RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TNRC6CQ9HCJ0 1690 aaKnown RBP13.15□□□□□ -0.3
LINC01001-201ENST00000526704 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 CALML3P27482 149 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 KIF5BP33176 963 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 STAT6P42226 847 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 KIF4BQ2VIQ3 1234 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 NAALADL2Q58DX5 795 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 TYW1BQ6NUM6 668 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 IRF2BP1Q8IU81 584 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 MSANTD4Q8NCY6 345 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 PNKPQ96T60 521 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 TMEM51Q9NW97 253 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 PCDHA4Q9UN74 947 aa13.15□□□□□ -0.3
LINC01001-201ENST00000526704 THRAP3Q9Y2W1 955 aaKnown RBP13.15□□□□□ -0.3
LINC01001-201ENST00000526704 M0R2N6 131 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 TUBB2AQ13885 445 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 SLC4A8Q2Y0W8 1093 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 BICDL1Q6ZP65 573 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 STAG2Q8N3U4 1231 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 ANKRD20A12PQ8NF67 263 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 TUBB2BQ9BVA1 445 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 SH3GLB2Q9NR46 395 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 USP17L8P0C7I0 530 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 HIBADHP31937 336 aaKnown RBP13.14□□□□□ -0.31
LINC01001-201ENST00000526704 SLC10A5Q5PT55 438 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 ADSSL1Q8N142 457 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 NAPGQ99747 312 aaPredicted RBP13.14□□□□□ -0.31
LINC01001-201ENST00000526704 SLF1Q9BQI6 1058 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 KAT14Q9H8E8 782 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 ZCCHC17Q9NP64 241 aaKnown RBP13.14□□□□□ -0.31
LINC01001-201ENST00000526704 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 RAB21Q9UL25 225 aa13.14□□□□□ -0.31
LINC01001-201ENST00000526704 REXO2Q9Y3B8 237 aaKnown RBP13.14□□□□□ -0.31
LINC01001-201ENST00000526704 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
LINC01001-201ENST00000526704 PP2D1A8MPX8 630 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 MAP2K7O14733 419 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 KCNQ2O43526 872 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 PARP1P09874 1014 aaKnown RBP13.13□□□□□ -0.31
LINC01001-201ENST00000526704 KRT9P35527 623 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 USP5P45974 858 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 PMS1P54277 932 aaKnown RBP13.13□□□□□ -0.31
LINC01001-201ENST00000526704 UBXN1Q04323 297 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 SLC35G1Q2M3R5 365 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 TBC1D9BQ66K14 1250 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 WWC2Q6AWC2 1192 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 JAG2Q9Y219 1238 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 KLRC4O43908 158 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 ST5P78524 1137 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 GRM4Q14833 912 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 PNMA1Q8ND90 353 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 HNRNPLLQ8WVV9 542 aaKnown RBP13.13□□□□□ -0.31
LINC01001-201ENST00000526704 CHP1Q99653 195 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 TMEM60Q9H2L4 133 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 MCM9Q9NXL9 1143 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 MYO1AQ9UBC5 1043 aa13.13□□□□□ -0.31
LINC01001-201ENST00000526704 ROBO3Q96MS0 1386 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 IRS2Q9Y4H2 1338 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 LGALS16A8MUM7 142 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 H3BQF6 201 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 H7C1D1 291 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 RPS8P62241 208 aaKnown RBP13.12□□□□□ -0.31
LINC01001-201ENST00000526704 AMPD2Q01433 879 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 TFAP4Q01664 338 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 BEND6Q5SZJ8 279 aaPredicted RBP13.12□□□□□ -0.31
LINC01001-201ENST00000526704 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 LRRC15Q8TF66 581 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 SMARCC1Q92922 1105 aaPredicted RBP13.12□□□□□ -0.31
LINC01001-201ENST00000526704 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
LINC01001-201ENST00000526704 MAD2L2Q9UI95 211 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 PCDHA6Q9UN73 950 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 PCDHA8Q9Y5H6 950 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 TTC26A0AVF1 554 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 WHAMMP3Q1A5X7 153 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 TXNRD3Q86VQ6 643 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 ZNF507Q8TCN5 953 aa13.12□□□□□ -0.31
LINC01001-201ENST00000526704 NDUFA10O95299 355 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 KCNB1Q14721 858 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 C12orf60Q5U649 245 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 DTHD1Q6ZMT9 781 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 DGKHQ86XP1 1220 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 MB21D1Q8N884 522 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 DAGLBQ8NCG7 672 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 ANKS1AQ92625 1134 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 DYNLL2Q96FJ2 89 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 DNAJC7Q99615 494 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 TRIM10Q9UDY6 481 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 CCDC194A0A1B0GVG4 234 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 KCNQ4P56696 695 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 INF2Q27J81 1249 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 NEK11Q8NG66 645 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 ANKRD2Q9GZV1 360 aa13.11□□□□□ -0.31
LINC01001-201ENST00000526704 EPN1Q9Y6I3 576 aaPredicted RBP13.11□□□□□ -0.31
LINC01001-201ENST00000526704 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 A0A1W2PQC6 194 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 STXBP3O00186 592 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 CYTH3O43739 400 aa13.1□□□□□ -0.31
LINC01001-201ENST00000526704 EEF1GP26641 437 aaKnown RBP13.1□□□□□ -0.31
LINC01001-201ENST00000526704 DZIP1Q86YF9 867 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms