RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 LRRC10BA6NIK2 292 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 GLI1P08151 1106 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 CHMP4BP1P59074 171 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 MTERF2Q49AM1 385 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 EGFLAMQ63HQ2 1017 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 VHLLQ6RSH7 139 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 PHACTR4Q8IZ21 702 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 RNF141Q8WVD5 230 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 FAM84AQ96KN4 292 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 Q96M66 194 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 GPR62Q9BZJ7 368 aa8.53□□□□□ -1.04
SKP1-213ENST00000524288 SBNO2Q9Y2G9 1366 aa8.52□□□□□ -1.05
SKP1-213ENST00000524288 RASGRF1Q13972 1273 aa8.52□□□□□ -1.05
SKP1-213ENST00000524288 SPATC1Q76KD6 591 aa8.52□□□□□ -1.05
SKP1-213ENST00000524288 KIF2CQ99661 725 aa8.52□□□□□ -1.05
SKP1-213ENST00000524288 GPATCH2Q9NW75 528 aa8.52□□□□□ -1.05
SKP1-213ENST00000524288 TNFRSF10CO14798 259 aa8.51□□□□□ -1.05
SKP1-213ENST00000524288 DIAPH1O60610 1272 aaKnown RBP8.51□□□□□ -1.05
SKP1-213ENST00000524288 ESR1P03372 595 aa8.51□□□□□ -1.05
SKP1-213ENST00000524288 SRFP11831 508 aa8.51□□□□□ -1.05
SKP1-213ENST00000524288 RAC2P15153 192 aa8.51□□□□□ -1.05
SKP1-213ENST00000524288 GAB4Q2WGN9 574 aa8.51□□□□□ -1.05
SKP1-213ENST00000524288 TMEM67Q5HYA8 995 aa8.51□□□□□ -1.05
SKP1-213ENST00000524288 CDCP2Q5VXM1 449 aa8.51□□□□□ -1.05
SKP1-213ENST00000524288 DTWD2Q8NBA8 298 aa8.51□□□□□ -1.05
SKP1-213ENST00000524288 DUSP15Q9H1R2 295 aaPredicted RBP8.51□□□□□ -1.05
SKP1-213ENST00000524288 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.51□□□□□ -1.05
SKP1-213ENST00000524288 TMEM59LQ9UK28 342 aa8.51□□□□□ -1.05
SKP1-213ENST00000524288 ESYT3A0FGR9 886 aa8.5□□□□□ -1.05
SKP1-213ENST00000524288 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.5□□□□□ -1.05
SKP1-213ENST00000524288 MESP2Q0VG99 397 aa8.5□□□□□ -1.05
SKP1-213ENST00000524288 FYB2Q5VWT5 728 aa8.5□□□□□ -1.05
SKP1-213ENST00000524288 TDRD10Q5VZ19 366 aaKnown RBP8.5□□□□□ -1.05
SKP1-213ENST00000524288 KIAA1211LQ6NV74 962 aa8.5□□□□□ -1.05
SKP1-213ENST00000524288 LRP10Q7Z4F1 713 aa8.5□□□□□ -1.05
SKP1-213ENST00000524288 TAB3Q8N5C8 712 aaPredicted RBP8.5□□□□□ -1.05
SKP1-213ENST00000524288 ASPNQ9BXN1 380 aa8.5□□□□□ -1.05
SKP1-213ENST00000524288 FANCLQ9NW38 375 aa8.5□□□□□ -1.05
SKP1-213ENST00000524288 SLAMF8Q9P0V8 285 aa8.5□□□□□ -1.05
SKP1-213ENST00000524288 KDM2BQ8NHM5 1336 aa8.5□□□□□ -1.05
SKP1-213ENST00000524288 DBX1A6NMT0 343 aa8.49□□□□□ -1.05
SKP1-213ENST00000524288 PPM1GO15355 546 aaPredicted RBP8.49□□□□□ -1.05
SKP1-213ENST00000524288 HSP90B1P14625 803 aaKnown RBP8.49□□□□□ -1.05
SKP1-213ENST00000524288 TPP2P29144 1249 aaPredicted RBP8.49□□□□□ -1.05
SKP1-213ENST00000524288 GNPTABQ3T906 1256 aa8.49□□□□□ -1.05
SKP1-213ENST00000524288 BAHD1Q8TBE0 780 aaPredicted RBP8.49□□□□□ -1.05
SKP1-213ENST00000524288 KLHL6Q8WZ60 621 aa8.49□□□□□ -1.05
SKP1-213ENST00000524288 CCDC74BQ96LY2 380 aa8.49□□□□□ -1.05
SKP1-213ENST00000524288 SLC6A18Q96N87 628 aa8.49□□□□□ -1.05
SKP1-213ENST00000524288 SLC12A7Q9Y666 1083 aa8.49□□□□□ -1.05
SKP1-213ENST00000524288 TP53P04637 393 aaPredicted RBP8.48□□□□□ -1.05
SKP1-213ENST00000524288 SSRP1Q08945 709 aaKnown RBP8.48□□□□□ -1.05
SKP1-213ENST00000524288 MLANAQ16655 118 aa8.48□□□□□ -1.05
SKP1-213ENST00000524288 INTS3Q68E01 1043 aaKnown RBP8.48□□□□□ -1.05
SKP1-213ENST00000524288 MPZL3Q6UWV2 235 aa8.48□□□□□ -1.05
SKP1-213ENST00000524288 TSPYL5Q86VY4 417 aaPredicted RBP8.48□□□□□ -1.05
SKP1-213ENST00000524288 CREG2Q8IUH2 290 aa8.48□□□□□ -1.05
SKP1-213ENST00000524288 TMEM192Q8IY95 271 aa8.48□□□□□ -1.05
SKP1-213ENST00000524288 LIN37Q96GY3 246 aaPredicted RBP8.48□□□□□ -1.05
SKP1-213ENST00000524288 ZNF512BQ96KM6 892 aaPredicted RBP8.48□□□□□ -1.05
SKP1-213ENST00000524288 PPP1R16BQ96T49 567 aa8.48□□□□□ -1.05
SKP1-213ENST00000524288 RBAK-RBAKDNI3L0D1 243 aa8.47□□□□□ -1.05
SKP1-213ENST00000524288 UBOX5O94941 541 aa8.47□□□□□ -1.05
SKP1-213ENST00000524288 HSD3B2P26439 372 aa8.47□□□□□ -1.05
SKP1-213ENST00000524288 GBP1P32455 592 aa8.47□□□□□ -1.05
SKP1-213ENST00000524288 PPFIBP1Q86W92 1011 aa8.47□□□□□ -1.05
SKP1-213ENST00000524288 PHAXQ9H814 394 aaKnown RBP8.47□□□□□ -1.05
SKP1-213ENST00000524288 DUSP13Q9UII6 198 aa8.47□□□□□ -1.05
SKP1-213ENST00000524288 ENPP3O14638 875 aa8.46□□□□□ -1.06
SKP1-213ENST00000524288 CDC45O75419 566 aa8.46□□□□□ -1.06
SKP1-213ENST00000524288 SLC7A5Q01650 507 aa8.46□□□□□ -1.06
SKP1-213ENST00000524288 SQSTM1Q13501 440 aa8.46□□□□□ -1.06
SKP1-213ENST00000524288 EEPD1Q7L9B9 569 aa8.46□□□□□ -1.06
SKP1-213ENST00000524288 KREMEN1Q96MU8 473 aa8.46□□□□□ -1.06
SKP1-213ENST00000524288 ZMYM5Q9UJ78 669 aa8.46□□□□□ -1.06
SKP1-213ENST00000524288 ZNF214Q9UL59 606 aaPredicted RBP8.46□□□□□ -1.06
SKP1-213ENST00000524288 DNAJC25-GNG10A0A024R161 153 aa8.45□□□□□ -1.06
SKP1-213ENST00000524288 C9IYK1 514 aa8.45□□□□□ -1.06
SKP1-213ENST00000524288 RGS13O14921 159 aa8.45□□□□□ -1.06
SKP1-213ENST00000524288 SUSD5O60279 629 aa8.45□□□□□ -1.06
SKP1-213ENST00000524288 HPXP02790 462 aa8.45□□□□□ -1.06
SKP1-213ENST00000524288 NCAPHQ15003 741 aa8.45□□□□□ -1.06
SKP1-213ENST00000524288 ZNF124Q15973 351 aa8.45□□□□□ -1.06
SKP1-213ENST00000524288 RALGPS1Q5JS13 557 aa8.45□□□□□ -1.06
SKP1-213ENST00000524288 ABHD4Q8TB40 342 aa8.45□□□□□ -1.06
SKP1-213ENST00000524288 PTCH2Q9Y6C5 1203 aa8.45□□□□□ -1.06
SKP1-213ENST00000524288 KRTAP4-8A0A0G2JLE6 195 aa8.44□□□□□ -1.06
SKP1-213ENST00000524288 CLSTN1O94985 981 aa8.44□□□□□ -1.06
SKP1-213ENST00000524288 TSPAN15O95858 294 aa8.44□□□□□ -1.06
SKP1-213ENST00000524288 NCLP19338 710 aaKnown RBP8.44□□□□□ -1.06
SKP1-213ENST00000524288 EGR3Q06889 387 aa8.44□□□□□ -1.06
SKP1-213ENST00000524288 SLC10A6Q3KNW5 377 aa8.44□□□□□ -1.06
SKP1-213ENST00000524288 C2orf27AQ580R0 203 aa8.44□□□□□ -1.06
SKP1-213ENST00000524288 MYLIPQ8WY64 445 aa8.44□□□□□ -1.06
SKP1-213ENST00000524288 APPBP2Q92624 585 aa8.44□□□□□ -1.06
SKP1-213ENST00000524288 LTKP29376 864 aa8.43□□□□□ -1.06
SKP1-213ENST00000524288 RNF4P78317 190 aa8.43□□□□□ -1.06
SKP1-213ENST00000524288 PDZD8Q8NEN9 1154 aa8.43□□□□□ -1.06
SKP1-213ENST00000524288 ST13P5Q8NFI4 369 aaPredicted RBP8.43□□□□□ -1.06
SKP1-213ENST00000524288 SYTL4Q96C24 671 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms