RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 RNGTTO60942 597 aaKnown RBP4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 NFIAQ12857 509 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 HSP90AA2PQ14568 343 aaPredicted RBP4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 PLEKHG6Q3KR16 790 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 SV2CQ496J9 727 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 SGO2Q562F6 1265 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 HEATR6Q6AI08 1181 aaKnown RBP4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 NIM1KQ8IY84 436 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 KREMEN2Q8NCW0 462 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 LRRN4CLQ8ND94 238 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 BVESQ8NE79 360 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 SLC7A14Q8TBB6 771 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 FBLIM1Q8WUP2 373 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 RNF141Q8WVD5 230 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 MFSD3Q96ES6 412 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 SCLYQ96I15 445 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 MYRFLQ96LU7 910 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 Q96M66 194 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 AARSD1Q9BTE6 412 aaKnown RBP4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 MRPL4Q9BYD3 311 aaKnown RBP4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 PRDM14Q9GZV8 571 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 WHRNQ9P202 907 aa4.95□□□□□ -1.62
HMGN1P28-201ENST00000521340 DNAJC25-GNG10A0A024R161 153 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 GSC2O15499 205 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 COBLO75128 1261 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 DNAJC8O75937 253 aaPredicted RBP4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 EYA4O95677 639 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 SCG5P05408 212 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 POU3F2P20265 443 aaPredicted RBP4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 CDKN1CP49918 316 aaPredicted RBP4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 UVSSAQ2YD98 709 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 SLC35F1Q5T1Q4 408 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 RNF43Q68DV7 783 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 FDX2Q6P4F2 183 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 FAM20CQ8IXL6 584 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 CCDC144CPQ8IYA2 1237 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 SYTL5Q8TDW5 730 aaPredicted RBP4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 UTP4Q969X6 686 aaKnown RBP4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 HEXIM2Q96MH2 286 aaKnown RBP4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 MCMBPQ9BTE3 642 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 MTFR1LQ9H019 292 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 IRF2BPLQ9H1B7 796 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 SLKQ9H2G2 1235 aaPredicted RBP4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 PIDD1Q9HB75 910 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 PRDM10Q9NQV6 1147 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 PICK1Q9NRD5 415 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 PRR13Q9NZ81 148 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 CGGBP1Q9UFW8 167 aaPredicted RBP4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 FHOD1Q9Y613 1164 aa4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 OAS3Q9Y6K5 1087 aaKnown RBP4.94□□□□□ -1.62
HMGN1P28-201ENST00000521340 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 LEFTY1O75610 366 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 SRFP11831 508 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 KCNA6P17658 529 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 GFRA1P56159 465 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 CLEC10AQ8IUN9 316 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 SHISA5Q8N114 240 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 AFAP1L2Q8N4X5 818 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 PRPF38AQ8NAV1 312 aaKnown RBP4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 MIPEPQ99797 713 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 FAM83CQ9BQN1 747 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 DUSP23Q9BVJ7 150 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 ASPNQ9BXN1 380 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 KRTAP9-9Q9BYP9 154 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 TYW1Q9NV66 732 aaKnown RBP4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 INTS7Q9NVH2 962 aaKnown RBP4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 KLHL42Q9P2K6 505 aa4.93□□□□□ -1.62
HMGN1P28-201ENST00000521340 ASXL2Q76L83 1435 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 IRS4O14654 1257 aaPredicted RBP4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 PRODHO43272 600 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 NAT2P11245 290 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 MYCLP1P12525 358 aaPredicted RBP4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 BMP3P12645 472 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 SPINK2P20155 84 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 IBSPP21815 317 aaPredicted RBP4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 CTSKP43235 329 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 GTF2IRD2BQ6EKJ0 949 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 NSMFQ6X4W1 530 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 C22orf34Q6ZV56 151 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 FGD2Q7Z6J4 655 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 STRA8Q7Z7C7 330 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 GTF2IRD2Q86UP8 949 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 DDX42Q86XP3 938 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 BTN2A2Q8WVV5 523 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 DDX1Q92499 740 aaKnown RBP4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 BRF1Q92994 677 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 DBNDD2Q9BQY9 259 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 IER2Q9BTL4 223 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 TARS2Q9BW92 718 aaKnown RBP4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 NKX2-4Q9H2Z4 354 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 GOLGA2P5Q9HBQ8 144 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 MINPP1Q9UNW1 487 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 AKT3Q9Y243 479 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 ATP8A1Q9Y2Q0 1164 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 DAGLAQ9Y4D2 1042 aa4.92□□□□□ -1.62
HMGN1P28-201ENST00000521340 PPM1BO75688 479 aa4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 PARNO95453 639 aaKnown RBP4.91□□□□□ -1.62
HMGN1P28-201ENST00000521340 PDGFRBP09619 1106 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms