RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 GPATCH4Q5T3I0 446 aaKnown RBP21.68■■□□□ 1.06
SMPD1-203ENST00000527275 TTBK2Q6IQ55 1244 aa21.68■■□□□ 1.06
SMPD1-203ENST00000527275 TRIM22Q8IYM9 498 aa21.68■■□□□ 1.06
SMPD1-203ENST00000527275 DCAF4Q8WV16 495 aa21.68■■□□□ 1.06
SMPD1-203ENST00000527275 C8orf76Q96K31 380 aa21.68■■□□□ 1.06
SMPD1-203ENST00000527275 UBA5Q9GZZ9 404 aa21.68■■□□□ 1.06
SMPD1-203ENST00000527275 KIAA1683Q9H0B3 1180 aa21.68■■□□□ 1.06
SMPD1-203ENST00000527275 ELP3Q9H9T3 547 aa21.68■■□□□ 1.06
SMPD1-203ENST00000527275 V9GY48 417 aaPredicted RBP21.68■■□□□ 1.06
SMPD1-203ENST00000527275 ELP1O95163 1332 aa21.68■■□□□ 1.06
SMPD1-203ENST00000527275 CNTNAP5Q8WYK1 1306 aa21.67■■□□□ 1.06
SMPD1-203ENST00000527275 DGKZQ13574 1117 aa21.67■■□□□ 1.06
SMPD1-203ENST00000527275 LDLRAD1Q5T700 205 aa21.67■■□□□ 1.06
SMPD1-203ENST00000527275 PIBF1Q8WXW3 757 aa21.67■■□□□ 1.06
SMPD1-203ENST00000527275 SPATA32Q96LK8 384 aa21.67■■□□□ 1.06
SMPD1-203ENST00000527275 RNF26Q9BY78 433 aaPredicted RBP21.67■■□□□ 1.06
SMPD1-203ENST00000527275 AFG3L2Q9Y4W6 797 aa21.67■■□□□ 1.06
SMPD1-203ENST00000527275 PHIPQ8WWQ0 1821 aa21.66■■□□□ 1.06
SMPD1-203ENST00000527275 BMP3P12645 472 aa21.66■■□□□ 1.06
SMPD1-203ENST00000527275 BACE1P56817 501 aa21.66■■□□□ 1.06
SMPD1-203ENST00000527275 CST9Q5W186 159 aa21.66■■□□□ 1.06
SMPD1-203ENST00000527275 AIFM3Q96NN9 605 aa21.66■■□□□ 1.06
SMPD1-203ENST00000527275 LZTS2Q9BRK4 669 aa21.66■■□□□ 1.06
SMPD1-203ENST00000527275 GBA2Q9HCG7 927 aaPredicted RBP21.66■■□□□ 1.06
SMPD1-203ENST00000527275 CFAP45Q9UL16 551 aa21.66■■□□□ 1.06
SMPD1-203ENST00000527275 STK36Q9NRP7 1315 aa21.66■■□□□ 1.06
SMPD1-203ENST00000527275 SLC16A2P36021 539 aa21.65■■□□□ 1.06
SMPD1-203ENST00000527275 FBXO18Q8NFZ0 1043 aa21.65■■□□□ 1.06
SMPD1-203ENST00000527275 LEO1Q8WVC0 666 aaPredicted RBP21.65■■□□□ 1.06
SMPD1-203ENST00000527275 SYCE3A1L190 88 aa21.65■■□□□ 1.06
SMPD1-203ENST00000527275 PRPF3O43395 683 aaKnown RBP21.65■■□□□ 1.06
SMPD1-203ENST00000527275 OTUD7BQ6GQQ9 843 aa21.65■■□□□ 1.06
SMPD1-203ENST00000527275 SPZ1Q9BXG8 430 aa21.65■■□□□ 1.06
SMPD1-203ENST00000527275 VAT1LQ9HCJ6 419 aa21.65■■□□□ 1.06
SMPD1-203ENST00000527275 EMILIN3Q9NT22 766 aa21.65■■□□□ 1.06
SMPD1-203ENST00000527275 FKBP1BP68106 108 aa21.64■■□□□ 1.06
SMPD1-203ENST00000527275 AKAP17AQ02040 695 aaKnown RBP21.64■■□□□ 1.06
SMPD1-203ENST00000527275 FAM83BQ5T0W9 1011 aa21.64■■□□□ 1.06
SMPD1-203ENST00000527275 ERO1BQ86YB8 467 aa21.64■■□□□ 1.06
SMPD1-203ENST00000527275 OTUD5Q96G74 571 aa21.64■■□□□ 1.06
SMPD1-203ENST00000527275 GJB4Q9NTQ9 266 aa21.64■■□□□ 1.06
SMPD1-203ENST00000527275 DEXIO95424 95 aa21.64■■□□□ 1.05
SMPD1-203ENST00000527275 SMARCA1P28370 1054 aa21.64■■□□□ 1.05
SMPD1-203ENST00000527275 PKN1Q16512 942 aa21.64■■□□□ 1.05
SMPD1-203ENST00000527275 C2orf69Q8N8R5 385 aa21.64■■□□□ 1.05
SMPD1-203ENST00000527275 RGS22Q8NE09 1264 aa21.64■■□□□ 1.05
SMPD1-203ENST00000527275 LPAR1Q92633 364 aa21.64■■□□□ 1.05
SMPD1-203ENST00000527275 TMEM232C9JQI7 657 aa21.63■■□□□ 1.05
SMPD1-203ENST00000527275 IRF6O14896 467 aa21.63■■□□□ 1.05
SMPD1-203ENST00000527275 USP14P54578 494 aa21.63■■□□□ 1.05
SMPD1-203ENST00000527275 HMGCS2P54868 508 aa21.63■■□□□ 1.05
SMPD1-203ENST00000527275 LRSAM1Q6UWE0 723 aa21.63■■□□□ 1.05
SMPD1-203ENST00000527275 ALG1Q9BT22 464 aa21.63■■□□□ 1.05
SMPD1-203ENST00000527275 RIOX1Q9H6W3 641 aa21.63■■□□□ 1.05
SMPD1-203ENST00000527275 MYH6P13533 1939 aa21.63■■□□□ 1.05
SMPD1-203ENST00000527275 SPDYE5A6NIY4 337 aa21.63■■□□□ 1.05
SMPD1-203ENST00000527275 PPATQ06203 517 aa21.63■■□□□ 1.05
SMPD1-203ENST00000527275 C19orf81C9J6K1 198 aa21.62■■□□□ 1.05
SMPD1-203ENST00000527275 YY1P25490 414 aa21.62■■□□□ 1.05
SMPD1-203ENST00000527275 CCDC183Q5T5S1 534 aa21.62■■□□□ 1.05
SMPD1-203ENST00000527275 ATL3Q6DD88 541 aa21.62■■□□□ 1.05
SMPD1-203ENST00000527275 HOMER1Q86YM7 354 aa21.62■■□□□ 1.05
SMPD1-203ENST00000527275 ADGRF4Q8IZF3 695 aa21.62■■□□□ 1.05
SMPD1-203ENST00000527275 ZNF396Q96N95 335 aaPredicted RBP21.62■■□□□ 1.05
SMPD1-203ENST00000527275 VCAM1P19320 739 aa21.61■■□□□ 1.05
SMPD1-203ENST00000527275 IKQ13123 557 aaPredicted RBP21.61■■□□□ 1.05
SMPD1-203ENST00000527275 OPTNQ96CV9 577 aa21.61■■□□□ 1.05
SMPD1-203ENST00000527275 SLC10A4Q96EP9 437 aa21.61■■□□□ 1.05
SMPD1-203ENST00000527275 JMJD4Q9H9V9 463 aa21.61■■□□□ 1.05
SMPD1-203ENST00000527275 GOLGA6L4A6NEF3 574 aa21.61■■□□□ 1.05
SMPD1-203ENST00000527275 UNCXA6NJT0 531 aa21.61■■□□□ 1.05
SMPD1-203ENST00000527275 RBM46Q8TBY0 533 aaKnown RBP21.61■■□□□ 1.05
SMPD1-203ENST00000527275 WASF1Q92558 559 aa21.61■■□□□ 1.05
SMPD1-203ENST00000527275 PIGSQ96S52 555 aa21.61■■□□□ 1.05
SMPD1-203ENST00000527275 WDR46O15213 610 aaKnown RBP21.6■■□□□ 1.05
SMPD1-203ENST00000527275 STAT2P52630 851 aa21.6■■□□□ 1.05
SMPD1-203ENST00000527275 SMC1BQ8NDV3 1235 aa21.6■■□□□ 1.05
SMPD1-203ENST00000527275 PASKQ96RG2 1323 aa21.6■■□□□ 1.05
SMPD1-203ENST00000527275 SCG2P13521 617 aa21.6■■□□□ 1.05
SMPD1-203ENST00000527275 CEBPZQ03701 1054 aaKnown RBP21.6■■□□□ 1.05
SMPD1-203ENST00000527275 PFKFB3Q16875 520 aaPredicted RBP21.6■■□□□ 1.05
SMPD1-203ENST00000527275 BTNL9Q6UXG8 535 aa21.6■■□□□ 1.05
SMPD1-203ENST00000527275 RRP36Q96EU6 259 aaKnown RBP21.6■■□□□ 1.05
SMPD1-203ENST00000527275 PANK2Q9BZ23 570 aa21.6■■□□□ 1.05
SMPD1-203ENST00000527275 FBXO28Q9NVF7 368 aa21.6■■□□□ 1.05
SMPD1-203ENST00000527275 TRPM7Q96QT4 1865 aa21.59■■□□□ 1.05
SMPD1-203ENST00000527275 ZNF784Q8NCA9 323 aaPredicted RBP21.59■■□□□ 1.05
SMPD1-203ENST00000527275 C12orf42Q96LP6 360 aa21.59■■□□□ 1.05
SMPD1-203ENST00000527275 RCOR1Q9UKL0 485 aa21.59■■□□□ 1.05
SMPD1-203ENST00000527275 TOMM70O94826 608 aa21.58■■□□□ 1.05
SMPD1-203ENST00000527275 PPIL2Q13356 520 aa21.58■■□□□ 1.05
SMPD1-203ENST00000527275 USP28Q96RU2 1077 aa21.58■■□□□ 1.05
SMPD1-203ENST00000527275 SEC63Q9UGP8 760 aaKnown RBP21.58■■□□□ 1.05
SMPD1-203ENST00000527275 PTPRFP10586 1907 aa21.58■■□□□ 1.05
SMPD1-203ENST00000527275 LETM1O95202 739 aaPredicted RBP21.58■■□□□ 1.04
SMPD1-203ENST00000527275 SH3D19Q5HYK7 790 aa21.58■■□□□ 1.04
SMPD1-203ENST00000527275 SYDE2Q5VT97 1194 aa21.58■■□□□ 1.04
SMPD1-203ENST00000527275 BRAPQ7Z569 592 aa21.58■■□□□ 1.04
SMPD1-203ENST00000527275 GPKOWQ92917 476 aaPredicted RBP eCLIP21.58■■□□□ 1.04
SMPD1-203ENST00000527275 SHISA4Q96DD7 197 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms