RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 SEPT4O43236 478 aa27.4■■□□□ 1.98
PKP3-206ENST00000528036 PLA2G6O60733 806 aa27.4■■□□□ 1.98
PKP3-206ENST00000528036 IGHDP01880 384 aa27.4■■□□□ 1.98
PKP3-206ENST00000528036 COL6A1P12109 1028 aa27.4■■□□□ 1.98
PKP3-206ENST00000528036 A0A1W2PPC1 479 aa27.39■■□□□ 1.98
PKP3-206ENST00000528036 FGAP02671 866 aa27.39■■□□□ 1.98
PKP3-206ENST00000528036 HSPD1P10809 573 aaKnown RBP27.39■■□□□ 1.98
PKP3-206ENST00000528036 SNRNP48Q6IEG0 339 aaKnown RBP27.39■■□□□ 1.98
PKP3-206ENST00000528036 CHRDL2Q6WN34 429 aa27.39■■□□□ 1.98
PKP3-206ENST00000528036 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.39■■□□□ 1.987e-7■■■■□ 23
PKP3-206ENST00000528036 FAM227BQ96M60 508 aa27.39■■□□□ 1.98
PKP3-206ENST00000528036 SLC38A10Q9HBR0 1119 aa27.39■■□□□ 1.98
PKP3-206ENST00000528036 STX8Q9UNK0 236 aa27.39■■□□□ 1.98
PKP3-206ENST00000528036 CCDC171Q6TFL3 1326 aa27.39■■□□□ 1.97
PKP3-206ENST00000528036 A0A0D9SFI3 127 aa27.38■■□□□ 1.97
PKP3-206ENST00000528036 RANBP6O60518 1105 aaKnown RBP27.38■■□□□ 1.97
PKP3-206ENST00000528036 SLC1A4P43007 532 aa27.38■■□□□ 1.97
PKP3-206ENST00000528036 STAT2P52630 851 aa27.38■■□□□ 1.97
PKP3-206ENST00000528036 VPS53Q5VIR6 699 aa27.38■■□□□ 1.97
PKP3-206ENST00000528036 LRRC47Q8N1G4 583 aaKnown RBP27.38■■□□□ 1.97
PKP3-206ENST00000528036 CHST13Q8NET6 341 aa27.38■■□□□ 1.97
PKP3-206ENST00000528036 KIFC2Q96AC6 838 aa27.38■■□□□ 1.97
PKP3-206ENST00000528036 PCDH10Q9P2E7 1040 aa27.38■■□□□ 1.97
PKP3-206ENST00000528036 SUPT16HQ9Y5B9 1047 aaKnown RBP27.38■■□□□ 1.97
PKP3-206ENST00000528036 DNM1LO00429 736 aa27.37■■□□□ 1.97
PKP3-206ENST00000528036 SDSP20132 328 aa27.37■■□□□ 1.97
PKP3-206ENST00000528036 CTDSPL2Q05D32 466 aa27.37■■□□□ 1.97
PKP3-206ENST00000528036 NMIQ13287 307 aaPredicted RBP27.37■■□□□ 1.97
PKP3-206ENST00000528036 ZNF792Q3KQV3 632 aa27.37■■□□□ 1.97
PKP3-206ENST00000528036 STAG1Q8WVM7 1258 aa27.37■■□□□ 1.97
PKP3-206ENST00000528036 DDX11Q96FC9 970 aa27.37■■□□□ 1.97
PKP3-206ENST00000528036 NOVP48745 357 aa27.36■■□□□ 1.97
PKP3-206ENST00000528036 TINF2Q9BSI4 451 aa27.36■■□□□ 1.97
PKP3-206ENST00000528036 RNF41Q9H4P4 317 aaPredicted RBP27.36■■□□□ 1.97
PKP3-206ENST00000528036 TCP11L1Q9NUJ3 509 aa27.36■■□□□ 1.97
PKP3-206ENST00000528036 RCSD1Q6JBY9 416 aa27.35■■□□□ 1.97
PKP3-206ENST00000528036 TRPV1Q8NER1 839 aa27.35■■□□□ 1.97
PKP3-206ENST00000528036 DIAPH3Q9NSV4 1193 aa27.35■■□□□ 1.97
PKP3-206ENST00000528036 PFASO15067 1338 aa27.35■■□□□ 1.97
PKP3-206ENST00000528036 PARP14Q460N5 1801 aa27.34■■□□□ 1.97
PKP3-206ENST00000528036 TMEM232C9JQI7 657 aa27.34■■□□□ 1.97
PKP3-206ENST00000528036 IKQ13123 557 aaPredicted RBP27.34■■□□□ 1.97
PKP3-206ENST00000528036 TKFCQ3LXA3 575 aa27.34■■□□□ 1.97
PKP3-206ENST00000528036 ZNF467Q7Z7K2 595 aaPredicted RBP27.34■■□□□ 1.97
PKP3-206ENST00000528036 C7orf61Q8IZ16 206 aa27.34■■□□□ 1.97
PKP3-206ENST00000528036 CPXCR1Q8N123 301 aa27.34■■□□□ 1.97
PKP3-206ENST00000528036 IL17RBQ9NRM6 502 aa27.34■■□□□ 1.97
PKP3-206ENST00000528036 TOMM22Q9NS69 142 aa27.34■■□□□ 1.97
PKP3-206ENST00000528036 ISY1Q9ULR0 285 aaKnown RBP27.34■■□□□ 1.97
PKP3-206ENST00000528036 CNPY2Q9Y2B0 182 aa27.34■■□□□ 1.97
PKP3-206ENST00000528036 KBTBD13C9JR72 458 aa27.33■■□□□ 1.97
PKP3-206ENST00000528036 TTC14Q96N46 770 aa27.33■■□□□ 1.97
PKP3-206ENST00000528036 PRO3102Q9H379 93 aa27.33■■□□□ 1.97
PKP3-206ENST00000528036 PGK2P07205 417 aa27.32■■□□□ 1.96
PKP3-206ENST00000528036 MCCP23508 829 aa27.32■■□□□ 1.96
PKP3-206ENST00000528036 MFSD6Q6ZSS7 791 aa27.32■■□□□ 1.96
PKP3-206ENST00000528036 ZNF589Q86UQ0 364 aaPredicted RBP27.32■■□□□ 1.96
PKP3-206ENST00000528036 DCAF4Q8WV16 495 aa27.32■■□□□ 1.96
PKP3-206ENST00000528036 RBM27Q9P2N5 1060 aaKnown RBP27.32■■□□□ 1.96
PKP3-206ENST00000528036 SYNGAP1Q96PV0 1343 aa27.32■■□□□ 1.96
PKP3-206ENST00000528036 TOP1P11387 765 aaKnown RBP27.31■■□□□ 1.96
PKP3-206ENST00000528036 BMP8BP34820 402 aa27.31■■□□□ 1.96
PKP3-206ENST00000528036 FXR1P51114 621 aaKnown RBP eCLIP27.31■■□□□ 1.96
PKP3-206ENST00000528036 AKNAD1Q5T1N1 836 aa27.31■■□□□ 1.96
PKP3-206ENST00000528036 MAMDC4Q6UXC1 1216 aa27.31■■□□□ 1.96
PKP3-206ENST00000528036 ANKRD35Q8N283 1001 aa27.31■■□□□ 1.96
PKP3-206ENST00000528036 RAVER2Q9HCJ3 691 aaKnown RBP27.31■■□□□ 1.96
PKP3-206ENST00000528036 PNMA2Q9UL42 364 aa27.31■■□□□ 1.96
PKP3-206ENST00000528036 MYH4Q9Y623 1939 aa27.3■■□□□ 1.96
PKP3-206ENST00000528036 DNAJC25-GNG10A0A024R161 153 aa27.3■■□□□ 1.96
PKP3-206ENST00000528036 RARBP10826 455 aa27.3■■□□□ 1.96
PKP3-206ENST00000528036 CCDC178Q5BJE1 867 aa27.3■■□□□ 1.96
PKP3-206ENST00000528036 SENP6Q9GZR1 1112 aaPredicted RBP27.3■■□□□ 1.96
PKP3-206ENST00000528036 RIPK3Q9Y572 518 aa27.3■■□□□ 1.96
PKP3-206ENST00000528036 ZNF213O14771 459 aa27.29■■□□□ 1.96
PKP3-206ENST00000528036 AKR1A1P14550 325 aa27.29■■□□□ 1.96
PKP3-206ENST00000528036 RRP12Q5JTH9 1297 aaKnown RBP27.29■■□□□ 1.96
PKP3-206ENST00000528036 ESR2Q92731 530 aa27.29■■□□□ 1.96
PKP3-206ENST00000528036 ACAD9Q9H845 621 aa27.29■■□□□ 1.96
PKP3-206ENST00000528036 INCENPQ9NQS7 918 aa27.29■■□□□ 1.96
PKP3-206ENST00000528036 CTNNA3Q9UI47 895 aa27.29■■□□□ 1.96
PKP3-206ENST00000528036 PRAMEF19Q5SWL8 479 aa27.28■■□□□ 1.96
PKP3-206ENST00000528036 SLC4A3P48751 1232 aa27.27■■□□□ 1.96
PKP3-206ENST00000528036 CWC27Q6UX04 472 aaKnown RBP27.27■■□□□ 1.96
PKP3-206ENST00000528036 RNF180Q86T96 592 aa27.27■■□□□ 1.96
PKP3-206ENST00000528036 GDF15Q99988 308 aa27.27■■□□□ 1.96
PKP3-206ENST00000528036 DSCC1Q9BVC3 393 aa27.27■■□□□ 1.96
PKP3-206ENST00000528036 COL11A1P12107 1806 aaPredicted RBP27.27■■□□□ 1.96
PKP3-206ENST00000528036 NMT2O60551 498 aa27.26■■□□□ 1.95
PKP3-206ENST00000528036 LRRC26Q2I0M4 334 aa27.26■■□□□ 1.95
PKP3-206ENST00000528036 XPNPEP3Q9NQH7 507 aa27.26■■□□□ 1.95
PKP3-206ENST00000528036 FAM184BQ9ULE4 1060 aa27.26■■□□□ 1.95
PKP3-206ENST00000528036 CCDC96Q2M329 555 aa27.25■■□□□ 1.95
PKP3-206ENST00000528036 GJC2Q5T442 439 aaPredicted RBP27.25■■□□□ 1.95
PKP3-206ENST00000528036 BTNL9Q6UXG8 535 aa27.25■■□□□ 1.95
PKP3-206ENST00000528036 KCTD1Q719H9 257 aa27.25■■□□□ 1.95
PKP3-206ENST00000528036 TMEM47Q9BQJ4 181 aa27.25■■□□□ 1.95
PKP3-206ENST00000528036 PRR12Q9ULL5 1215 aa27.25■■□□□ 1.95
PKP3-206ENST00000528036 ZMYND8Q9ULU4 1186 aaPredicted RBP27.25■■□□□ 1.95
PKP3-206ENST00000528036 TACC3Q9Y6A5 838 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms