RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 GJA5P36382 358 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 SLC1A4P43007 532 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 GNAQP50148 359 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 FOSBP53539 338 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 HMGCS2P54868 508 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 PPATQ06203 517 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 SSRP1Q08945 709 aaKnown RBP7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 ZNF543Q08ER8 600 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 MTMR2Q13614 643 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 PPP2R5BQ15173 497 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 ASPRV1Q53RT3 343 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 FAM83BQ5T0W9 1011 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 FBXO46Q6PJ61 603 aaPredicted RBP7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 TMTC3Q6ZXV5 915 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 STAG2Q8N3U4 1231 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 SRBD1Q8N5C6 995 aaKnown RBP7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 PHKBQ93100 1093 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 INTS4Q96HW7 963 aaKnown RBP7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 MAP3K14Q99558 947 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 LLPHQ9BRT6 129 aaKnown RBP7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 SLC26A6Q9BXS9 759 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 UBA5Q9GZZ9 404 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 VCPKMTQ9H867 229 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 MAD2L2Q9UI95 211 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 AFG3L2Q9Y4W6 797 aa7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.39□□□□□ -1.23
ATPAF1-207ENST00000525633 NID2Q14112 1375 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 hCG_1642624A0A1W2PR95 340 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 SPDYE5A6NIY4 337 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 C19orf81C9J6K1 198 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 TMEM232C9JQI7 657 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 IGF2BP3O00425 579 aaKnown RBP eCLIP7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 SNHG28P0DPA3 235 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 SLC16A2P36021 539 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 USP14P54578 494 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 BACE1P56817 501 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 AKAP17AQ02040 695 aaKnown RBP7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 IKQ13123 557 aaPredicted RBP7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 PPIL2Q13356 520 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 NTRK3Q16288 839 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 GADL1Q6ZQY3 521 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 NBPF11Q86T75 865 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 TRIM22Q8IYM9 498 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 NSUN7Q8NE18 718 aaKnown RBP7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 OPTNQ96CV9 577 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 GMCL1Q96IK5 515 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 PTPN18Q99952 460 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 LZTS2Q9BRK4 669 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 KIAA1683Q9H0B3 1180 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 EMILIN3Q9NT22 766 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 TMOD4Q9NZQ9 345 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 ORC3Q9UBD5 711 aaPredicted RBP7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 SYNPO2Q9UMS6 1093 aa7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 V9GY48 417 aaPredicted RBP7.38□□□□□ -1.23
ATPAF1-207ENST00000525633 CNTNAP5Q8WYK1 1306 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 CXCL11O14625 94 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 IRF6O14896 467 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 PRPF3O43395 683 aaKnown RBP7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 FMNL1O95466 1100 aaPredicted RBP7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 IFNAR1P17181 557 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 SNAP25P60880 206 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 HMGN5P82970 282 aaKnown RBP7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 FUT2Q10981 343 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 SLC35G1Q2M3R5 365 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 GPATCH4Q5T3I0 446 aaKnown RBP7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 SYDE2Q5VT97 1194 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 OTUD7BQ6GQQ9 843 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 FAM184AQ8NB25 1140 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 SMARCC2Q8TAQ2 1214 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 CHURC1Q8WUH1 139 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 LPAR1Q92633 364 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 MS4A4AQ96JQ5 239 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 TANGO6Q9C0B7 1094 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 CWC22Q9HCG8 908 aaKnown RBP7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 MYH7BA7E2Y1 1941 aa7.37□□□□□ -1.23
ATPAF1-207ENST00000525633 RBBP6Q7Z6E9 1792 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 STK36Q9NRP7 1315 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 A0A0G2JLL6 359 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 WDR46O15213 610 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 CYTH3O43739 400 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 DEXIO95424 95 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 FDPSP14324 419 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 VCAM1P19320 739 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 SMARCA1P28370 1054 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 CRHR2Q13324 411 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 SNAPC2Q13487 334 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 OTOP1Q7RTM1 612 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 PRRT2Q7Z6L0 340 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 HOMER1Q86YM7 354 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 ADGRF4Q8IZF3 695 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 WASF1Q92558 559 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 KIFC2Q96AC6 838 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 RRP36Q96EU6 259 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 C12orf42Q96LP6 360 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 AIFM3Q96NN9 605 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 PIGSQ96S52 555 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 ALG1Q9BT22 464 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 SPZ1Q9BXG8 430 aa7.36□□□□□ -1.23
ATPAF1-207ENST00000525633 RPAP3Q9H6T3 665 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms