RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 SAMD1Q6SPF0 538 aaPredicted RBP24.88■■□□□ 1.57
PKP3-205ENST00000527442 SPTBN5Q9NRC6 3674 aaKnown RBP24.87■■□□□ 1.57
PKP3-205ENST00000527442 AKR1B1P15121 316 aa24.87■■□□□ 1.57
PKP3-205ENST00000527442 ITGB8P26012 769 aa24.87■■□□□ 1.57
PKP3-205ENST00000527442 SLFNL1Q499Z3 407 aa24.87■■□□□ 1.57
PKP3-205ENST00000527442 OSBP2Q969R2 916 aa24.87■■□□□ 1.57
PKP3-205ENST00000527442 PHF24Q9UPV7 400 aa24.87■■□□□ 1.57
PKP3-205ENST00000527442 TMX2Q9Y320 296 aa24.87■■□□□ 1.57
PKP3-205ENST00000527442 REC8O95072 547 aa24.86■■□□□ 1.57
PKP3-205ENST00000527442 FCER1AP12319 257 aa24.86■■□□□ 1.57
PKP3-205ENST00000527442 ICA1Q05084 483 aa24.86■■□□□ 1.57
PKP3-205ENST00000527442 TMEM132BQ14DG7 1078 aa24.86■■□□□ 1.57
PKP3-205ENST00000527442 SEC62Q99442 399 aaKnown RBP24.86■■□□□ 1.57
PKP3-205ENST00000527442 VCPKMTQ9H867 229 aa24.86■■□□□ 1.57
PKP3-205ENST00000527442 ARHGEF10LQ9HCE6 1279 aa24.86■■□□□ 1.57
PKP3-205ENST00000527442 XPNPEP3Q9NQH7 507 aa24.86■■□□□ 1.57
PKP3-205ENST00000527442 SWAP70Q9UH65 585 aa24.86■■□□□ 1.57
PKP3-205ENST00000527442 CCDC171Q6TFL3 1326 aa24.86■■□□□ 1.57
PKP3-205ENST00000527442 M0R2C6 588 aa24.85■■□□□ 1.57
PKP3-205ENST00000527442 EPB41L2O43491 1005 aaKnown RBP24.85■■□□□ 1.57
PKP3-205ENST00000527442 SEC24BO95487 1268 aa24.85■■□□□ 1.57
PKP3-205ENST00000527442 EPHB4P54760 987 aa24.85■■□□□ 1.57
PKP3-205ENST00000527442 ZNF589Q86UQ0 364 aaPredicted RBP24.85■■□□□ 1.57
PKP3-205ENST00000527442 PUS7LQ9H0K6 701 aaKnown RBP24.85■■□□□ 1.57
PKP3-205ENST00000527442 ARMT1Q9H993 441 aa24.85■■□□□ 1.57
PKP3-205ENST00000527442 SMIM22K7EJ46 135 aa24.84■■□□□ 1.57
PKP3-205ENST00000527442 WDR46O15213 610 aaKnown RBP24.84■■□□□ 1.57
PKP3-205ENST00000527442 PGK2P07205 417 aa24.84■■□□□ 1.57
PKP3-205ENST00000527442 MFAP1P55081 439 aaKnown RBP24.84■■□□□ 1.57
PKP3-205ENST00000527442 SH2D4AQ9H788 454 aa24.84■■□□□ 1.57
PKP3-205ENST00000527442 ROBO3Q96MS0 1386 aa24.83■■□□□ 1.57
PKP3-205ENST00000527442 PRKAB2O43741 272 aa24.83■■□□□ 1.57
PKP3-205ENST00000527442 PGK1P00558 417 aa24.83■■□□□ 1.57
PKP3-205ENST00000527442 CLTBP09497 229 aa24.83■■□□□ 1.57
PKP3-205ENST00000527442 RARBP10826 455 aa24.83■■□□□ 1.57
PKP3-205ENST00000527442 FOSL2P15408 326 aa24.83■■□□□ 1.57
PKP3-205ENST00000527442 MMP19Q99542 508 aa24.83■■□□□ 1.57
PKP3-205ENST00000527442 FBXO28Q9NVF7 368 aa24.83■■□□□ 1.57
PKP3-205ENST00000527442 NRBP1Q9UHY1 535 aa24.83■■□□□ 1.57
PKP3-205ENST00000527442 GPAA1O43292 621 aa24.82■■□□□ 1.56
PKP3-205ENST00000527442 SLC25A27O95847 323 aa24.82■■□□□ 1.56
PKP3-205ENST00000527442 TAL1P17542 331 aaPredicted RBP24.82■■□□□ 1.56
PKP3-205ENST00000527442 LENG1Q96BZ8 264 aaPredicted RBP24.82■■□□□ 1.56
PKP3-205ENST00000527442 RNPC3Q96LT9 517 aaKnown RBP24.82■■□□□ 1.56
PKP3-205ENST00000527442 ADAMTS5Q9UNA0 930 aa24.82■■□□□ 1.56
PKP3-205ENST00000527442 TACC3Q9Y6A5 838 aa24.82■■□□□ 1.56
PKP3-205ENST00000527442 GREB1LQ9C091 1923 aaPredicted RBP24.82■■□□□ 1.56
PKP3-205ENST00000527442 CYP2D7A0A087X1C5 515 aa24.81■■□□□ 1.56
PKP3-205ENST00000527442 CCDC129Q6ZRS4 1044 aa24.81■■□□□ 1.56
PKP3-205ENST00000527442 TINF2Q9BSI4 451 aa24.81■■□□□ 1.56
PKP3-205ENST00000527442 LSG1Q9H089 658 aaKnown RBP24.81■■□□□ 1.56
PKP3-205ENST00000527442 A0A1W2PQ45 241 aaPredicted RBP24.8■■□□□ 1.56
PKP3-205ENST00000527442 A0A1W2PQY0 241 aa24.8■■□□□ 1.56
PKP3-205ENST00000527442 KIAA0355O15063 1070 aa24.8■■□□□ 1.56
PKP3-205ENST00000527442 PQBP1O60828 265 aaKnown RBP24.8■■□□□ 1.56
PKP3-205ENST00000527442 MBD4O95243 580 aa24.8■■□□□ 1.56
PKP3-205ENST00000527442 ZNF792Q3KQV3 632 aa24.8■■□□□ 1.56
PKP3-205ENST00000527442 RNF180Q86T96 592 aa24.8■■□□□ 1.56
PKP3-205ENST00000527442 RIOX2Q8IUF8 465 aa24.8■■□□□ 1.56
PKP3-205ENST00000527442 ANO2Q9NQ90 1003 aa24.8■■□□□ 1.56
PKP3-205ENST00000527442 LAMA4Q16363 1823 aa24.79■■□□□ 1.56
PKP3-205ENST00000527442 ZNF865P0CJ78 1059 aaPredicted RBP24.79■■□□□ 1.56
PKP3-205ENST00000527442 EEF2P13639 858 aaKnown RBP24.79■■□□□ 1.56
PKP3-205ENST00000527442 RAG1P15918 1043 aa24.79■■□□□ 1.56
PKP3-205ENST00000527442 CDK8P49336 464 aa24.79■■□□□ 1.56
PKP3-205ENST00000527442 KIAA1211Q6ZU35 1233 aa24.79■■□□□ 1.56
PKP3-205ENST00000527442 CCDC17Q96LX7 622 aa24.79■■□□□ 1.56
PKP3-205ENST00000527442 ATP8A2Q9NTI2 1148 aa24.79■■□□□ 1.56
PKP3-205ENST00000527442 TMEM265A0A087WTH1 108 aa24.78■■□□□ 1.56
PKP3-205ENST00000527442 ADAMTS4O75173 837 aa24.78■■□□□ 1.56
PKP3-205ENST00000527442 KCTD2Q14681 263 aa24.78■■□□□ 1.56
PKP3-205ENST00000527442 C12orf60Q5U649 245 aa24.78■■□□□ 1.56
PKP3-205ENST00000527442 STRBPQ96SI9 672 aaKnown RBP24.78■■□□□ 1.56
PKP3-205ENST00000527442 DSCC1Q9BVC3 393 aa24.78■■□□□ 1.56
PKP3-205ENST00000527442 UPF2Q9HAU5 1272 aaKnown RBP24.78■■□□□ 1.56
PKP3-205ENST00000527442 ZNF214Q9UL59 606 aaPredicted RBP24.78■■□□□ 1.56
PKP3-205ENST00000527442 DIS3Q9Y2L1 958 aaKnown RBP24.78■■□□□ 1.56
PKP3-205ENST00000527442 VWA5AO00534 786 aa24.77■■□□□ 1.56
PKP3-205ENST00000527442 AKR1A1P14550 325 aa24.77■■□□□ 1.56
PKP3-205ENST00000527442 GNAT2P19087 354 aa24.77■■□□□ 1.56
PKP3-205ENST00000527442 FPGSQ05932 587 aa24.77■■□□□ 1.56
PKP3-205ENST00000527442 C16orf86Q6ZW13 317 aa24.77■■□□□ 1.56
PKP3-205ENST00000527442 REPS2Q8NFH8 660 aa24.77■■□□□ 1.56
PKP3-205ENST00000527442 USP26Q9BXU7 913 aa24.77■■□□□ 1.56
PKP3-205ENST00000527442 PPP1R9AQ9ULJ8 1098 aa24.77■■□□□ 1.56
PKP3-205ENST00000527442 USP17L12C9JPN9 530 aa24.76■■□□□ 1.55
PKP3-205ENST00000527442 USP17L21D6R901 530 aa24.76■■□□□ 1.55
PKP3-205ENST00000527442 FOXP2O15409 715 aa24.76■■□□□ 1.55
PKP3-205ENST00000527442 STAT3P40763 770 aa24.76■■□□□ 1.55
PKP3-205ENST00000527442 TMEM39AQ9NV64 488 aa24.76■■□□□ 1.55
PKP3-205ENST00000527442 TTC28Q96AY4 2481 aa24.76■■□□□ 1.55
PKP3-205ENST00000527442 MCM3APO60318 1980 aa24.76■■□□□ 1.55
PKP3-205ENST00000527442 PTH1RQ03431 593 aa24.75■■□□□ 1.55
PKP3-205ENST00000527442 FAAP100Q0VG06 881 aa24.75■■□□□ 1.55
PKP3-205ENST00000527442 FAM83BQ5T0W9 1011 aa24.75■■□□□ 1.55
PKP3-205ENST00000527442 MAP4K1Q92918 833 aa24.75■■□□□ 1.55
PKP3-205ENST00000527442 ZMYM6O95789 1325 aa24.75■■□□□ 1.55
PKP3-205ENST00000527442 SYNRGQ9UMZ2 1314 aa24.75■■□□□ 1.55
PKP3-205ENST00000527442 HSPD1P10809 573 aaKnown RBP24.74■■□□□ 1.55
PKP3-205ENST00000527442 DNAJB2P25686 324 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms