RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 ARHGEF39Q8N4T4 335 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 COG1Q8WTW3 980 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 CAMKK2Q96RR4 588 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 RTFDC1Q9BY42 306 aaPredicted RBP11.36□□□□□ -0.59
PFDN1-207ENST00000524074 TRIM8Q9BZR9 551 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 DISC1Q9NRI5 854 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 MBIPQ9NS73 344 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 CGGBP1Q9UFW8 167 aaPredicted RBP11.36□□□□□ -0.59
PFDN1-207ENST00000524074 NOB1Q9ULX3 412 aaKnown RBP11.36□□□□□ -0.59
PFDN1-207ENST00000524074 AP4E1Q9UPM8 1137 aa11.36□□□□□ -0.59
PFDN1-207ENST00000524074 TCRBV16S1A1N1A0A5B0 115 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 TM4SF5O14894 197 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 SCNN1BP51168 640 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 GAS6Q14393 721 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 TTLL4Q14679 1199 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 SYCP2LQ5T4T6 812 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 FAM102BQ5T8I3 360 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 NBPF12Q5TAG4 269 aaPredicted RBP11.35□□□□□ -0.59
PFDN1-207ENST00000524074 NXNQ6DKJ4 435 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 GTF2IRD2BQ6EKJ0 949 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 GTF2IRD2Q86UP8 949 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 SAMD3Q8N6K7 520 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 XAGE3Q8WTP9 111 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 RB1CC1Q8TDY2 1594 aa11.35□□□□□ -0.59
PFDN1-207ENST00000524074 M0R082 166 aa11.34□□□□□ -0.59
PFDN1-207ENST00000524074 GABRDO14764 452 aa11.34□□□□□ -0.59
PFDN1-207ENST00000524074 SHOXO15266 292 aa11.34□□□□□ -0.59
PFDN1-207ENST00000524074 BPIP17213 487 aa11.34□□□□□ -0.59
PFDN1-207ENST00000524074 GFRA1P56159 465 aa11.34□□□□□ -0.59
PFDN1-207ENST00000524074 SART3Q15020 963 aaKnown RBP11.34□□□□□ -0.59
PFDN1-207ENST00000524074 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
PFDN1-207ENST00000524074 NOL9Q5SY16 702 aaKnown RBP11.34□□□□□ -0.59
PFDN1-207ENST00000524074 PIK3R6Q5UE93 754 aa11.34□□□□□ -0.59
PFDN1-207ENST00000524074 FOXD4L3Q6VB84 417 aaPredicted RBP11.34□□□□□ -0.59
PFDN1-207ENST00000524074 ZNF417Q8TAU3 575 aa11.34□□□□□ -0.59
PFDN1-207ENST00000524074 CCDC140Q96MF4 163 aa11.34□□□□□ -0.59
PFDN1-207ENST00000524074 ZNF587Q96SQ5 575 aaPredicted RBP11.34□□□□□ -0.59
PFDN1-207ENST00000524074 SSU72Q9NP77 194 aaKnown RBP11.34□□□□□ -0.59
PFDN1-207ENST00000524074 APBA3O96018 575 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 NEFMP07197 916 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 SNRPB2P08579 225 aaKnown RBP11.33□□□□□ -0.6
PFDN1-207ENST00000524074 SAFB2Q14151 953 aaKnown RBP eCLIP11.33□□□□□ -0.6
PFDN1-207ENST00000524074 KSR2Q6VAB6 950 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 ANKLE2Q86XL3 938 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 BRF1Q92994 677 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 WNK4Q96J92 1243 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 FOXQ1Q9C009 403 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 PIDD1Q9HB75 910 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 FBXL21Q9UKT6 434 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 PCDHB12Q9Y5F1 795 aa11.33□□□□□ -0.6
PFDN1-207ENST00000524074 A0A087WZG4 1122 aa11.32□□□□□ -0.6
PFDN1-207ENST00000524074 RNGTTO60942 597 aaKnown RBP11.32□□□□□ -0.6
PFDN1-207ENST00000524074 HOXC12P31275 282 aa11.32□□□□□ -0.6
PFDN1-207ENST00000524074 ID4P47928 161 aa11.32□□□□□ -0.6
PFDN1-207ENST00000524074 SF1Q15637 639 aaKnown RBP11.32□□□□□ -0.6
PFDN1-207ENST00000524074 NTRK3Q16288 839 aa11.32□□□□□ -0.6
PFDN1-207ENST00000524074 GFOD2Q3B7J2 385 aa11.32□□□□□ -0.6
PFDN1-207ENST00000524074 ZCCHC8Q6NZY4 707 aaKnown RBP11.32□□□□□ -0.6
PFDN1-207ENST00000524074 UBE3DQ7Z6J8 389 aa11.32□□□□□ -0.6
PFDN1-207ENST00000524074 UBASH3BQ8TF42 649 aa11.32□□□□□ -0.6
PFDN1-207ENST00000524074 AQP7O14520 342 aa11.31□□□□□ -0.6
PFDN1-207ENST00000524074 FBXO21O94952 628 aa11.31□□□□□ -0.6
PFDN1-207ENST00000524074 CRTAMO95727 393 aa11.31□□□□□ -0.6
PFDN1-207ENST00000524074 LDHAP00338 332 aaKnown RBP11.31□□□□□ -0.6
PFDN1-207ENST00000524074 EPXP11678 715 aa11.31□□□□□ -0.6
PFDN1-207ENST00000524074 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
PFDN1-207ENST00000524074 TMED8Q6PL24 325 aaPredicted RBP11.31□□□□□ -0.6
PFDN1-207ENST00000524074 C8orf86Q6ZUL3 223 aa11.31□□□□□ -0.6
PFDN1-207ENST00000524074 USP53Q70EK8 1073 aa11.31□□□□□ -0.6
PFDN1-207ENST00000524074 DDX53Q86TM3 631 aaKnown RBP11.31□□□□□ -0.6
PFDN1-207ENST00000524074 MAGEB6Q8N7X4 407 aa11.31□□□□□ -0.6
PFDN1-207ENST00000524074 TMEM145Q8NBT3 493 aa11.31□□□□□ -0.6
PFDN1-207ENST00000524074 NOL6Q9H6R4 1146 aaKnown RBP11.31□□□□□ -0.6
PFDN1-207ENST00000524074 LUC7LQ9NQ29 371 aaKnown RBP11.31□□□□□ -0.6
PFDN1-207ENST00000524074 KCNK4Q9NYG8 393 aa11.31□□□□□ -0.6
PFDN1-207ENST00000524074 TRAF6Q9Y4K3 522 aa11.31□□□□□ -0.6
PFDN1-207ENST00000524074 RFPL1O75677 317 aa11.3□□□□□ -0.6
PFDN1-207ENST00000524074 ZNF445P59923 1031 aa11.3□□□□□ -0.6
PFDN1-207ENST00000524074 PPP2R5DQ14738 602 aa11.3□□□□□ -0.6
PFDN1-207ENST00000524074 DUOXA2Q1HG44 320 aa11.3□□□□□ -0.6
PFDN1-207ENST00000524074 IQSEC1Q6DN90 963 aa11.3□□□□□ -0.6
PFDN1-207ENST00000524074 PPP1R13LQ8WUF5 828 aa11.3□□□□□ -0.6
PFDN1-207ENST00000524074 JPH3Q8WXH2 748 aaPredicted RBP11.3□□□□□ -0.6
PFDN1-207ENST00000524074 ISL2Q96A47 359 aa11.3□□□□□ -0.6
PFDN1-207ENST00000524074 KREMEN1Q96MU8 473 aa11.3□□□□□ -0.6
PFDN1-207ENST00000524074 NKX2-4Q9H2Z4 354 aa11.3□□□□□ -0.6
PFDN1-207ENST00000524074 FHOD1Q9Y613 1164 aa11.3□□□□□ -0.6
PFDN1-207ENST00000524074 CPP00450 1065 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 CT47B1P0C2W7 299 aaPredicted RBP11.29□□□□□ -0.6
PFDN1-207ENST00000524074 ADH5P11766 374 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 NAT1P18440 290 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 ECI1P42126 302 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 IL2P60568 153 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 GRB10Q13322 594 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 NBPF9Q3BBW0 867 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 NUTM2GQ5VZR2 741 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
PFDN1-207ENST00000524074 MFSD2AQ8NA29 543 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 TMPRSS13Q9BYE2 586 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms