RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 C1orf74Q96LT6 269 aa9.18□□□□□ -0.94
HMGB4-204ENST00000522796 UPF3BQ9BZI7 483 aaKnown RBP9.18□□□□□ -0.94
HMGB4-204ENST00000522796 DDX19AQ9NUU7 478 aaKnown RBP9.18□□□□□ -0.94
HMGB4-204ENST00000522796 DKK3Q9UBP4 350 aa9.18□□□□□ -0.94
HMGB4-204ENST00000522796 R3HDM2Q9Y2K5 976 aaKnown RBP9.18□□□□□ -0.94
HMGB4-204ENST00000522796 NPHP3Q7Z494 1330 aa9.18□□□□□ -0.94
HMGB4-204ENST00000522796 HTR3EA5X5Y0 456 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 TRIM43BA6NCK2 446 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 APAF1O14727 1248 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 CUTAO60888 179 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 S100A5P33763 92 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 GSTM4Q03013 218 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 SULT2A1Q06520 285 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 CAMK2BQ13554 666 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 MAP7Q14244 749 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 SUZ12Q15022 739 aaKnown RBP9.17□□□□□ -0.94
HMGB4-204ENST00000522796 CFAP157Q5JU67 520 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 NAA35Q5VZE5 725 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 ARMCX5Q6P1M9 558 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 VPS52Q8N1B4 723 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 P3H4Q92791 437 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 ABHD8Q96I13 439 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 PUS3Q9BZE2 481 aaKnown RBP9.17□□□□□ -0.94
HMGB4-204ENST00000522796 DNAJC25Q9H1X3 360 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.17□□□□□ -0.94
HMGB4-204ENST00000522796 ZNF148Q9UQR1 794 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 SQORQ9Y6N5 450 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 SRRM3A6NNA2 597 aaPredicted RBP9.17□□□□□ -0.94
HMGB4-204ENST00000522796 MGEA5O60502 916 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 CCNG1P51959 295 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 POLR2FP61218 127 aaKnown RBP9.17□□□□□ -0.94
HMGB4-204ENST00000522796 ELF3P78545 371 aaPredicted RBP9.17□□□□□ -0.94
HMGB4-204ENST00000522796 BOLA3Q53S33 107 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 ARL6IP6Q8N6S5 226 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 LINC00469Q8N7U9 141 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 APPL2Q8NEU8 664 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 SVIPQ8NHG7 77 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 DDX27Q96GQ7 796 aaKnown RBP9.17□□□□□ -0.94
HMGB4-204ENST00000522796 VCX3AQ9NNX9 186 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 KMT5AQ9NQR1 393 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 RHBDL2Q9NX52 303 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 LUC7L2Q9Y383 392 aaKnown RBP9.17□□□□□ -0.94
HMGB4-204ENST00000522796 TOPBP1Q92547 1522 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 RGS12O14924 1447 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 PIK3C2GO75747 1445 aa9.17□□□□□ -0.94
HMGB4-204ENST00000522796 VWA3AA6NCI4 1184 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 TTI1O43156 1089 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 FLOT1O75955 427 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 F13A1P00488 732 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 MAN1A1P33908 653 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 CCT6AP40227 531 aaKnown RBP9.16□□□□□ -0.94
HMGB4-204ENST00000522796 CD97P48960 835 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 FAM69CQ0P6D2 419 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 ZBTB17Q13105 803 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
HMGB4-204ENST00000522796 STIM1Q13586 685 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 LACTB2Q53H82 288 aaPredicted RBP9.16□□□□□ -0.94
HMGB4-204ENST00000522796 CEP128Q6ZU80 1094 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 C11orf74Q86VG3 221 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 ACMSDQ8TDX5 336 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 ATP6V0A1Q93050 837 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 DHX58Q96C10 678 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 EIF2AQ9BY44 585 aaKnown RBP9.16□□□□□ -0.94
HMGB4-204ENST00000522796 RABEP2Q9H5N1 569 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 BAIAP2L1Q9UHR4 511 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 MYPNQ86TC9 1320 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 PDS5BQ9NTI5 1447 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 WDR62O43379 1518 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 ST20-MTHFSA0A0A6YYL1 179 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 SPDYE5A6NIY4 337 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 GOLGA8KD6RF30 607 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 BTF3P20290 206 aaKnown RBP9.16□□□□□ -0.94
HMGB4-204ENST00000522796 TSPAN7P41732 249 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 STAT6P42226 847 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 NEK4P51957 841 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 PMS2P54278 862 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 POLE2P56282 527 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 ITGA7Q13683 1181 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 PTPROQ16827 1216 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 ANKRD20A8PQ5CZ79 823 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 ZNF554Q86TJ5 538 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 CNBD1Q8NA66 436 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 KIFAP3Q92845 792 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 TTC14Q96N46 770 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 CTAGE1Q96RT6 745 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 SMC6Q96SB8 1091 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 HAUS7Q99871 368 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 EPN3Q9H201 632 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 BHMT2Q9H2M3 363 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 CLSTN2Q9H4D0 955 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMGB4-204ENST00000522796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMGB4-204ENST00000522796 SLAIN2Q9P270 581 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 CEP131Q9UPN4 1083 aa9.16□□□□□ -0.94
HMGB4-204ENST00000522796 OPLAHO14841 1288 aa9.15□□□□□ -0.94
HMGB4-204ENST00000522796 USO1O60763 962 aaKnown RBP9.15□□□□□ -0.94
HMGB4-204ENST00000522796 SUPT3HO75486 399 aa9.15□□□□□ -0.94
HMGB4-204ENST00000522796 KIF5AQ12840 1032 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms