RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 DNAJC25-GNG10A0A024R161 153 aa20.48■□□□□ 0.87
TSKU-202ENST00000525167 IGKV6D-41A0A0C4DH26 115 aa20.48■□□□□ 0.87
TSKU-202ENST00000525167 A0A1W2PQ45 241 aaPredicted RBP20.48■□□□□ 0.87
TSKU-202ENST00000525167 A0A1W2PQY0 241 aa20.48■□□□□ 0.87
TSKU-202ENST00000525167 TRIM43BA6NCK2 446 aa20.48■□□□□ 0.87
TSKU-202ENST00000525167 MINDY4BA8MYZ0 360 aa20.48■□□□□ 0.87
TSKU-202ENST00000525167 PGK1P00558 417 aa20.48■□□□□ 0.87
TSKU-202ENST00000525167 CLTBP09497 229 aa20.48■□□□□ 0.87
TSKU-202ENST00000525167 TAL1P17542 331 aaPredicted RBP20.48■□□□□ 0.87
TSKU-202ENST00000525167 SMAD3P84022 425 aaKnown RBP20.48■□□□□ 0.87
TSKU-202ENST00000525167 MKL1Q969V6 931 aa20.48■□□□□ 0.87
TSKU-202ENST00000525167 TRIM43Q96BQ3 446 aaPredicted RBP20.48■□□□□ 0.87
TSKU-202ENST00000525167 DCTPP1Q9H773 170 aa20.48■□□□□ 0.87
TSKU-202ENST00000525167 GPAA1O43292 621 aa20.47■□□□□ 0.87
TSKU-202ENST00000525167 ZBED4O75132 1171 aa20.47■□□□□ 0.87
TSKU-202ENST00000525167 ADAMTS4O75173 837 aa20.47■□□□□ 0.87
TSKU-202ENST00000525167 C9orf50Q5SZB4 431 aa20.47■□□□□ 0.87
TSKU-202ENST00000525167 C20orf194Q5TEA3 1177 aa20.47■□□□□ 0.87
TSKU-202ENST00000525167 SH3RF1Q7Z6J0 888 aa20.47■□□□□ 0.87
TSKU-202ENST00000525167 NUP133Q8WUM0 1156 aa20.47■□□□□ 0.87
TSKU-202ENST00000525167 DDX11Q96FC9 970 aa20.47■□□□□ 0.87
TSKU-202ENST00000525167 TOX2Q96NM4 488 aa20.47■□□□□ 0.87
TSKU-202ENST00000525167 NUP88Q99567 741 aaPredicted RBP20.47■□□□□ 0.87
TSKU-202ENST00000525167 FAM184BQ9ULE4 1060 aa20.47■□□□□ 0.87
TSKU-202ENST00000525167 MOXD2PA6NHM9 499 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 KIAA0355O15063 1070 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 TDO2P48775 406 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 OAZ1P54368 228 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 ANKRD33Q7Z3H0 272 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 ZNF444Q8N0Y2 327 aaPredicted RBP20.46■□□□□ 0.87
TSKU-202ENST00000525167 GMCL1P1Q8NEA9 526 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 SLC38A10Q9HBR0 1119 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 EPB41L4AQ9HCS5 686 aaPredicted RBP20.46■□□□□ 0.87
TSKU-202ENST00000525167 CLIP2Q9UDT6 1046 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 FBXO40Q9UH90 709 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 FEM1BQ9UK73 627 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 CTDP1Q9Y5B0 961 aaPredicted RBP20.46■□□□□ 0.87
TSKU-202ENST00000525167 PLIN4Q96Q06 1357 aa20.46■□□□□ 0.87
TSKU-202ENST00000525167 UNC80Q8N2C7 3258 aa20.45■□□□□ 0.86
TSKU-202ENST00000525167 SMCHD1A6NHR9 2005 aa20.45■□□□□ 0.86
TSKU-202ENST00000525167 TTLL1O95922 423 aa20.45■□□□□ 0.86
TSKU-202ENST00000525167 FDX1P10109 184 aa20.45■□□□□ 0.86
TSKU-202ENST00000525167 MTMR4Q9NYA4 1195 aa20.45■□□□□ 0.86
TSKU-202ENST00000525167 RIPK3Q9Y572 518 aa20.45■□□□□ 0.86
TSKU-202ENST00000525167 SYNRGQ9UMZ2 1314 aa20.45■□□□□ 0.86
TSKU-202ENST00000525167 CUL9Q8IWT3 2517 aa20.44■□□□□ 0.86
TSKU-202ENST00000525167 TMEM265A0A087WTH1 108 aa20.44■□□□□ 0.86
TSKU-202ENST00000525167 PATL2C9JE40 543 aaKnown RBP20.44■□□□□ 0.86
TSKU-202ENST00000525167 DUSP11O75319 330 aaKnown RBP20.44■□□□□ 0.86
TSKU-202ENST00000525167 SNAI1O95863 264 aaPredicted RBP20.44■□□□□ 0.86
TSKU-202ENST00000525167 CST5P28325 142 aaPredicted RBP20.44■□□□□ 0.86
TSKU-202ENST00000525167 ACLYP53396 1101 aa20.44■□□□□ 0.86
TSKU-202ENST00000525167 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.44■□□□□ 0.86
TSKU-202ENST00000525167 KLHDC9Q8NEP7 349 aa20.44■□□□□ 0.86
TSKU-202ENST00000525167 CHST13Q8NET6 341 aa20.44■□□□□ 0.86
TSKU-202ENST00000525167 CEP95Q96GE4 821 aa20.44■□□□□ 0.86
TSKU-202ENST00000525167 FAM161BQ96MY7 647 aa20.44■□□□□ 0.86
TSKU-202ENST00000525167 NACAP1Q9BZK3 213 aa20.44■□□□□ 0.86
TSKU-202ENST00000525167 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
TSKU-202ENST00000525167 PQBP1O60828 265 aaKnown RBP20.43■□□□□ 0.86
TSKU-202ENST00000525167 APPP05067 770 aa20.43■□□□□ 0.86
TSKU-202ENST00000525167 RAG1P15918 1043 aa20.43■□□□□ 0.86
TSKU-202ENST00000525167 IFNL3Q8IZI9 196 aa20.43■□□□□ 0.86
TSKU-202ENST00000525167 STK11IPQ8N1F8 1099 aa20.43■□□□□ 0.86
TSKU-202ENST00000525167 KIFC2Q96AC6 838 aa20.43■□□□□ 0.86
TSKU-202ENST00000525167 SEMA6BQ9H3T3 888 aa20.43■□□□□ 0.86
TSKU-202ENST00000525167 ABHD16BQ9H3Z7 469 aa20.43■□□□□ 0.86
TSKU-202ENST00000525167 STARD7Q9NQZ5 370 aa20.43■□□□□ 0.86
TSKU-202ENST00000525167 MROH7Q68CQ1 1323 aa20.43■□□□□ 0.86
TSKU-202ENST00000525167 MYH4Q9Y623 1939 aa20.43■□□□□ 0.86
TSKU-202ENST00000525167 DCDC2CA8MYV0 355 aa20.42■□□□□ 0.86
TSKU-202ENST00000525167 ERC2O15083 957 aa20.42■□□□□ 0.86
TSKU-202ENST00000525167 SLC3A2P08195 630 aaKnown RBP20.42■□□□□ 0.86
TSKU-202ENST00000525167 PDE4BQ07343 736 aa20.42■□□□□ 0.86
TSKU-202ENST00000525167 ACVR2BQ13705 512 aa20.42■□□□□ 0.86
TSKU-202ENST00000525167 PPP4R3BQ5MIZ7 849 aa20.42■□□□□ 0.86
TSKU-202ENST00000525167 CCSAPQ6IQ19 270 aaPredicted RBP20.42■□□□□ 0.86
TSKU-202ENST00000525167 CPXCR1Q8N123 301 aa20.42■□□□□ 0.86
TSKU-202ENST00000525167 ANKRD35Q8N283 1001 aa20.42■□□□□ 0.86
TSKU-202ENST00000525167 NEDD1Q8NHV4 660 aa20.42■□□□□ 0.86
TSKU-202ENST00000525167 LENG1Q96BZ8 264 aaPredicted RBP20.42■□□□□ 0.86
TSKU-202ENST00000525167 CDX2Q99626 313 aaPredicted RBP20.42■□□□□ 0.86
TSKU-202ENST00000525167 TMEM39AQ9NV64 488 aa20.42■□□□□ 0.86
TSKU-202ENST00000525167 ZHX1Q9UKY1 873 aaPredicted RBP20.42■□□□□ 0.86
TSKU-202ENST00000525167 ELP1O95163 1332 aa20.42■□□□□ 0.86
TSKU-202ENST00000525167 M0R2C6 588 aa20.41■□□□□ 0.86
TSKU-202ENST00000525167 PRDM1O75626 825 aa20.41■□□□□ 0.86
TSKU-202ENST00000525167 ITGB8P26012 769 aa20.41■□□□□ 0.86
TSKU-202ENST00000525167 FPGSQ05932 587 aa20.41■□□□□ 0.86
TSKU-202ENST00000525167 FAAP100Q0VG06 881 aa20.41■□□□□ 0.86
TSKU-202ENST00000525167 KCNA10Q16322 511 aa20.41■□□□□ 0.86
TSKU-202ENST00000525167 TSHZ3Q63HK5 1081 aa20.41■□□□□ 0.86
TSKU-202ENST00000525167 PCSK9Q8NBP7 692 aaKnown RBP20.41■□□□□ 0.86
TSKU-202ENST00000525167 RNPC3Q96LT9 517 aaKnown RBP20.41■□□□□ 0.86
TSKU-202ENST00000525167 SPC25Q9HBM1 224 aa20.41■□□□□ 0.86
TSKU-202ENST00000525167 RAVER2Q9HCJ3 691 aaKnown RBP20.41■□□□□ 0.86
TSKU-202ENST00000525167 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.41■□□□□ 0.86
TSKU-202ENST00000525167 TSPY3P0CV98 308 aa20.4■□□□□ 0.86
TSKU-202ENST00000525167 TSPY8P0CW00 308 aa20.4■□□□□ 0.86
TSKU-202ENST00000525167 BMP3P12645 472 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms