RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 TOB2Q14106 344 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 TRIM29Q14134 588 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 KIF22Q14807 665 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 TAF1CQ15572 869 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 SYDE2Q5VT97 1194 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 CYP4F22Q6NT55 531 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 IFNL1Q8IU54 200 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 SIAH1Q8IUQ4 282 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 SPICE1Q8N0Z3 855 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 CCDC148Q8NFR7 591 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 INTS4Q96HW7 963 aaKnown RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 MPHOSPH6Q99547 160 aaKnown RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 KIF2CQ99661 725 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 CFHR5Q9BXR6 569 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 RNF26Q9BY78 433 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 MAP3K20Q9NYL2 800 aaKnown RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 PPP1R9AQ9ULJ8 1098 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 FZD1Q9UP38 647 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 RABGAP1Q9Y3P9 1069 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 TACC3Q9Y6A5 838 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 TAF6LQ9Y6J9 622 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 SMIM22K7EJ46 135 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 ATP2A1O14983 1001 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 DEXIO95424 95 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 GNRH1P01148 92 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 IFNAR1P17181 557 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 DSG3P32926 999 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 NOM1Q5C9Z4 860 aaKnown RBP9.18□□□□□ -0.94
SSBP3-211ENST00000528787 FAM83BQ5T0W9 1011 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 TMTC3Q6ZXV5 915 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 MCF2L2Q86YR7 1114 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 FAM184AQ8NB25 1140 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 GPRC5AQ8NFJ5 357 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 BICD2Q8TD16 824 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 GTF3C6Q969F1 213 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 TCEANC2Q96MN5 208 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 AMNQ9BXJ7 453 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 LRRC2Q9BYS8 371 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 THSD7BQ9C0I4 1608 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 CWC22Q9HCG8 908 aaKnown RBP9.18□□□□□ -0.94
SSBP3-211ENST00000528787 STK36Q9NRP7 1315 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 SLC5A4Q9NY91 659 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 MTMR7Q9Y216 660 aa9.18□□□□□ -0.94
SSBP3-211ENST00000528787 ABCB11O95342 1321 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 PNMA6FA0A0J9YX94 578 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 BTBD19C9JJ37 291 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 ZBTB5O15062 677 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 CPA1P15085 419 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 VEGFBP49765 207 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 HERVK_113P62684 666 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 JAG1P78504 1218 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 FAM110CQ1W6H9 321 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 GALNT17Q6IS24 598 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 PPP1R18Q6NYC8 613 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 KCTD1Q719H9 257 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 SHCBP1Q8NEM2 672 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 BRI3BPQ8WY22 251 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 TEX13BQ9BXU2 312 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 ASCC2Q9H1I8 757 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-211ENST00000528787 MROH8Q9H579 483 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 RIOX1Q9H6W3 641 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 EHMT1Q9H9B1 1298 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 BRMS1Q9HCU9 246 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 SH3GLB2Q9NR46 395 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 MAD2L2Q9UI95 211 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 ADAMTS5Q9UNA0 930 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 MRPL11Q9Y3B7 192 aaKnown RBP9.17□□□□□ -0.94
SSBP3-211ENST00000528787 IVNS1ABPQ9Y6Y0 642 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 PARP14Q460N5 1801 aa9.17□□□□□ -0.94
SSBP3-211ENST00000528787 FRMPD2Q68DX3 1309 aaPredicted RBP9.16□□□□□ -0.94
SSBP3-211ENST00000528787 VWA5AO00534 786 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 PRPF3O43395 683 aaKnown RBP9.16□□□□□ -0.94
SSBP3-211ENST00000528787 STRNO43815 780 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 TLR2O60603 784 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 ICAM1P05362 532 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 SLURP2P0DP57 97 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 CALML3P27482 149 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 HOXD10P28358 340 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 GNA11P29992 359 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 MAPK4P31152 587 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 GJA5P36382 358 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 MKRN3Q13064 507 aaKnown RBP9.16□□□□□ -0.94
SSBP3-211ENST00000528787 SAFBQ15424 915 aaKnown RBP eCLIP9.16□□□□□ -0.94
SSBP3-211ENST00000528787 FBXO11Q86XK2 927 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 CLEC10AQ8IUN9 316 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 ADGRF4Q8IZF3 695 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 CHST13Q8NET6 341 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 CNKSR2Q8WXI2 1034 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 CUL5Q93034 780 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 RANBP17Q9H2T7 1088 aaKnown RBP9.16□□□□□ -0.94
SSBP3-211ENST00000528787 SLC38A10Q9HBR0 1119 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 GPCPD1Q9NPB8 672 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 BRPF3Q9ULD4 1205 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 PRR12Q9ULL5 1215 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 TPCN1Q9ULQ1 816 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 SMC3Q9UQE7 1217 aa9.16□□□□□ -0.94
SSBP3-211ENST00000528787 PFASO15067 1338 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 LOC102724159A0A0B4J2E5 919 aa9.15□□□□□ -0.94
SSBP3-211ENST00000528787 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms