RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 ZPBP2Q6X784 338 aa7.53□□□□□ -1.2
CLK4-207ENST00000520909 PLCD4Q9BRC7 762 aa7.53□□□□□ -1.2
CLK4-207ENST00000520909 GMIPQ9P107 970 aa7.53□□□□□ -1.2
CLK4-207ENST00000520909 VTI1BQ9UEU0 232 aa7.53□□□□□ -1.2
CLK4-207ENST00000520909 PCDHB14Q9Y5E9 798 aa7.53□□□□□ -1.2
CLK4-207ENST00000520909 OTOL1A6NHN0 477 aaPredicted RBP7.52□□□□□ -1.2
CLK4-207ENST00000520909 PRAMEF1O95521 474 aa7.52□□□□□ -1.2
CLK4-207ENST00000520909 GARTP22102 1010 aa7.52□□□□□ -1.2
CLK4-207ENST00000520909 ITGAEP38570 1179 aa7.52□□□□□ -1.2
CLK4-207ENST00000520909 TMEM62Q0P6H9 643 aa7.52□□□□□ -1.2
CLK4-207ENST00000520909 SNW1Q13573 536 aaKnown RBP7.52□□□□□ -1.2
CLK4-207ENST00000520909 BBS9Q3SYG4 887 aa7.52□□□□□ -1.2
CLK4-207ENST00000520909 ERICH6BQ5W0A0 696 aa7.52□□□□□ -1.2
CLK4-207ENST00000520909 CNKSR3Q6P9H4 555 aa7.52□□□□□ -1.2
CLK4-207ENST00000520909 DBX2Q6ZNG2 339 aa7.52□□□□□ -1.2
CLK4-207ENST00000520909 MZB1Q8WU39 189 aa7.52□□□□□ -1.2
CLK4-207ENST00000520909 FCRL2Q96LA5 508 aaPredicted RBP7.52□□□□□ -1.2
CLK4-207ENST00000520909 BRMS1Q9HCU9 246 aa7.52□□□□□ -1.2
CLK4-207ENST00000520909 FADS2P1A8MWK0 482 aa7.52□□□□□ -1.21
CLK4-207ENST00000520909 SIGLEC6O43699 453 aa7.52□□□□□ -1.21
CLK4-207ENST00000520909 ENDOUP21128 410 aaKnown RBP7.52□□□□□ -1.21
CLK4-207ENST00000520909 LAPTM5Q13571 262 aa7.52□□□□□ -1.21
CLK4-207ENST00000520909 CDCP2Q5VXM1 449 aa7.52□□□□□ -1.21
CLK4-207ENST00000520909 PRDM14Q9GZV8 571 aa7.52□□□□□ -1.21
CLK4-207ENST00000520909 EPB41L4AQ9HCS5 686 aaPredicted RBP7.52□□□□□ -1.21
CLK4-207ENST00000520909 TAF6LQ9Y6J9 622 aa7.52□□□□□ -1.21
CLK4-207ENST00000520909 IRS4O14654 1257 aaPredicted RBP7.51□□□□□ -1.21
CLK4-207ENST00000520909 CLEC3AO75596 197 aa7.51□□□□□ -1.21
CLK4-207ENST00000520909 ATE1O95260 518 aa7.51□□□□□ -1.21
CLK4-207ENST00000520909 CDR1P51861 262 aa7.51□□□□□ -1.21
CLK4-207ENST00000520909 HSF5Q4G112 596 aaPredicted RBP7.51□□□□□ -1.21
CLK4-207ENST00000520909 FBXL19Q6PCT2 694 aa7.51□□□□□ -1.21
CLK4-207ENST00000520909 LRRC3Q9BY71 257 aa7.51□□□□□ -1.21
CLK4-207ENST00000520909 CHST7Q9NS84 486 aa7.51□□□□□ -1.21
CLK4-207ENST00000520909 KBTBD4Q9NVX7 518 aa7.51□□□□□ -1.21
CLK4-207ENST00000520909 KLHL14Q9P2G3 628 aa7.51□□□□□ -1.21
CLK4-207ENST00000520909 POLR2BP30876 1174 aaKnown RBP7.5□□□□□ -1.21
CLK4-207ENST00000520909 CCNFP41002 786 aa7.5□□□□□ -1.21
CLK4-207ENST00000520909 RAB3GAP1Q15042 981 aa7.5□□□□□ -1.21
CLK4-207ENST00000520909 VMACQ2NL98 169 aa7.5□□□□□ -1.21
CLK4-207ENST00000520909 LDHDQ86WU2 507 aa7.5□□□□□ -1.21
CLK4-207ENST00000520909 FAM129CQ86XR2 697 aa7.5□□□□□ -1.21
CLK4-207ENST00000520909 SP8Q8IXZ3 490 aa7.5□□□□□ -1.21
CLK4-207ENST00000520909 FEZF2Q8TBJ5 459 aa7.5□□□□□ -1.21
CLK4-207ENST00000520909 CNNM2Q9H8M5 875 aa7.5□□□□□ -1.21
CLK4-207ENST00000520909 SUPT16HQ9Y5B9 1047 aaKnown RBP7.5□□□□□ -1.21
CLK4-207ENST00000520909 CELA3BP08861 270 aa7.49□□□□□ -1.21
CLK4-207ENST00000520909 PRKCAP17252 672 aa7.49□□□□□ -1.21
CLK4-207ENST00000520909 EIF4A3P38919 411 aaKnown RBP7.49□□□□□ -1.21
CLK4-207ENST00000520909 CYP4F8P98187 520 aa7.49□□□□□ -1.21
CLK4-207ENST00000520909 OVOS1Q6IE37 1185 aa7.49□□□□□ -1.21
CLK4-207ENST00000520909 DNAJC14Q6Y2X3 702 aaPredicted RBP7.49□□□□□ -1.21
CLK4-207ENST00000520909 FBXO33Q7Z6M2 555 aa7.49□□□□□ -1.21
CLK4-207ENST00000520909 TMEFF1Q8IYR6 380 aa7.49□□□□□ -1.21
CLK4-207ENST00000520909 ZDHHC14Q8IZN3 488 aa7.49□□□□□ -1.21
CLK4-207ENST00000520909 ATG4CQ96DT6 458 aa7.49□□□□□ -1.21
CLK4-207ENST00000520909 A0A1W2PQ45 241 aaPredicted RBP7.48□□□□□ -1.21
CLK4-207ENST00000520909 A0A1W2PQY0 241 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 GREM1O60565 184 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 KIR3DS1Q14943 382 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 NLRC3Q7RTR2 1065 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 TMC6Q7Z403 805 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 AEBP1Q8IUX7 1158 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 ZNF512BQ96KM6 892 aaPredicted RBP7.48□□□□□ -1.21
CLK4-207ENST00000520909 PWWP2AQ96N64 755 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 CDADC1Q9BWV3 514 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 EHMT1Q9H9B1 1298 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 KCNQ5Q9NR82 932 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 FBXL21Q9UKT6 434 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 MINPP1Q9UNW1 487 aa7.48□□□□□ -1.21
CLK4-207ENST00000520909 GPR55Q9Y2T6 319 aaPredicted RBP7.48□□□□□ -1.21
CLK4-207ENST00000520909 MEIS1O00470 390 aa7.47□□□□□ -1.21
CLK4-207ENST00000520909 SKOR2Q2VWA4 1001 aaPredicted RBP7.47□□□□□ -1.21
CLK4-207ENST00000520909 ERMP1Q7Z2K6 904 aa7.47□□□□□ -1.21
CLK4-207ENST00000520909 PRRT2Q7Z6L0 340 aaPredicted RBP7.47□□□□□ -1.21
CLK4-207ENST00000520909 IGDCC3Q8IVU1 814 aa7.47□□□□□ -1.21
CLK4-207ENST00000520909 LINC01356Q8N9X3 169 aa7.47□□□□□ -1.21
CLK4-207ENST00000520909 COPRSQ9NQ92 184 aa7.47□□□□□ -1.21
CLK4-207ENST00000520909 NUDT19A8MXV4 375 aa7.46□□□□□ -1.22
CLK4-207ENST00000520909 BMP8BP34820 402 aa7.46□□□□□ -1.22
CLK4-207ENST00000520909 NUP43Q8NFH3 380 aa7.46□□□□□ -1.22
CLK4-207ENST00000520909 ZNF296Q8WUU4 475 aaPredicted RBP7.46□□□□□ -1.22
CLK4-207ENST00000520909 MKRN2Q9H000 416 aaKnown RBP7.46□□□□□ -1.22
CLK4-207ENST00000520909 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
CLK4-207ENST00000520909 ERVK13-1Q9NX77 482 aa7.46□□□□□ -1.22
CLK4-207ENST00000520909 ACSL6Q9UKU0 697 aa7.46□□□□□ -1.22
CLK4-207ENST00000520909 PCDHB12Q9Y5F1 795 aa7.46□□□□□ -1.22
CLK4-207ENST00000520909 BUB1BO60566 1050 aaPredicted RBP7.45□□□□□ -1.22
CLK4-207ENST00000520909 TAGLNQ01995 201 aaKnown RBP7.45□□□□□ -1.22
CLK4-207ENST00000520909 CBX2Q14781 532 aaPredicted RBP7.45□□□□□ -1.22
CLK4-207ENST00000520909 LRRFIP1Q32MZ4 808 aaKnown RBP7.45□□□□□ -1.22
CLK4-207ENST00000520909 GK5Q6ZS86 529 aa7.45□□□□□ -1.22
CLK4-207ENST00000520909 SLCO6A1Q86UG4 719 aa7.45□□□□□ -1.22
CLK4-207ENST00000520909 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
CLK4-207ENST00000520909 GFOD1Q9NXC2 390 aa7.45□□□□□ -1.22
CLK4-207ENST00000520909 TIMELESSQ9UNS1 1208 aa7.45□□□□□ -1.22
CLK4-207ENST00000520909 PCDHA5Q9Y5H7 936 aa7.45□□□□□ -1.22
CLK4-207ENST00000520909 A0A1W2PQ27 194 aa7.44□□□□□ -1.22
CLK4-207ENST00000520909 A0A1W2PQ64 194 aa7.44□□□□□ -1.22
CLK4-207ENST00000520909 A0A1W2PQC6 194 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms