RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SPA17Q15506 151 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 GRIK5Q16478 980 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 FAM114A1Q8IWE2 563 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 TBC1D7Q9P0N9 293 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 LUC7L2Q9Y383 392 aaKnown RBP11.41□□□□□ -0.58
MCF2-209ENST00000520602 TACC3Q9Y6A5 838 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 ERCC5P28715 1186 aaPredicted RBP11.41□□□□□ -0.58
MCF2-209ENST00000520602 DNA2P51530 1060 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 CERKLQ49MI3 558 aaPredicted RBP11.41□□□□□ -0.58
MCF2-209ENST00000520602 TDRD12Q587J7 1177 aaKnown RBP11.41□□□□□ -0.58
MCF2-209ENST00000520602 EARS2Q5JPH6 523 aaKnown RBP11.41□□□□□ -0.58
MCF2-209ENST00000520602 ZNF569Q5MCW4 686 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 NBPF11Q86T75 865 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 CNGA4Q8IV77 575 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 COA1Q9GZY4 146 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 SPTLC3Q9NUV7 552 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 ARFGEF2Q9Y6D5 1785 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 SPATA31A6Q5VVP1 1343 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 FGFR1OPO95684 399 aaKnown RBP11.41□□□□□ -0.58
MCF2-209ENST00000520602 CCDC70Q6NSX1 233 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 TMCO3Q6UWJ1 677 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 PSTPIP2Q9H939 334 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 GDAQ9Y2T3 454 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 CNTNAP5Q8WYK1 1306 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 FMR1Q06787 632 aaKnown RBP eCLIP11.41□□□□□ -0.58
MCF2-209ENST00000520602 GRM4Q14833 912 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 TCERG1LQ5VWI1 586 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 GALNT17Q6IS24 598 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 PPP1R13BQ96KQ4 1090 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 RNF216Q9NWF9 866 aaPredicted RBP11.41□□□□□ -0.58
MCF2-209ENST00000520602 TUBE1Q9UJT0 475 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 GUCA1BQ9UMX6 200 aa11.41□□□□□ -0.58
MCF2-209ENST00000520602 KCNJ18B7U540 433 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 GDF11O95390 407 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 TTLL1O95922 423 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 RASA1P20936 1047 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 PDE4CQ08493 712 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 KCNJ12Q14500 433 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 ELF2Q15723 593 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 PKN1Q16512 942 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 SLC51AQ86UW1 340 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 VSTM4Q8IW00 320 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 SPICE1Q8N0Z3 855 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 BPIFA3Q9BQP9 254 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 POLLQ9UGP5 575 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 BICDL2A1A5D9 508 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 VEGFAP15692 232 aaPredicted RBP11.4□□□□□ -0.58
MCF2-209ENST00000520602 NPR1P16066 1061 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 UBE2SQ16763 222 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 LARGE2Q8N3Y3 721 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 NOC4LQ9BVI4 516 aaKnown RBP11.4□□□□□ -0.58
MCF2-209ENST00000520602 SLC39A2Q9NP94 309 aa11.4□□□□□ -0.58
MCF2-209ENST00000520602 DISP2A7MBM2 1401 aa11.4□□□□□ -0.59
MCF2-209ENST00000520602 TCP10L2B9ZVM9 353 aa11.4□□□□□ -0.59
MCF2-209ENST00000520602 ARMCX5Q6P1M9 558 aa11.4□□□□□ -0.59
MCF2-209ENST00000520602 CARD6Q9BX69 1037 aa11.4□□□□□ -0.59
MCF2-209ENST00000520602 LRRC4BQ9NT99 713 aa11.4□□□□□ -0.59
MCF2-209ENST00000520602 HDAC9Q9UKV0 1011 aa11.4□□□□□ -0.59
MCF2-209ENST00000520602 HPSEQ9Y251 543 aa11.4□□□□□ -0.59
MCF2-209ENST00000520602 DAGLAQ9Y4D2 1042 aa11.4□□□□□ -0.59
MCF2-209ENST00000520602 FLT1P17948 1338 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 MYO1BO43795 1136 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 AKR1B10O60218 316 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 AKR1B1P15121 316 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 SLC27A3Q5K4L6 730 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 SLFN13Q68D06 897 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 FOXP4Q8IVH2 680 aaPredicted RBP11.39□□□□□ -0.59
MCF2-209ENST00000520602 NEDD1Q8NHV4 660 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 TMEM260Q9NX78 707 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 STK32BQ9NY57 414 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 PUF60Q9UHX1 559 aaKnown RBP11.39□□□□□ -0.59
MCF2-209ENST00000520602 PPP2R2CQ9Y2T4 447 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 PCDHA1Q9Y5I3 950 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 CLRN2A0PK11 232 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 ETF1P62495 437 aaKnown RBP11.39□□□□□ -0.59
MCF2-209ENST00000520602 ATP2C1P98194 919 aaPredicted RBP11.39□□□□□ -0.59
MCF2-209ENST00000520602 GPS2Q13227 327 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 NAA30Q147X3 362 aaPredicted RBP11.39□□□□□ -0.59
MCF2-209ENST00000520602 RASGRP2Q7LDG7 609 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 FNBP4Q8N3X1 1017 aaPredicted RBP11.39□□□□□ -0.59
MCF2-209ENST00000520602 LRRC27Q9C0I9 530 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 USP54Q70EL1 1684 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 TRAF5O00463 557 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 CASP14P31944 242 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 SNAP25P60880 206 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 ICA1Q05084 483 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 TMC4Q7Z404 712 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 DRC1Q96MC2 740 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 SLF1Q9BQI6 1058 aa11.39□□□□□ -0.59
MCF2-209ENST00000520602 PLCG1P19174 1290 aa11.38□□□□□ -0.59
MCF2-209ENST00000520602 ARID5AQ03989 594 aa11.38□□□□□ -0.59
MCF2-209ENST00000520602 CNNM4Q6P4Q7 775 aa11.38□□□□□ -0.59
MCF2-209ENST00000520602 BARHL2Q9NY43 387 aa11.38□□□□□ -0.59
MCF2-209ENST00000520602 TEX33O43247 280 aa11.38□□□□□ -0.59
MCF2-209ENST00000520602 RBL2Q08999 1139 aa11.38□□□□□ -0.59
MCF2-209ENST00000520602 ASPRV1Q53RT3 343 aa11.38□□□□□ -0.59
MCF2-209ENST00000520602 ARL6IP4Q66PJ3 421 aaKnown RBP11.38□□□□□ -0.59
MCF2-209ENST00000520602 AMIGO3Q86WK7 504 aa11.38□□□□□ -0.59
MCF2-209ENST00000520602 SP8Q8IXZ3 490 aa11.38□□□□□ -0.59
MCF2-209ENST00000520602 FLAD1Q8NFF5 587 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms