RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 UBP1Q9NZI7 540 aa7.53□□□□□ -1.2
CSDE1-210ENST00000525878 TNFRSF10DQ9UBN6 386 aa7.53□□□□□ -1.2
CSDE1-210ENST00000525878 GGT7Q9UJ14 662 aa7.53□□□□□ -1.2
CSDE1-210ENST00000525878 SSU72P8A0A1W2PR75 194 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 FADS2P1A8MWK0 482 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 B8ZZF3 427 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 ERVFRD-1P60508 538 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 SEZ6Q53EL9 994 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 HS2ST1Q7LGA3 356 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 SLITRK4Q8IW52 837 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 KCNC2Q96PR1 638 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 ANTXR1Q9H6X2 564 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 PARD6AQ9NPB6 346 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 CHST7Q9NS84 486 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 MINPP1Q9UNW1 487 aa7.52□□□□□ -1.21
CSDE1-210ENST00000525878 FKTNO75072 461 aa7.51□□□□□ -1.21
CSDE1-210ENST00000525878 VIPR1P32241 457 aa7.51□□□□□ -1.21
CSDE1-210ENST00000525878 CTSWP56202 376 aa7.51□□□□□ -1.21
CSDE1-210ENST00000525878 RTP1P59025 263 aa7.51□□□□□ -1.21
CSDE1-210ENST00000525878 SRSF3P84103 164 aaKnown RBP7.51□□□□□ -1.21
CSDE1-210ENST00000525878 LRRFIP1Q32MZ4 808 aaKnown RBP7.51□□□□□ -1.21
CSDE1-210ENST00000525878 TCERG1LQ5VWI1 586 aa7.51□□□□□ -1.21
CSDE1-210ENST00000525878 GK5Q6ZS86 529 aa7.51□□□□□ -1.21
CSDE1-210ENST00000525878 ZNF512BQ96KM6 892 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-210ENST00000525878 NT5C1AQ9BXI3 368 aa7.51□□□□□ -1.21
CSDE1-210ENST00000525878 PRR13Q9NZ81 148 aa7.51□□□□□ -1.21
CSDE1-210ENST00000525878 ZNF205O95201 554 aa7.5□□□□□ -1.21
CSDE1-210ENST00000525878 BMP8BP34820 402 aa7.5□□□□□ -1.21
CSDE1-210ENST00000525878 CTSKP43235 329 aa7.5□□□□□ -1.21
CSDE1-210ENST00000525878 ZNF165P49910 485 aa7.5□□□□□ -1.21
CSDE1-210ENST00000525878 APOBRQ0VD83 1088 aa7.5□□□□□ -1.21
CSDE1-210ENST00000525878 HSF5Q4G112 596 aaPredicted RBP7.5□□□□□ -1.21
CSDE1-210ENST00000525878 SIGLEC10Q96LC7 697 aa7.5□□□□□ -1.21
CSDE1-210ENST00000525878 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
CSDE1-210ENST00000525878 CNTD2Q9H8S5 307 aa7.5□□□□□ -1.21
CSDE1-210ENST00000525878 ERVK13-1Q9NX77 482 aa7.5□□□□□ -1.21
CSDE1-210ENST00000525878 RFXAPO00287 272 aa7.49□□□□□ -1.21
CSDE1-210ENST00000525878 N4BP3O15049 544 aa7.49□□□□□ -1.21
CSDE1-210ENST00000525878 KIR3DS1Q14943 382 aa7.49□□□□□ -1.21
CSDE1-210ENST00000525878 LDLRAD1Q5T700 205 aa7.49□□□□□ -1.21
CSDE1-210ENST00000525878 SLCO6A1Q86UG4 719 aa7.49□□□□□ -1.21
CSDE1-210ENST00000525878 TMEM151BQ8IW70 566 aa7.49□□□□□ -1.21
CSDE1-210ENST00000525878 MARCH10Q8NA82 808 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-210ENST00000525878 DACT3Q96B18 629 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-210ENST00000525878 SLC6A18Q96N87 628 aa7.49□□□□□ -1.21
CSDE1-210ENST00000525878 BCL2L13Q9BXK5 485 aa7.49□□□□□ -1.21
CSDE1-210ENST00000525878 GZF1Q9H116 711 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-210ENST00000525878 EPB41L4AQ9HCS5 686 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-210ENST00000525878 IRS4O14654 1257 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-210ENST00000525878 BMP7P18075 431 aa7.48□□□□□ -1.21
CSDE1-210ENST00000525878 ENDOUP21128 410 aaKnown RBP7.48□□□□□ -1.21
CSDE1-210ENST00000525878 EPHB3P54753 998 aa7.48□□□□□ -1.21
CSDE1-210ENST00000525878 GALNT18Q6P9A2 607 aa7.48□□□□□ -1.21
CSDE1-210ENST00000525878 PANK1Q8TE04 598 aa7.48□□□□□ -1.21
CSDE1-210ENST00000525878 EAF1Q96JC9 268 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-210ENST00000525878 SLC9A7Q96T83 725 aa7.48□□□□□ -1.21
CSDE1-210ENST00000525878 SIRT5Q9NXA8 310 aa7.48□□□□□ -1.21
CSDE1-210ENST00000525878 GFOD1Q9NXC2 390 aa7.48□□□□□ -1.21
CSDE1-210ENST00000525878 KLHL14Q9P2G3 628 aa7.48□□□□□ -1.21
CSDE1-210ENST00000525878 GPR55Q9Y2T6 319 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-210ENST00000525878 PCDHB12Q9Y5F1 795 aa7.48□□□□□ -1.21
CSDE1-210ENST00000525878 A0A0G2JLL6 359 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-210ENST00000525878 A0A1W2PQ45 241 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-210ENST00000525878 A0A1W2PQY0 241 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 WTIPA6NIX2 430 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-210ENST00000525878 ABLIM1O14639 778 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 SHOXO15266 292 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 TRIM13O60858 407 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 PI3P19957 117 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 SDHBP21912 280 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 MCM4P33991 863 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 BUD31P41223 144 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-210ENST00000525878 AUHQ13825 339 aaKnown RBP7.47□□□□□ -1.21
CSDE1-210ENST00000525878 ZNF326Q5BKZ1 582 aaKnown RBP7.47□□□□□ -1.21
CSDE1-210ENST00000525878 INTS3Q68E01 1043 aaKnown RBP7.47□□□□□ -1.21
CSDE1-210ENST00000525878 TMEM52Q8NDY8 209 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 GIPC2Q8TF65 315 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 NKD1Q969G9 470 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 MKRN2Q9H000 416 aaKnown RBP7.47□□□□□ -1.21
CSDE1-210ENST00000525878 ACSL6Q9UKU0 697 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 IRAK3Q9Y616 596 aa7.47□□□□□ -1.21
CSDE1-210ENST00000525878 VAV1P15498 845 aa7.46□□□□□ -1.22
CSDE1-210ENST00000525878 CDR1P51861 262 aa7.46□□□□□ -1.22
CSDE1-210ENST00000525878 LAPTM5Q13571 262 aa7.46□□□□□ -1.22
CSDE1-210ENST00000525878 ZCCHC4Q9H5U6 513 aa7.46□□□□□ -1.22
CSDE1-210ENST00000525878 SUCOQ9UBS9 1254 aaKnown RBP7.46□□□□□ -1.22
CSDE1-210ENST00000525878 TAF6LQ9Y6J9 622 aa7.46□□□□□ -1.22
CSDE1-210ENST00000525878 MPOP05164 745 aa7.45□□□□□ -1.22
CSDE1-210ENST00000525878 ACRP10323 421 aa7.45□□□□□ -1.22
CSDE1-210ENST00000525878 RTP2Q5QGT7 225 aa7.45□□□□□ -1.22
CSDE1-210ENST00000525878 OLFML2BQ68BL8 750 aa7.45□□□□□ -1.22
CSDE1-210ENST00000525878 TMEFF1Q8IYR6 380 aa7.45□□□□□ -1.22
CSDE1-210ENST00000525878 MZB1Q8WU39 189 aa7.45□□□□□ -1.22
CSDE1-210ENST00000525878 RELTQ969Z4 430 aa7.45□□□□□ -1.22
CSDE1-210ENST00000525878 TNFRSF12AQ9NP84 129 aa7.45□□□□□ -1.22
CSDE1-210ENST00000525878 ZNRF3Q9ULT6 936 aa7.45□□□□□ -1.22
CSDE1-210ENST00000525878 ADAMTS20P59510 1910 aa7.44□□□□□ -1.22
CSDE1-210ENST00000525878 MEIS1O00470 390 aa7.44□□□□□ -1.22
CSDE1-210ENST00000525878 CBX2Q14781 532 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-210ENST00000525878 CRTC3Q6UUV7 619 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms