RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 FOXP4Q8IVH2 680 aaPredicted RBP17.93■□□□□ 0.46
USP42-207ENST00000521713 CDHR2Q9BYE9 1310 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 RPAP1Q9BWH6 1393 aaPredicted RBP17.93■□□□□ 0.46
USP42-207ENST00000521713 H0YCG3 227 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 IQCGQ9H095 443 aaKnown RBP17.93■□□□□ 0.46
USP42-207ENST00000521713 GCNT3O95395 438 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 GJC1P36383 396 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 SPATS2Q86XZ4 545 aaKnown RBP17.93■□□□□ 0.46
USP42-207ENST00000521713 GUCA1BQ9UMX6 200 aa17.93■□□□□ 0.46
USP42-207ENST00000521713 GOLGA6CA6NDK9 693 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 OR52Z1P0C646 297 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 GOLGA6DP0CG33 693 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 DYNLL1P63167 89 aaKnown RBP17.92■□□□□ 0.46
USP42-207ENST00000521713 ATP11AP98196 1134 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 TXNRD1Q16881 649 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 ADALQ6DHV7 355 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 GOLGA6AQ9NYA3 693 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 MYO3BQ8WXR4 1341 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 PLEKHG2Q9H7P9 1386 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 AGLP35573 1532 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 ARHGAP6O43182 974 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 BRD1O95696 1058 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 TNFAIP3P21580 790 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 ATP5DP30049 168 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 MAP2K2P36507 400 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 PPP1R14CQ8TAE6 165 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 DEPTORQ8TB45 409 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 TPCN1Q9ULQ1 816 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 OSBPP22059 807 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 PDIA3P30101 505 aaKnown RBP17.92■□□□□ 0.46
USP42-207ENST00000521713 CLNS1AP54105 237 aaKnown RBP17.92■□□□□ 0.46
USP42-207ENST00000521713 DMTNQ08495 405 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 PLCD3Q8N3E9 789 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 RNF26Q9BY78 433 aaPredicted RBP17.92■□□□□ 0.46
USP42-207ENST00000521713 ANTXR1Q9H6X2 564 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 MAPK8IP1Q9UQF2 711 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 SSX2IPQ9Y2D8 614 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 NLRP12P59046 1061 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 PPFIA1Q13136 1202 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 BRD3Q15059 726 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 INF2Q27J81 1249 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 SELENOSQ9BQE4 189 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 TEKT3Q9BXF9 490 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 VPS16Q9H269 839 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 PCDHB13Q9Y5F0 798 aa17.92■□□□□ 0.46
USP42-207ENST00000521713 IGSF22Q8N9C0 903 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.91■□□□□ 0.46
USP42-207ENST00000521713 MYCBPQ99417 103 aaPredicted RBP17.91■□□□□ 0.46
USP42-207ENST00000521713 hCG_1984214I3L0E3 225 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 ZSCAN26Q16670 478 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 PODNQ7Z5L7 613 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 PLA2G4DQ86XP0 818 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 ZNF713Q8N859 430 aaPredicted RBP17.91■□□□□ 0.46
USP42-207ENST00000521713 ARHGEF1Q92888 912 aaKnown RBP17.91■□□□□ 0.46
USP42-207ENST00000521713 LMBRD1Q9NUN5 540 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 PALD1Q9ULE6 856 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 RASGRF1Q13972 1273 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 CCDC84Q86UT8 332 aaPredicted RBP17.91■□□□□ 0.46
USP42-207ENST00000521713 CMTR1Q8N1G2 835 aaKnown RBP17.91■□□□□ 0.46
USP42-207ENST00000521713 MED14O60244 1454 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 TMEM110-MUSTN1A8MSY1 372 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 CYP21A2P08686 494 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 SETSIPP0DME0 302 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 ZBTB8OSQ8IWT0 167 aa17.91■□□□□ 0.46
USP42-207ENST00000521713 GPR161Q8N6U8 529 aaKnown RBP17.91■□□□□ 0.46
USP42-207ENST00000521713 C21orf2O43822 256 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 IGKV5-2P06315 115 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 FERP16591 822 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 OAS2P29728 719 aaKnown RBP17.9■□□□□ 0.46
USP42-207ENST00000521713 ALDH3A1P30838 453 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 MXRA7P84157 204 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 TTC16Q8NEE8 873 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.9■□□□□ 0.46
USP42-207ENST00000521713 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 CLGNO14967 610 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 SASH1O94885 1247 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 IREB2P48200 963 aaKnown RBP17.9■□□□□ 0.46
USP42-207ENST00000521713 USP17L8P0C7I0 530 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 SH3BGRP55822 239 aaPredicted RBP17.9■□□□□ 0.46
USP42-207ENST00000521713 ZBTB16Q05516 673 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 GSTA5Q7RTV2 222 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 CACNA2D3Q8IZS8 1091 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 RPGRIP1Q96KN7 1286 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 CARD6Q9BX69 1037 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 MTUS1Q9ULD2 1270 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 SETBP1Q9Y6X0 1596 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 MTX1Q13505 466 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 APOA5Q6Q788 366 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 LCORLQ8N3X6 602 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 TRPC6Q9Y210 931 aa17.9■□□□□ 0.46
USP42-207ENST00000521713 DIP2CQ9Y2E4 1556 aa17.89■□□□□ 0.46
USP42-207ENST00000521713 BMP3P12645 472 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 LIN9Q5TKA1 542 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 DDX25Q9UHL0 483 aaKnown RBP17.89■□□□□ 0.45
USP42-207ENST00000521713 GNA14O95837 355 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 TRAPPC10P48553 1259 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 RUFY4Q6ZNE9 571 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 LARSQ9P2J5 1176 aaKnown RBP17.89■□□□□ 0.45
USP42-207ENST00000521713 ADD3Q9UEY8 706 aaKnown RBP17.89■□□□□ 0.45
USP42-207ENST00000521713 FBXO18Q8NFZ0 1043 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms