RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 SNRNP48Q6IEG0 339 aaKnown RBP16.79■□□□□ 0.28
HMBOX1-209ENST00000522468 CLIP2Q9UDT6 1046 aa16.79■□□□□ 0.28
HMBOX1-209ENST00000522468 PHF24Q9UPV7 400 aa16.79■□□□□ 0.28
HMBOX1-209ENST00000522468 ERC2O15083 957 aa16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 RAD21O60216 631 aa16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 ADCYAP1R1P41586 468 aa16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 LRRFIP1Q32MZ4 808 aaKnown RBP16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 MAMDC4Q6UXC1 1216 aa16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 Q7L0L9 218 aa16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 MSL3Q8N5Y2 521 aaKnown RBP16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 DEFB123Q8N688 67 aa16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 GMCL1P1Q8NEA9 526 aa16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 NEDD1Q8NHV4 660 aa16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 SLC38A10Q9HBR0 1119 aa16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 ZNF287Q9HBT7 754 aa16.78■□□□□ 0.28
HMBOX1-209ENST00000522468 TTLL1O95922 423 aa16.77■□□□□ 0.28
HMBOX1-209ENST00000522468 APPP05067 770 aa16.77■□□□□ 0.28
HMBOX1-209ENST00000522468 MX1P20591 662 aa16.77■□□□□ 0.28
HMBOX1-209ENST00000522468 TRIM60Q495X7 471 aa16.77■□□□□ 0.28
HMBOX1-209ENST00000522468 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.28
HMBOX1-209ENST00000522468 FGD4Q96M96 766 aa16.77■□□□□ 0.28
HMBOX1-209ENST00000522468 XPNPEP3Q9NQH7 507 aa16.77■□□□□ 0.28
HMBOX1-209ENST00000522468 PDLIM7Q9NR12 457 aa16.77■□□□□ 0.28
HMBOX1-209ENST00000522468 MTMR10Q9NXD2 777 aa16.77■□□□□ 0.28
HMBOX1-209ENST00000522468 ATP11BQ9Y2G3 1177 aa16.77■□□□□ 0.28
HMBOX1-209ENST00000522468 SYNGAP1Q96PV0 1343 aa16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 ADAMTS4O75173 837 aa16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 SNAI1O95863 264 aaPredicted RBP16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 RARBP10826 455 aa16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 RRP1P56182 461 aaKnown RBP16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 PPARAQ07869 468 aa16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 LRRC47Q8N1G4 583 aaKnown RBP16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 FERMT2Q96AC1 680 aa16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 LENG1Q96BZ8 264 aaPredicted RBP16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 LBHD1Q9BQE6 289 aaPredicted RBP16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 FSD1Q9BTV5 496 aa16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 NACAP1Q9BZK3 213 aa16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 PRUNE2Q8WUY3 3088 aa16.76■□□□□ 0.27
HMBOX1-209ENST00000522468 VCANP13611 3396 aa16.75■□□□□ 0.27
HMBOX1-209ENST00000522468 POTEB2H3BUK9 544 aa16.75■□□□□ 0.27
HMBOX1-209ENST00000522468 PGK1P00558 417 aa16.75■□□□□ 0.27
HMBOX1-209ENST00000522468 AKR1A1P14550 325 aa16.75■□□□□ 0.27
HMBOX1-209ENST00000522468 OAZ1P54368 228 aa16.75■□□□□ 0.27
HMBOX1-209ENST00000522468 SH3RF1Q7Z6J0 888 aa16.75■□□□□ 0.27
HMBOX1-209ENST00000522468 ZNF467Q7Z7K2 595 aaPredicted RBP16.75■□□□□ 0.27
HMBOX1-209ENST00000522468 FEM1BQ9UK73 627 aa16.75■□□□□ 0.27
HMBOX1-209ENST00000522468 TACC3Q9Y6A5 838 aa16.75■□□□□ 0.27
HMBOX1-209ENST00000522468 TRIM43BA6NCK2 446 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 ZBED4O75132 1171 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 TSPY3P0CV98 308 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 TSPY8P0CW00 308 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 TFAP4Q01664 338 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 PDE4BQ07343 736 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 SLFN13Q68D06 897 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 FAM109BQ6ICB4 259 aaPredicted RBP16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 CCSAPQ6IQ19 270 aaPredicted RBP16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 CPXCR1Q8N123 301 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 KLHDC9Q8NEP7 349 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 KIFC2Q96AC6 838 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 TRIM43Q96BQ3 446 aaPredicted RBP16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 NAPBQ9H115 298 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 RAVER2Q9HCJ3 691 aaKnown RBP16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 IL17RBQ9NRM6 502 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 PRKAG2Q9UGJ0 569 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 CNPY2Q9Y2B0 182 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 LCTP09848 1927 aa16.74■□□□□ 0.27
HMBOX1-209ENST00000522468 LRRC37A2A6NM11 1700 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 ZNF536O15090 1300 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 SYNRGQ9UMZ2 1314 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 A0A1W2PQ45 241 aaPredicted RBP16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 A0A1W2PQY0 241 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 ADCY6O43306 1168 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 BMP3P12645 472 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 ITGB8P26012 769 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 NOVP48745 357 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 TLE2Q04725 743 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 RNF180Q86T96 592 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 CHST13Q8NET6 341 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 GMCL1Q96IK5 515 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 KATNBL1Q9H079 304 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 STXBP5LQ9Y2K9 1186 aa16.73■□□□□ 0.27
HMBOX1-209ENST00000522468 PLA2G6O60733 806 aa16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 FGRP09769 529 aa16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 FDX1P10109 184 aa16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 C9orf50Q5SZB4 431 aa16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 VPS53Q5VIR6 699 aa16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 BADQ92934 168 aa16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 DDX11Q96FC9 970 aa16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 TSEN34Q9BSV6 310 aaKnown RBP16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 INCENPQ9NQS7 918 aa16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 FBXO40Q9UH90 709 aa16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 ANAPC4Q9UJX5 808 aa16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 SPTBN5Q9NRC6 3674 aaKnown RBP16.72■□□□□ 0.27
HMBOX1-209ENST00000522468 CHD9Q3L8U1 2897 aa16.71■□□□□ 0.27
HMBOX1-209ENST00000522468 TMEM232C9JQI7 657 aa16.71■□□□□ 0.27
HMBOX1-209ENST00000522468 DUSP11O75319 330 aaKnown RBP16.71■□□□□ 0.27
HMBOX1-209ENST00000522468 SLC3A2P08195 630 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms