RNA–Protein interactions for RNA: ENST00000522878.5

ARFGEF1-208, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-208ENST00000522878 COL11A1P12107 1806 aaPredicted RBP6.85□□□□□ -1.31
ARFGEF1-208ENST00000522878 SCAMP3O14828 347 aaKnown RBP6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 WFS1O76024 890 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 CYP2C8P10632 490 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 DMWDQ09019 674 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 RSPO4Q2I0M5 234 aaPredicted RBP6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 SLC10A5Q5PT55 438 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 TMEM240Q5SV17 173 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 DACT2Q5SW24 774 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 SLC39A5Q6ZMH5 540 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 PRIMPOLQ96LW4 560 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 EYA3Q99504 573 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 BACH2Q9BYV9 841 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 BSDC1Q9NW68 430 aaPredicted RBP6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 STK17AQ9UEE5 414 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 PCDHB9Q9Y5E1 797 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 POLQO75417 2590 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 DOPEY2Q9Y3R5 2298 aa6.84□□□□□ -1.31
ARFGEF1-208ENST00000522878 ANKRD62A6NC57 917 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 KIAA0355O15063 1070 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 CCND3P30281 292 aaPredicted RBP6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 SEC13P55735 322 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 CLDN10P78369 228 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 PTK2Q05397 1052 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 PPIL2Q13356 520 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 KIAA0319Q5VV43 1072 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 MCTP2Q6DN12 878 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 ERO1BQ86YB8 467 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 CRIPAKQ8N1N5 446 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 PARK7Q99497 189 aaKnown RBP6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 USP16Q9Y5T5 823 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 SPEF2Q9C093 1822 aa6.83□□□□□ -1.32
ARFGEF1-208ENST00000522878 NBPF19A0A087WUL8 3843 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 LPXNO60711 386 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 MYOGP15173 224 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 GPTP24298 496 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 GPAT2Q6NUI2 795 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 ZNF790Q6PG37 636 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 PHTF2Q8N3S3 785 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 GTF3C2Q8WUA4 911 aaPredicted RBP6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 COA7Q96BR5 231 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 GPSM3Q9Y4H4 160 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 PCDHAC2Q9Y5I4 1007 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 CACNA1IQ9P0X4 2223 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 ZNF236Q9UL36 1845 aa6.82□□□□□ -1.32
ARFGEF1-208ENST00000522878 RALGAPA1Q6GYQ0 2036 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 SHROOM3Q8TF72 1996 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 DNM1LO00429 736 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 KCNA5P22460 613 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 ATXN1P54253 815 aaKnown RBP6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 CACNB2Q08289 660 aaPredicted RBP6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 RASA3Q14644 834 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 OCLNQ16625 522 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 KMT5BQ4FZB7 885 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 SOWAHCQ53LP3 525 aaPredicted RBP6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 PLA2G2CQ5R387 149 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 C1orf53Q5VUE5 145 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 DPH6Q7L8W6 267 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 ADHFE1Q8IWW8 467 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 RGL4Q8IZJ4 473 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 TTC5Q8N0Z6 440 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 SIX5Q8N196 739 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 TEPSINQ96N21 525 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 ZC3H12CQ9C0D7 883 aaKnown RBP6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 PRKAG3Q9UGI9 489 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 CSADQ9Y600 493 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 ZFHX3Q15911 3703 aa6.81□□□□□ -1.32
ARFGEF1-208ENST00000522878 DNHD1Q96M86 4753 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 ZNF521Q96K83 1311 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 TICRRQ7Z2Z1 1910 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 MMP14P50281 582 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 HDLBPQ00341 1268 aaKnown RBP6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 TLE2Q04725 743 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 ZNF34Q8IZ26 560 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 PIK3R5Q8WYR1 880 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 ASIC4Q96FT7 647 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 UPF3BQ9BZI7 483 aaKnown RBP6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 TANGO6Q9C0B7 1094 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 GMPR2Q9P2T1 348 aaKnown RBP6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 TET1Q8NFU7 2136 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 NAV3Q8IVL0 2385 aa6.8□□□□□ -1.32
ARFGEF1-208ENST00000522878 SCN5AQ14524 2016 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 TNKSO95271 1327 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 SH3TC1Q8TE82 1336 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 CLRN2A0PK11 232 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 F12P00748 615 aaPredicted RBP6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 PROS1P07225 676 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 CLTBP09497 229 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 RAG1P15918 1043 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 CTHP32929 405 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 RABGGTBP53611 331 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 GTF2IP78347 998 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 RING1Q06587 406 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 FOXC1Q12948 553 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 NFX1Q12986 1120 aaKnown RBP6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 MRPL58Q14197 206 aaKnown RBP6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 EPHA10Q5JZY3 1008 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 MORN1Q5T089 497 aa6.79□□□□□ -1.32
ARFGEF1-208ENST00000522878 GIMAP6Q6P9H5 292 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms