RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 PI16Q6UXB8 463 aa12.81□□□□□ -0.36
MRPS28-208ENST00000521605 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
MRPS28-208ENST00000521605 NSUN4Q96CB9 384 aaKnown RBP12.81□□□□□ -0.36
MRPS28-208ENST00000521605 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
MRPS28-208ENST00000521605 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.81□□□□□ -0.36
MRPS28-208ENST00000521605 PALD1Q9ULE6 856 aa12.81□□□□□ -0.36
MRPS28-208ENST00000521605 GOLIM4O00461 696 aa12.8□□□□□ -0.36
MRPS28-208ENST00000521605 CD2BP2O95400 341 aaKnown RBP12.8□□□□□ -0.36
MRPS28-208ENST00000521605 NEK4P51957 841 aa12.8□□□□□ -0.36
MRPS28-208ENST00000521605 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
MRPS28-208ENST00000521605 CLEC17AQ6ZS10 378 aa12.8□□□□□ -0.36
MRPS28-208ENST00000521605 SLC44A5Q8NCS7 719 aa12.8□□□□□ -0.36
MRPS28-208ENST00000521605 TGFBRAP1Q8WUH2 860 aa12.8□□□□□ -0.36
MRPS28-208ENST00000521605 TTC14Q96N46 770 aa12.8□□□□□ -0.36
MRPS28-208ENST00000521605 DNAJC2Q99543 621 aaKnown RBP12.8□□□□□ -0.36
MRPS28-208ENST00000521605 NOL10Q9BSC4 688 aaKnown RBP12.8□□□□□ -0.36
MRPS28-208ENST00000521605 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.8□□□□□ -0.36
MRPS28-208ENST00000521605 DHX36Q9H2U1 1008 aaKnown RBP12.8□□□□□ -0.36
MRPS28-208ENST00000521605 EPHX3Q9H6B9 360 aa12.8□□□□□ -0.36
MRPS28-208ENST00000521605 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
MRPS28-208ENST00000521605 SAP30BPQ9UHR5 308 aaKnown RBP12.8□□□□□ -0.36
MRPS28-208ENST00000521605 RBM8AQ9Y5S9 174 aaKnown RBP12.8□□□□□ -0.36
MRPS28-208ENST00000521605 CHD9Q3L8U1 2897 aa12.8□□□□□ -0.36
MRPS28-208ENST00000521605 REV3LO60673 3130 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 PGK1P00558 417 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 GH2P01242 217 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 IGHA2P01877 340 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 BMP1P13497 986 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 PDIA4P13667 645 aaKnown RBP12.79□□□□□ -0.36
MRPS28-208ENST00000521605 KCNQ1P51787 676 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 UBE3CQ15386 1083 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 OLFML2BQ68BL8 750 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 CATSPERGQ6ZRH7 1159 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 ALYREFQ86V81 257 aaKnown RBP12.79□□□□□ -0.36
MRPS28-208ENST00000521605 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
MRPS28-208ENST00000521605 XPNPEP3Q9NQH7 507 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 AATFQ9NY61 560 aaKnown RBP eCLIP12.79□□□□□ -0.36
MRPS28-208ENST00000521605 PHF24Q9UPV7 400 aa12.79□□□□□ -0.36
MRPS28-208ENST00000521605 A0A1W2PQ45 241 aaPredicted RBP12.78□□□□□ -0.36
MRPS28-208ENST00000521605 A0A1W2PQY0 241 aa12.78□□□□□ -0.36
MRPS28-208ENST00000521605 VCAM1P19320 739 aa12.78□□□□□ -0.36
MRPS28-208ENST00000521605 NUCB2P80303 420 aa12.78□□□□□ -0.36
MRPS28-208ENST00000521605 PTH1RQ03431 593 aa12.78□□□□□ -0.36
MRPS28-208ENST00000521605 FAAP100Q0VG06 881 aa12.78□□□□□ -0.36
MRPS28-208ENST00000521605 ANKRD1Q15327 319 aa12.78□□□□□ -0.36
MRPS28-208ENST00000521605 SKIV2LQ15477 1246 aaKnown RBP12.78□□□□□ -0.36
MRPS28-208ENST00000521605 FOXP4Q8IVH2 680 aaPredicted RBP12.78□□□□□ -0.36
MRPS28-208ENST00000521605 APPBP2Q92624 585 aa12.78□□□□□ -0.36
MRPS28-208ENST00000521605 NCOR1O75376 2440 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 FAM86C2PA6NEL3 165 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 SPDYE16A6NNV3 312 aaPredicted RBP12.77□□□□□ -0.37
MRPS28-208ENST00000521605 DCDC2CA8MYV0 355 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 SLC27A2O14975 620 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 COBLO75128 1261 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 HMGB1P09429 215 aaKnown RBP12.77□□□□□ -0.37
MRPS28-208ENST00000521605 ACRP10323 421 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 RARBP10826 455 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 PTMSP20962 102 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 MCAMP43121 646 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 RAB3GAP1Q15042 981 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 TMEM31Q5JXX7 168 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 RNF180Q86T96 592 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 ZNF589Q86UQ0 364 aaPredicted RBP12.77□□□□□ -0.37
MRPS28-208ENST00000521605 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 SPATA5Q8NB90 893 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 C12orf42Q96LP6 360 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 ZSCAN31Q96LW9 406 aaPredicted RBP12.77□□□□□ -0.37
MRPS28-208ENST00000521605 MOV10L1Q9BXT6 1211 aaKnown RBP12.77□□□□□ -0.37
MRPS28-208ENST00000521605 NKX2-4Q9H2Z4 354 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 RPAP3Q9H6T3 665 aaPredicted RBP12.77□□□□□ -0.37
MRPS28-208ENST00000521605 GINM1Q9NU53 330 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 CXXC1Q9P0U4 656 aaPredicted RBP12.77□□□□□ -0.37
MRPS28-208ENST00000521605 LRP2BPQ9P2M1 347 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 MSRAQ9UJ68 235 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
MRPS28-208ENST00000521605 CYP46A1Q9Y6A2 500 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 ZMYM6O95789 1325 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 FLT1P17948 1338 aa12.77□□□□□ -0.37
MRPS28-208ENST00000521605 ZNF236Q9UL36 1845 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 TIMP1P01033 207 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 HSP90AA1P07900 732 aaKnown RBP12.76□□□□□ -0.37
MRPS28-208ENST00000521605 ERCC3P19447 782 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 PLS1Q14651 629 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 NFKBIBQ15653 356 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 TMEM240Q5SV17 173 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 RUFY3Q7L099 469 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 C16orf59Q7L2K0 433 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 FBXL16Q8N461 479 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
MRPS28-208ENST00000521605 ACER1Q8TDN7 264 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 LENG1Q96BZ8 264 aaPredicted RBP12.76□□□□□ -0.37
MRPS28-208ENST00000521605 TMX3Q96JJ7 454 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 SLKQ9H2G2 1235 aaPredicted RBP12.76□□□□□ -0.37
MRPS28-208ENST00000521605 SH2B1Q9NRF2 756 aaPredicted RBP12.76□□□□□ -0.37
MRPS28-208ENST00000521605 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
MRPS28-208ENST00000521605 STRNO43815 780 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 BAG3O95817 575 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 HLA-DOAP06340 250 aa12.75□□□□□ -0.37
MRPS28-208ENST00000521605 CSF2RAP15509 400 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms