RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 DNAI1Q9UI46 699 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 FLT1P17948 1338 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 ONECUT3O60422 494 aaPredicted RBP19.91■□□□□ 0.78
USH1C-205ENST00000527020 TEX11Q8IYF3 940 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 EYA3Q99504 573 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 POLLQ9UGP5 575 aa19.91■□□□□ 0.78
USH1C-205ENST00000527020 CCDC194A0A1B0GVG4 234 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 KARSQ15046 597 aaKnown RBP19.9■□□□□ 0.78
USH1C-205ENST00000527020 ELF2Q15723 593 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 INF2Q27J81 1249 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 NAALADL2Q58DX5 795 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 GALNT17Q6IS24 598 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 CERS3Q8IU89 383 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 CCDC148Q8NFR7 591 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 NEDD1Q8NHV4 660 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 MYH8P13535 1937 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 ZSCAN12O43309 604 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 FAM163AQ96GL9 167 aaPredicted RBP19.9■□□□□ 0.78
USH1C-205ENST00000527020 RBM17Q96I25 401 aaKnown RBP19.9■□□□□ 0.78
USH1C-205ENST00000527020 SPZ1Q9BXG8 430 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 PODXL2Q9NZ53 605 aa19.9■□□□□ 0.78
USH1C-205ENST00000527020 PP2D1A8MPX8 630 aa19.89■□□□□ 0.77
USH1C-205ENST00000527020 KLRF2D3W0D1 207 aa19.89■□□□□ 0.77
USH1C-205ENST00000527020 RPN1P04843 607 aaKnown RBP19.89■□□□□ 0.77
USH1C-205ENST00000527020 ST5P78524 1137 aa19.89■□□□□ 0.77
USH1C-205ENST00000527020 RRAGBQ5VZM2 374 aa19.89■□□□□ 0.77
USH1C-205ENST00000527020 TBC1D16Q8TBP0 767 aa19.89■□□□□ 0.77
USH1C-205ENST00000527020 LZTS2Q9BRK4 669 aa19.89■□□□□ 0.77
USH1C-205ENST00000527020 DISC1Q9NRI5 854 aa19.89■□□□□ 0.77
USH1C-205ENST00000527020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.89■□□□□ 0.77
USH1C-205ENST00000527020 GAKO14976 1311 aa19.89■□□□□ 0.77
USH1C-205ENST00000527020 MFSD14BQ5SR56 506 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 ZNF658Q5TYW1 1059 aaPredicted RBP19.88■□□□□ 0.77
USH1C-205ENST00000527020 PANX2Q96RD6 677 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 RWDD2AQ9UIY3 292 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 AKR1B15C9JRZ8 316 aaPredicted RBP19.88■□□□□ 0.77
USH1C-205ENST00000527020 HOXA10P31260 410 aaPredicted RBP19.88■□□□□ 0.77
USH1C-205ENST00000527020 DDR1Q08345 913 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 RBL2Q08999 1139 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 DTHD1Q6ZMT9 781 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 SEPT12Q8IYM1 358 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 IGSF22Q8N9C0 903 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 CTAGE1Q96RT6 745 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 ZMYND12Q9H0C1 365 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 ZNF287Q9HBT7 754 aa19.88■□□□□ 0.77
USH1C-205ENST00000527020 SPDYE4A6NLX3 237 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 BBOX1O75936 387 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 STAT6P42226 847 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 NOVP48745 357 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 CBX1P83916 185 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 MTF1Q14872 753 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 KMT5BQ4FZB7 885 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 LRRC15Q8TF66 581 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 LIMA1Q9UHB6 759 aaKnown RBP19.87■□□□□ 0.77
USH1C-205ENST00000527020 GDAQ9Y2T3 454 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 ANKRD31Q8N7Z5 1873 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 LRRC10BA6NIK2 292 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 PLCG2P16885 1265 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 TXLNAP40222 546 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 KRT31Q15323 416 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 USP17L2Q6R6M4 530 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 FAM177A1Q8N128 213 aaPredicted RBP19.87■□□□□ 0.77
USH1C-205ENST00000527020 CEP95Q96GE4 821 aa19.87■□□□□ 0.77
USH1C-205ENST00000527020 AFF2P51816 1311 aa19.86■□□□□ 0.77
USH1C-205ENST00000527020 PAK1Q13153 545 aa19.86■□□□□ 0.77
USH1C-205ENST00000527020 ZNF397Q8NF99 534 aaPredicted RBP19.86■□□□□ 0.77
USH1C-205ENST00000527020 NELFBQ8WX92 580 aa19.86■□□□□ 0.77
USH1C-205ENST00000527020 DESI2Q9BSY9 194 aa19.86■□□□□ 0.77
USH1C-205ENST00000527020 PARP3Q9Y6F1 533 aa19.86■□□□□ 0.77
USH1C-205ENST00000527020 PARP1P09874 1014 aaKnown RBP19.85■□□□□ 0.77
USH1C-205ENST00000527020 PRCPP42785 496 aa19.85■□□□□ 0.77
USH1C-205ENST00000527020 FBXO38Q6PIJ6 1188 aa19.85■□□□□ 0.77
USH1C-205ENST00000527020 WDR24Q96S15 920 aa19.85■□□□□ 0.77
USH1C-205ENST00000527020 FEZ1Q99689 392 aa19.85■□□□□ 0.77
USH1C-205ENST00000527020 CCSER1Q9C0I3 900 aa19.85■□□□□ 0.77
USH1C-205ENST00000527020 RMND1Q9NWS8 449 aa19.85■□□□□ 0.77
USH1C-205ENST00000527020 SOWAHDA6NJG2 315 aa19.85■□□□□ 0.77
USH1C-205ENST00000527020 PRPHP41219 470 aa19.85■□□□□ 0.77
USH1C-205ENST00000527020 ERCC6LQ2NKX8 1250 aa19.85■□□□□ 0.77
USH1C-205ENST00000527020 ITIH6Q6UXX5 1313 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 KLRG2A4D1S0 409 aaPredicted RBP19.84■□□□□ 0.77
USH1C-205ENST00000527020 GOLGA6L9A6NEM1 432 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 POLRMTO00411 1230 aaKnown RBP19.84■□□□□ 0.77
USH1C-205ENST00000527020 LAD1O00515 517 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 KLRC4O43908 158 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 MFAP3LO75121 409 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 GYPCP04921 128 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 CCT6AP40227 531 aaKnown RBP19.84■□□□□ 0.77
USH1C-205ENST00000527020 NAPAP54920 295 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 FILIP1LQ4L180 1135 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 RAD9BQ6WBX8 426 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 PPFIBP1Q86W92 1011 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 CRAMP1Q96RY5 1269 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 MAPK8IP1Q9UQF2 711 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 DAGLAQ9Y4D2 1042 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 QSER1Q2KHR3 1735 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 TBC1D22AQ8WUA7 517 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 CPLX3Q8WVH0 158 aa19.84■□□□□ 0.77
USH1C-205ENST00000527020 MRPL44Q9H9J2 332 aaKnown RBP19.84■□□□□ 0.77
USH1C-205ENST00000527020 KBTBD4Q9NVX7 518 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms