RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 CNGA1P29973 690 aa28.4■■■□□ 2.14
PACSIN3-204ENST00000528201 PRAMEF19Q5SWL8 479 aa28.4■■■□□ 2.14
PACSIN3-204ENST00000528201 RASGRP2Q7LDG7 609 aa28.4■■■□□ 2.14
PACSIN3-204ENST00000528201 TEX13BQ9BXU2 312 aa28.4■■■□□ 2.14
PACSIN3-204ENST00000528201 ORC4O43929 436 aa28.39■■■□□ 2.14
PACSIN3-204ENST00000528201 SNRNP48Q6IEG0 339 aaKnown RBP28.39■■■□□ 2.14
PACSIN3-204ENST00000528201 SLC38A10Q9HBR0 1119 aa28.39■■■□□ 2.14
PACSIN3-204ENST00000528201 FEM1BQ9UK73 627 aa28.39■■■□□ 2.14
PACSIN3-204ENST00000528201 TRIOBPQ9H2D6 2365 aa28.38■■■□□ 2.13
PACSIN3-204ENST00000528201 RANBP6O60518 1105 aaKnown RBP28.38■■■□□ 2.13
PACSIN3-204ENST00000528201 BMP3P12645 472 aa28.38■■■□□ 2.13
PACSIN3-204ENST00000528201 PDE4AP27815 886 aa28.38■■■□□ 2.13
PACSIN3-204ENST00000528201 NOVP48745 357 aa28.38■■■□□ 2.13
PACSIN3-204ENST00000528201 ZNF792Q3KQV3 632 aa28.38■■■□□ 2.13
PACSIN3-204ENST00000528201 PRO3102Q9H379 93 aa28.38■■■□□ 2.13
PACSIN3-204ENST00000528201 RAVER2Q9HCJ3 691 aaKnown RBP28.38■■■□□ 2.13
PACSIN3-204ENST00000528201 COL11A1P12107 1806 aaPredicted RBP28.38■■■□□ 2.13
PACSIN3-204ENST00000528201 ATP2A1O14983 1001 aa28.37■■■□□ 2.13
PACSIN3-204ENST00000528201 HAND2P61296 217 aa28.37■■■□□ 2.13
PACSIN3-204ENST00000528201 CPXCR1Q8N123 301 aa28.37■■■□□ 2.13
PACSIN3-204ENST00000528201 GMCL1Q96IK5 515 aa28.37■■■□□ 2.13
PACSIN3-204ENST00000528201 SLC5A4Q9NY91 659 aa28.37■■■□□ 2.13
PACSIN3-204ENST00000528201 STX8Q9UNK0 236 aa28.37■■■□□ 2.13
PACSIN3-204ENST00000528201 ZMYM6O95789 1325 aa28.37■■■□□ 2.13
PACSIN3-204ENST00000528201 MCCP23508 829 aa28.36■■■□□ 2.13
PACSIN3-204ENST00000528201 COPB2P35606 906 aa28.36■■■□□ 2.13
PACSIN3-204ENST00000528201 KCTD2Q14681 263 aa28.36■■■□□ 2.13
PACSIN3-204ENST00000528201 ANO1Q5XXA6 986 aa28.36■■■□□ 2.13
PACSIN3-204ENST00000528201 TBC1D10CQ8IV04 446 aa28.36■■■□□ 2.13
PACSIN3-204ENST00000528201 C7orf61Q8IZ16 206 aa28.36■■■□□ 2.13
PACSIN3-204ENST00000528201 PCDH10Q9P2E7 1040 aa28.36■■■□□ 2.13
PACSIN3-204ENST00000528201 RBM27Q9P2N5 1060 aaKnown RBP28.36■■■□□ 2.13
PACSIN3-204ENST00000528201 TMEM232C9JQI7 657 aa28.35■■■□□ 2.13
PACSIN3-204ENST00000528201 ZBED4O75132 1171 aa28.35■■■□□ 2.13
PACSIN3-204ENST00000528201 ALPK3Q96L96 1907 aa28.35■■■□□ 2.13
PACSIN3-204ENST00000528201 MYH4Q9Y623 1939 aa28.34■■■□□ 2.13
PACSIN3-204ENST00000528201 SLC4A3P48751 1232 aa28.34■■■□□ 2.13
PACSIN3-204ENST00000528201 FXR1P51114 621 aaKnown RBP eCLIP28.34■■■□□ 2.13
PACSIN3-204ENST00000528201 RRP12Q5JTH9 1297 aaKnown RBP28.34■■■□□ 2.13
PACSIN3-204ENST00000528201 CWC27Q6UX04 472 aaKnown RBP28.34■■■□□ 2.13
PACSIN3-204ENST00000528201 SEPT4O43236 478 aa28.33■■■□□ 2.13
PACSIN3-204ENST00000528201 MSCO60682 206 aa28.33■■■□□ 2.13
PACSIN3-204ENST00000528201 TAL1P17542 331 aaPredicted RBP28.33■■■□□ 2.13
PACSIN3-204ENST00000528201 SLC1A4P43007 532 aa28.33■■■□□ 2.13
PACSIN3-204ENST00000528201 LRRC26Q2I0M4 334 aa28.33■■■□□ 2.13
PACSIN3-204ENST00000528201 KCTD1Q719H9 257 aa28.33■■■□□ 2.13
PACSIN3-204ENST00000528201 TOMM22Q9NS69 142 aa28.33■■■□□ 2.13
PACSIN3-204ENST00000528201 ISY1Q9ULR0 285 aaKnown RBP28.33■■■□□ 2.13
PACSIN3-204ENST00000528201 ZMYND8Q9ULU4 1186 aaPredicted RBP28.33■■■□□ 2.13
PACSIN3-204ENST00000528201 DIS3Q9Y2L1 958 aaKnown RBP28.33■■■□□ 2.13
PACSIN3-204ENST00000528201 DNAJC25-GNG10A0A024R161 153 aa28.32■■■□□ 2.12
PACSIN3-204ENST00000528201 STAG1Q8WVM7 1258 aa28.32■■■□□ 2.12
PACSIN3-204ENST00000528201 TINF2Q9BSI4 451 aa28.32■■■□□ 2.12
PACSIN3-204ENST00000528201 IL25Q9H293 177 aa28.32■■■□□ 2.12
PACSIN3-204ENST00000528201 STAT2P52630 851 aa28.31■■■□□ 2.12
PACSIN3-204ENST00000528201 PPP4R3BQ5MIZ7 849 aa28.31■■■□□ 2.12
PACSIN3-204ENST00000528201 DIAPH3Q9NSV4 1193 aa28.31■■■□□ 2.12
PACSIN3-204ENST00000528201 MTMR7Q9Y216 660 aa28.31■■■□□ 2.12
PACSIN3-204ENST00000528201 ZNF536O15090 1300 aa28.31■■■□□ 2.12
PACSIN3-204ENST00000528201 GSPT1P15170 499 aaKnown RBP28.3■■■□□ 2.12
PACSIN3-204ENST00000528201 OAZ1P54368 228 aa28.3■■■□□ 2.12
PACSIN3-204ENST00000528201 SNAP25P60880 206 aa28.3■■■□□ 2.12
PACSIN3-204ENST00000528201 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.3■■■□□ 2.12
PACSIN3-204ENST00000528201 CTDP1Q9Y5B0 961 aaPredicted RBP28.3■■■□□ 2.12
PACSIN3-204ENST00000528201 DNAH12Q6ZR08 3092 aa28.3■■■□□ 2.12
PACSIN3-204ENST00000528201 NEDD4P46934 1319 aa28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 DNM1LO00429 736 aa28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 AKNAD1Q5T1N1 836 aa28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 GJC2Q5T442 439 aaPredicted RBP28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 RCSD1Q6JBY9 416 aa28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 FAM160B2Q86V87 743 aa28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 FGD4Q96M96 766 aa28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 AGBL1Q96MI9 1066 aa28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 TMEM47Q9BQJ4 181 aa28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 SENP6Q9GZR1 1112 aaPredicted RBP28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 TCP11L1Q9NUJ3 509 aa28.29■■■□□ 2.12
PACSIN3-204ENST00000528201 FRMPD3Q5JV73 1810 aa28.28■■■□□ 2.12
PACSIN3-204ENST00000528201 LAMA3Q16787 3333 aa28.28■■■□□ 2.12
PACSIN3-204ENST00000528201 PLA2G6O60733 806 aa28.28■■■□□ 2.12
PACSIN3-204ENST00000528201 SYN1P17600 705 aa28.28■■■□□ 2.12
PACSIN3-204ENST00000528201 MFAP1P55081 439 aaKnown RBP28.28■■■□□ 2.12
PACSIN3-204ENST00000528201 IKQ13123 557 aaPredicted RBP28.28■■■□□ 2.12
PACSIN3-204ENST00000528201 CHURC1Q8WUH1 139 aa28.28■■■□□ 2.12
PACSIN3-204ENST00000528201 HOMER2Q9NSB8 354 aa28.28■■■□□ 2.12
PACSIN3-204ENST00000528201 ZNF865P0CJ78 1059 aaPredicted RBP28.27■■■□□ 2.12
PACSIN3-204ENST00000528201 TTBK2Q6IQ55 1244 aa28.27■■■□□ 2.12
PACSIN3-204ENST00000528201 DDX11Q96FC9 970 aa28.27■■■□□ 2.12
PACSIN3-204ENST00000528201 NRBP1Q9UHY1 535 aa28.27■■■□□ 2.12
PACSIN3-204ENST00000528201 PRR12Q9ULL5 1215 aa28.27■■■□□ 2.12
PACSIN3-204ENST00000528201 SZT2Q5T011 3432 aa28.26■■■□□ 2.11
PACSIN3-204ENST00000528201 SNAI1O95863 264 aaPredicted RBP28.26■■■□□ 2.11
PACSIN3-204ENST00000528201 TOP1P11387 765 aaKnown RBP28.26■■■□□ 2.11
PACSIN3-204ENST00000528201 TTC22Q5TAA0 569 aa28.26■■■□□ 2.11
PACSIN3-204ENST00000528201 MFSD6Q6ZSS7 791 aa28.26■■■□□ 2.11
PACSIN3-204ENST00000528201 CHST13Q8NET6 341 aa28.26■■■□□ 2.11
PACSIN3-204ENST00000528201 LENG1Q96BZ8 264 aaPredicted RBP28.26■■■□□ 2.11
PACSIN3-204ENST00000528201 HIP1O00291 1037 aa28.25■■■□□ 2.11
PACSIN3-204ENST00000528201 FDX1P10109 184 aa28.25■■■□□ 2.11
PACSIN3-204ENST00000528201 ATN1P54259 1190 aaPredicted RBP28.25■■■□□ 2.11
PACSIN3-204ENST00000528201 CCDC96Q2M329 555 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms