RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SNRNP48Q6IEG0 339 aaKnown RBP22.15■■□□□ 1.14
SPIDR-220ENST00000522900 CWC27Q6UX04 472 aaKnown RBP22.15■■□□□ 1.14
SPIDR-220ENST00000522900 CPXCR1Q8N123 301 aa22.15■■□□□ 1.14
SPIDR-220ENST00000522900 MAML3Q96JK9 1138 aa22.15■■□□□ 1.14
SPIDR-220ENST00000522900 FEM1BQ9UK73 627 aa22.15■■□□□ 1.14
SPIDR-220ENST00000522900 STX8Q9UNK0 236 aa22.15■■□□□ 1.14
SPIDR-220ENST00000522900 ZBED4O75132 1171 aa22.14■■□□□ 1.13
SPIDR-220ENST00000522900 RRP12Q5JTH9 1297 aaKnown RBP22.14■■□□□ 1.13
SPIDR-220ENST00000522900 RASGRP2Q7LDG7 609 aa22.14■■□□□ 1.13
SPIDR-220ENST00000522900 TEX13BQ9BXU2 312 aa22.14■■□□□ 1.13
SPIDR-220ENST00000522900 SLC38A10Q9HBR0 1119 aa22.14■■□□□ 1.13
SPIDR-220ENST00000522900 RAVER2Q9HCJ3 691 aaKnown RBP22.14■■□□□ 1.13
SPIDR-220ENST00000522900 TOMM22Q9NS69 142 aa22.14■■□□□ 1.13
SPIDR-220ENST00000522900 SLC5A4Q9NY91 659 aa22.14■■□□□ 1.13
SPIDR-220ENST00000522900 DDX20Q9UHI6 824 aaKnown RBP22.14■■□□□ 1.13
SPIDR-220ENST00000522900 PFASO15067 1338 aa22.13■■□□□ 1.13
SPIDR-220ENST00000522900 TMEM232C9JQI7 657 aa22.13■■□□□ 1.13
SPIDR-220ENST00000522900 NOVP48745 357 aa22.13■■□□□ 1.13
SPIDR-220ENST00000522900 KCTD2Q14681 263 aa22.13■■□□□ 1.13
SPIDR-220ENST00000522900 ZNF792Q3KQV3 632 aa22.13■■□□□ 1.13
SPIDR-220ENST00000522900 GMCL1Q96IK5 515 aa22.13■■□□□ 1.13
SPIDR-220ENST00000522900 NR2E3Q9Y5X4 410 aa22.13■■□□□ 1.13
SPIDR-220ENST00000522900 COL11A1P12107 1806 aaPredicted RBP22.13■■□□□ 1.13
SPIDR-220ENST00000522900 ZNF236Q9UL36 1845 aa22.13■■□□□ 1.13
SPIDR-220ENST00000522900 ATP2A1O14983 1001 aa22.12■■□□□ 1.13
SPIDR-220ENST00000522900 COL6A1P12109 1028 aa22.12■■□□□ 1.13
SPIDR-220ENST00000522900 ANO1Q5XXA6 986 aa22.12■■□□□ 1.13
SPIDR-220ENST00000522900 CHRDL2Q6WN34 429 aa22.12■■□□□ 1.13
SPIDR-220ENST00000522900 DIAPH3Q9NSV4 1193 aa22.12■■□□□ 1.13
SPIDR-220ENST00000522900 ISY1Q9ULR0 285 aaKnown RBP22.12■■□□□ 1.13
SPIDR-220ENST00000522900 ZMYM6O95789 1325 aa22.11■■□□□ 1.13
SPIDR-220ENST00000522900 COPB2P35606 906 aa22.11■■□□□ 1.13
SPIDR-220ENST00000522900 SLC1A4P43007 532 aa22.11■■□□□ 1.13
SPIDR-220ENST00000522900 KCTD1Q719H9 257 aa22.11■■□□□ 1.13
SPIDR-220ENST00000522900 TBC1D10CQ8IV04 446 aa22.11■■□□□ 1.13
SPIDR-220ENST00000522900 MTMR7Q9Y216 660 aa22.11■■□□□ 1.13
SPIDR-220ENST00000522900 CTDP1Q9Y5B0 961 aaPredicted RBP22.11■■□□□ 1.13
SPIDR-220ENST00000522900 MYH4Q9Y623 1939 aa22.1■■□□□ 1.13
SPIDR-220ENST00000522900 MFAP1P55081 439 aaKnown RBP22.1■■□□□ 1.13
SPIDR-220ENST00000522900 RCSD1Q6JBY9 416 aa22.1■■□□□ 1.13
SPIDR-220ENST00000522900 C7orf61Q8IZ16 206 aa22.1■■□□□ 1.13
SPIDR-220ENST00000522900 STAG1Q8WVM7 1258 aa22.1■■□□□ 1.13
SPIDR-220ENST00000522900 MSCO60682 206 aa22.09■■□□□ 1.13
SPIDR-220ENST00000522900 GSPT1P15170 499 aaKnown RBP22.09■■□□□ 1.13
SPIDR-220ENST00000522900 TAL1P17542 331 aaPredicted RBP22.09■■□□□ 1.13
SPIDR-220ENST00000522900 SNAP25P60880 206 aa22.09■■□□□ 1.13
SPIDR-220ENST00000522900 PPP4R3BQ5MIZ7 849 aa22.09■■□□□ 1.13
SPIDR-220ENST00000522900 AKNAD1Q5T1N1 836 aa22.09■■□□□ 1.13
SPIDR-220ENST00000522900 CHURC1Q8WUH1 139 aa22.09■■□□□ 1.13
SPIDR-220ENST00000522900 IL25Q9H293 177 aa22.09■■□□□ 1.13
SPIDR-220ENST00000522900 DIS3Q9Y2L1 958 aaKnown RBP22.09■■□□□ 1.13
SPIDR-220ENST00000522900 SEPT4O43236 478 aa22.08■■□□□ 1.13
SPIDR-220ENST00000522900 STAT2P52630 851 aa22.08■■□□□ 1.13
SPIDR-220ENST00000522900 IKQ13123 557 aaPredicted RBP22.08■■□□□ 1.13
SPIDR-220ENST00000522900 TTC22Q5TAA0 569 aa22.08■■□□□ 1.13
SPIDR-220ENST00000522900 MFSD6Q6ZSS7 791 aa22.08■■□□□ 1.13
SPIDR-220ENST00000522900 FAM160B2Q86V87 743 aa22.08■■□□□ 1.13
SPIDR-220ENST00000522900 DDX11Q96FC9 970 aa22.08■■□□□ 1.13
SPIDR-220ENST00000522900 AGBL1Q96MI9 1066 aa22.08■■□□□ 1.13
SPIDR-220ENST00000522900 TMEM47Q9BQJ4 181 aa22.08■■□□□ 1.13
SPIDR-220ENST00000522900 TINF2Q9BSI4 451 aa22.08■■□□□ 1.13
SPIDR-220ENST00000522900 TCP11L1Q9NUJ3 509 aa22.08■■□□□ 1.13
SPIDR-220ENST00000522900 RBM27Q9P2N5 1060 aaKnown RBP22.08■■□□□ 1.13
SPIDR-220ENST00000522900 ZNF536O15090 1300 aa22.07■■□□□ 1.12
SPIDR-220ENST00000522900 DNAJC25-GNG10A0A024R161 153 aa22.07■■□□□ 1.12
SPIDR-220ENST00000522900 HIP1O00291 1037 aa22.07■■□□□ 1.12
SPIDR-220ENST00000522900 OAZ1P54368 228 aa22.07■■□□□ 1.12
SPIDR-220ENST00000522900 LRRC26Q2I0M4 334 aa22.07■■□□□ 1.12
SPIDR-220ENST00000522900 HOMER2Q9NSB8 354 aa22.07■■□□□ 1.12
SPIDR-220ENST00000522900 PCDH10Q9P2E7 1040 aa22.07■■□□□ 1.12
SPIDR-220ENST00000522900 ZMYND8Q9ULU4 1186 aaPredicted RBP22.07■■□□□ 1.12
SPIDR-220ENST00000522900 NEDD4P46934 1319 aa22.06■■□□□ 1.12
SPIDR-220ENST00000522900 ZNF213O14771 459 aa22.06■■□□□ 1.12
SPIDR-220ENST00000522900 PLA2G6O60733 806 aa22.06■■□□□ 1.12
SPIDR-220ENST00000522900 GJC2Q5T442 439 aaPredicted RBP22.06■■□□□ 1.12
SPIDR-220ENST00000522900 TTBK2Q6IQ55 1244 aa22.06■■□□□ 1.12
SPIDR-220ENST00000522900 SENP6Q9GZR1 1112 aaPredicted RBP22.06■■□□□ 1.12
SPIDR-220ENST00000522900 PRO3102Q9H379 93 aa22.06■■□□□ 1.12
SPIDR-220ENST00000522900 PRR12Q9ULL5 1215 aa22.06■■□□□ 1.12
SPIDR-220ENST00000522900 FDX1P10109 184 aa22.05■■□□□ 1.12
SPIDR-220ENST00000522900 TOP1P11387 765 aaKnown RBP22.05■■□□□ 1.12
SPIDR-220ENST00000522900 SLC16A2P36021 539 aa22.05■■□□□ 1.12
SPIDR-220ENST00000522900 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.05■■□□□ 1.12
SPIDR-220ENST00000522900 CHST13Q8NET6 341 aa22.05■■□□□ 1.12
SPIDR-220ENST00000522900 DCAF4Q8WV16 495 aa22.05■■□□□ 1.12
SPIDR-220ENST00000522900 ZKSCAN3Q9BRR0 538 aa22.05■■□□□ 1.12
SPIDR-220ENST00000522900 ALPK3Q96L96 1907 aa22.04■■□□□ 1.12
SPIDR-220ENST00000522900 ZNF865P0CJ78 1059 aaPredicted RBP22.04■■□□□ 1.12
SPIDR-220ENST00000522900 SYN1P17600 705 aa22.04■■□□□ 1.12
SPIDR-220ENST00000522900 CCDC96Q2M329 555 aa22.04■■□□□ 1.12
SPIDR-220ENST00000522900 CCDC174Q6PII3 467 aa22.04■■□□□ 1.12
SPIDR-220ENST00000522900 ANKRD35Q8N283 1001 aa22.04■■□□□ 1.12
SPIDR-220ENST00000522900 FGD4Q96M96 766 aa22.04■■□□□ 1.12
SPIDR-220ENST00000522900 DSCC1Q9BVC3 393 aa22.04■■□□□ 1.12
SPIDR-220ENST00000522900 ZNFX1Q9P2E3 1918 aaKnown RBP22.04■■□□□ 1.12
SPIDR-220ENST00000522900 FRMPD2Q68DX3 1309 aaPredicted RBP22.04■■□□□ 1.12
SPIDR-220ENST00000522900 CEP290O15078 2479 aa22.03■■□□□ 1.12
SPIDR-220ENST00000522900 DNM1LO00429 736 aa22.03■■□□□ 1.12
SPIDR-220ENST00000522900 SNAI1O95863 264 aaPredicted RBP22.03■■□□□ 1.12
SPIDR-220ENST00000522900 MYCNP04198 464 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms