RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 RGS22Q8NE09 1264 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 IGDCC4Q8TDY8 1250 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 SYAP1Q96A49 352 aaPredicted RBP8□□□□□ -1.13
CSMD1-211ENST00000523062 UBAC1Q9BSL1 405 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 COA1Q9GZY4 146 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 ZSCAN16Q9H4T2 348 aaPredicted RBP8□□□□□ -1.13
CSMD1-211ENST00000523062 LY9Q9HBG7 655 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 JAG2Q9Y219 1238 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 TACC3Q9Y6A5 838 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 MROH7-TTC4A0A0A0MT08 1334 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 FAM205AQ6ZU69 1335 aa8□□□□□ -1.13
CSMD1-211ENST00000523062 ZBTB43O43298 467 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 ORC4O43929 436 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 DTNBO60941 627 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 UBE2HP62256 183 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 DNM1Q05193 864 aaKnown RBP7.99□□□□□ -1.13
CSMD1-211ENST00000523062 DHX9Q08211 1270 aaKnown RBP7.99□□□□□ -1.13
CSMD1-211ENST00000523062 WTAPQ15007 396 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 SBK1Q52WX2 424 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 CAVIN1Q6NZI2 390 aaKnown RBP7.99□□□□□ -1.13
CSMD1-211ENST00000523062 CTR9Q6PD62 1173 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 DPP8Q6V1X1 898 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-211ENST00000523062 FERMT3Q86UX7 667 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 C2CD5Q86YS7 1000 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 AMOTL1Q8IY63 956 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 GPT2Q8TD30 523 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 EYA3Q99504 573 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 DCP1AQ9NPI6 582 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-211ENST00000523062 ZSWIM5Q9P217 1185 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 ORC3Q9UBD5 711 aaPredicted RBP7.99□□□□□ -1.13
CSMD1-211ENST00000523062 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.99□□□□□ -1.13
CSMD1-211ENST00000523062 SUGT1Q9Y2Z0 365 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 SLC12A7Q9Y666 1083 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 LAMB1P07942 1786 aa7.99□□□□□ -1.13
CSMD1-211ENST00000523062 USP17L12C9JPN9 530 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 USP17L21D6R901 530 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 H0YIN7 160 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 FGRP09769 529 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 USP5P45974 858 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 ZNF445P59923 1031 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 RELBQ01201 579 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 PDE4BQ07343 736 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 DIXDC1Q155Q3 683 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 MFSD14BQ5SR56 506 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 MICU3Q86XE3 530 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 RAB11FIP4Q86YS3 637 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 ZNF622Q969S3 477 aaKnown RBP eCLIP7.98□□□□□ -1.13
CSMD1-211ENST00000523062 C8orf76Q96K31 380 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 RTFDC1Q9BY42 306 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-211ENST00000523062 ZC3H12CQ9C0D7 883 aaKnown RBP7.98□□□□□ -1.13
CSMD1-211ENST00000523062 SCAND2PQ9GZW5 306 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-211ENST00000523062 GDPD2Q9HCC8 539 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 INCENPQ9NQS7 918 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 ELP1O95163 1332 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 STK36Q9NRP7 1315 aa7.98□□□□□ -1.13
CSMD1-211ENST00000523062 ROBO3Q96MS0 1386 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 CYP2D7A0A087X1C5 515 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 GPR75-ASB3A0A0A6YYF3 556 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 CCDC196A0A1B0GTZ2 297 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 GADD45BO75293 160 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-211ENST00000523062 FDPSP14324 419 aaKnown RBP7.97□□□□□ -1.13
CSMD1-211ENST00000523062 BTDP43251 543 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 MRE11P49959 708 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 SEC23AQ15436 765 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 RTN1Q16799 776 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 ZSCAN23Q3MJ62 389 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 ATL3Q6DD88 541 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 IQCA1Q86XH1 822 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 SH3RF3Q8TEJ3 882 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-211ENST00000523062 WASF1Q92558 559 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 CNKSR1Q969H4 720 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 ACDQ96AP0 544 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 ZNF396Q96N95 335 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-211ENST00000523062 MCM9Q9NXL9 1143 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 GAKO14976 1311 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 TNKSO95271 1327 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 EP400Q96L91 3159 aa7.97□□□□□ -1.13
CSMD1-211ENST00000523062 C10orf71Q711Q0 1435 aa7.96□□□□□ -1.13
CSMD1-211ENST00000523062 NAV1Q8NEY1 1877 aa7.96□□□□□ -1.13
CSMD1-211ENST00000523062 BAZ2AQ9UIF9 1905 aaKnown RBP7.96□□□□□ -1.13
CSMD1-211ENST00000523062 RANBP6O60518 1105 aaKnown RBP7.96□□□□□ -1.14
CSMD1-211ENST00000523062 DDAH1O94760 285 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 CYP2D6P10635 497 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 IFNAR1P17181 557 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 IARSP41252 1262 aaKnown RBP7.96□□□□□ -1.14
CSMD1-211ENST00000523062 GTF2IP78347 998 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 TTLL12Q14166 644 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-211ENST00000523062 PPP2R5BQ15173 497 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 GRIK5Q16478 980 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 AMHR2Q16671 573 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 CCDC178Q5BJE1 867 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 CCDC183Q5T5S1 534 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 CC2D2BQ6DHV5 1058 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 BRAPQ7Z569 592 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 TEX11Q8IYF3 940 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 ZNF654Q8IZM8 581 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 STK11IPQ8N1F8 1099 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 SPATA32Q96LK8 384 aa7.96□□□□□ -1.14
CSMD1-211ENST00000523062 ZSCAN10Q96SZ4 725 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-211ENST00000523062 ZKSCAN3Q9BRR0 538 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms