF3-208ENST00000528865 A0A0U1RQJ8 604 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 CCDC66A2RUB6 948 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 CTAGE9A4FU28 777 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 TSPY2A6NKD2 308 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 LGALS16A8MUM7 142 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 PRDX5P30044 214 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 HOXA7P31268 230 aaPredicted RBP9.43□□□□□ -0.9
CSTF3-208ENST00000528865 KRT9P35527 623 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 PPP1R2P41236 205 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 STAT6P42226 847 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 NOVP48745 357 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 PIP4K2BP78356 416 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 AMPD2Q01433 879 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 ORC2Q13416 577 aaPredicted RBP9.43□□□□□ -0.9
CSTF3-208ENST00000528865 SMC1AQ14683 1233 aaKnown RBP9.43□□□□□ -0.9
CSTF3-208ENST00000528865 LONRF2Q1L5Z9 754 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 KIF4BQ2VIQ3 1234 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 ZNF569Q5MCW4 686 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 BEND6Q5SZJ8 279 aaPredicted RBP9.43□□□□□ -0.9
CSTF3-208ENST00000528865 TYW1BQ6NUM6 668 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 SLC35F6Q8N357 371 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 OR8K1Q8NGG5 319 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 WDR66Q8TBY9 1149 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 ATRIPQ8WXE1 791 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 DNAJC7Q99615 494 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 NAPGQ99747 312 aaPredicted RBP9.43□□□□□ -0.9
CSTF3-208ENST00000528865 C7orf25Q9BPX7 421 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 NUP58Q9BVL2 599 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 VPS16Q9H269 839 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 TMEM60Q9H2L4 133 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 ANKZF1Q9H8Y5 726 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 MCM9Q9NXL9 1143 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 PSD3Q9NYI0 1048 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 TAB2Q9NYJ8 693 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 TFCP2L1Q9NZI6 479 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 GDAQ9Y2T3 454 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 LEMD3Q9Y2U8 911 aa9.43□□□□□ -0.9
CSTF3-208ENST00000528865 REXO2Q9Y3B8 237 aaKnown RBP9.43□□□□□ -0.9
CSTF3-208ENST00000528865 KIAA1551Q9HCM1 1747 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 STXBP3O00186 592 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 PSMD14O00487 310 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 KCNQ2O43526 872 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 CYTH3O43739 400 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 USP17L8P0C7I0 530 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 SRGNP10124 158 aa9.42□□□□□ -0.9
CSTF3-208ENST00000528865 CCT6AP40227 531 aaKnown RBP9.42□□□□□ -0.9
CSTF3-208ENST00000528865 DNM2P50570 870 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms